RNA–Protein interactions for RNA: ENST00000538696.5

CLN6-202, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-202ENST00000538696 COL21A1Q96P44 957 aa15.87■□□□□ 0.13
CLN6-202ENST00000538696 RASL10BQ96S79 203 aa15.87■□□□□ 0.13
CLN6-202ENST00000538696 STACQ99469 402 aa15.87■□□□□ 0.13
CLN6-202ENST00000538696 PIGUQ9H490 435 aa15.87■□□□□ 0.13
CLN6-202ENST00000538696 ZNF451Q9Y4E5 1061 aa15.87■□□□□ 0.13
CLN6-202ENST00000538696 CACNA1GO43497 2377 aa15.86■□□□□ 0.13
CLN6-202ENST00000538696 A8MVJ9 347 aa15.86■□□□□ 0.13
CLN6-202ENST00000538696 hCG_2039718K7EN88 272 aa15.86■□□□□ 0.13
CLN6-202ENST00000538696 TO15178 435 aa15.86■□□□□ 0.13
CLN6-202ENST00000538696 CLOCKO15516 846 aa15.86■□□□□ 0.13
CLN6-202ENST00000538696 PEX1O43933 1283 aa15.86■□□□□ 0.13
CLN6-202ENST00000538696 DEAF1O75398 565 aaPredicted RBP15.86■□□□□ 0.13
CLN6-202ENST00000538696 OR2J2O76002 312 aa15.86■□□□□ 0.13
CLN6-202ENST00000538696 MFN2O95140 757 aa15.86■□□□□ 0.13
CLN6-202ENST00000538696 H6PDO95479 791 aa15.86■□□□□ 0.13
CLN6-202ENST00000538696 ITGB2P05107 769 aa15.86■□□□□ 0.13
CLN6-202ENST00000538696 GABRA3P34903 492 aa15.86■□□□□ 0.13
CLN6-202ENST00000538696 TRHRP34981 398 aaPredicted RBP15.86■□□□□ 0.13
CLN6-202ENST00000538696 ST13P50502 369 aaKnown RBP15.86■□□□□ 0.13
CLN6-202ENST00000538696 VLDLRP98155 873 aa15.86■□□□□ 0.13
CLN6-202ENST00000538696 ST3GAL2Q16842 350 aa15.86■□□□□ 0.13
CLN6-202ENST00000538696 IFI44LQ53G44 452 aa15.86■□□□□ 0.13
CLN6-202ENST00000538696 ACER2Q5QJU3 275 aa15.86■□□□□ 0.13
CLN6-202ENST00000538696 ATAD3BQ5T9A4 648 aa15.86■□□□□ 0.13
CLN6-202ENST00000538696 AGAP7PQ5VUJ5 663 aa15.86■□□□□ 0.13
CLN6-202ENST00000538696 PRAMEF8Q5VWM4 474 aa15.86■□□□□ 0.13
CLN6-202ENST00000538696 PRAMEF7Q5VXH5 474 aa15.86■□□□□ 0.13
CLN6-202ENST00000538696 C19orf48Q6RUI8 117 aa15.86■□□□□ 0.13
CLN6-202ENST00000538696 LYPD8Q6UX82 237 aa15.86■□□□□ 0.13
CLN6-202ENST00000538696 FKBP9P1Q75LS8 142 aa15.86■□□□□ 0.13
CLN6-202ENST00000538696 HMGN2P46Q86SG4 172 aa15.86■□□□□ 0.13
CLN6-202ENST00000538696 PRR22Q8IZ63 422 aa15.86■□□□□ 0.13
CLN6-202ENST00000538696 BEST3Q8N1M1 668 aa15.86■□□□□ 0.13
CLN6-202ENST00000538696 GPR32P1Q8NGA4 272 aa15.86■□□□□ 0.13
CLN6-202ENST00000538696 OR4N2Q8NGD1 307 aa15.86■□□□□ 0.13
CLN6-202ENST00000538696 GPR151Q8TDV0 419 aa15.86■□□□□ 0.13
CLN6-202ENST00000538696 PIK3R3Q92569 461 aa15.86■□□□□ 0.13
CLN6-202ENST00000538696 AGAP4Q96P64 663 aa15.86■□□□□ 0.13
CLN6-202ENST00000538696 RSPO3Q9BXY4 272 aaPredicted RBP15.86■□□□□ 0.13
CLN6-202ENST00000538696 SLC38A1Q9H2H9 487 aa15.86■□□□□ 0.13
CLN6-202ENST00000538696 VCX3BQ9H321 246 aa15.86■□□□□ 0.13
CLN6-202ENST00000538696 NTN4Q9HB63 628 aa15.86■□□□□ 0.13
CLN6-202ENST00000538696 Q9N2J8 555 aa15.86■□□□□ 0.13
CLN6-202ENST00000538696 DUSP22Q9NRW4 184 aa15.86■□□□□ 0.13
CLN6-202ENST00000538696 EXD2Q9NVH0 621 aa15.86■□□□□ 0.13
CLN6-202ENST00000538696 ABCG2Q9UNQ0 655 aa15.86■□□□□ 0.13
CLN6-202ENST00000538696 LIPT1Q9Y234 373 aa15.86■□□□□ 0.13
CLN6-202ENST00000538696 C15orf41Q9Y2V0 281 aa15.86■□□□□ 0.13
CLN6-202ENST00000538696 YARS2Q9Y2Z4 477 aaKnown RBP15.86■□□□□ 0.13
CLN6-202ENST00000538696 GPC6Q9Y625 555 aaPredicted RBP15.86■□□□□ 0.13
CLN6-202ENST00000538696 PRAMEF25A6NGN4 478 aa15.85■□□□□ 0.13
CLN6-202ENST00000538696 DUXAA6NLW8 204 aa15.85■□□□□ 0.13
CLN6-202ENST00000538696 ACOX3O15254 700 aa15.85■□□□□ 0.13
CLN6-202ENST00000538696 AGR2O95994 175 aa15.85■□□□□ 0.13
CLN6-202ENST00000538696 FABP3P05413 133 aa15.85■□□□□ 0.13
CLN6-202ENST00000538696 HOXB6P17509 224 aaKnown RBP15.85■□□□□ 0.13
CLN6-202ENST00000538696 AQP4P55087 323 aa15.85■□□□□ 0.13
CLN6-202ENST00000538696 CHRNEQ04844 493 aa15.85■□□□□ 0.13
CLN6-202ENST00000538696 GNA13Q14344 377 aa15.85■□□□□ 0.13
CLN6-202ENST00000538696 COL28A1Q2UY09 1125 aa15.85■□□□□ 0.13
CLN6-202ENST00000538696 CYP27C1Q4G0S4 372 aa15.85■□□□□ 0.13
CLN6-202ENST00000538696 IQCCQ4KMZ1 466 aa15.85■□□□□ 0.13
CLN6-202ENST00000538696 ABHD17BQ5VST6 288 aa15.85■□□□□ 0.13
CLN6-202ENST00000538696 ISLR2Q6UXK2 745 aa15.85■□□□□ 0.13
CLN6-202ENST00000538696 LINC00696Q6ZRV3 163 aa15.85■□□□□ 0.13
CLN6-202ENST00000538696 ARMC8Q8IUR7 673 aa15.85■□□□□ 0.13
CLN6-202ENST00000538696 SLC34A3Q8N130 599 aa15.85■□□□□ 0.13
CLN6-202ENST00000538696 COX18Q8N8Q8 333 aa15.85■□□□□ 0.13
CLN6-202ENST00000538696 CATSPER1Q8NEC5 780 aa15.85■□□□□ 0.13
CLN6-202ENST00000538696 SLC22A8Q8TCC7 542 aa15.85■□□□□ 0.13
CLN6-202ENST00000538696 SPPL2AQ8TCT8 520 aa15.85■□□□□ 0.13
CLN6-202ENST00000538696 LZICQ8WZA0 190 aa15.85■□□□□ 0.13
CLN6-202ENST00000538696 EME1Q96AY2 570 aa15.85■□□□□ 0.13
CLN6-202ENST00000538696 HSPBAP1Q96EW2 488 aa15.85■□□□□ 0.13
CLN6-202ENST00000538696 RMND5BQ96G75 393 aaPredicted RBP15.85■□□□□ 0.13
CLN6-202ENST00000538696 TRNT1Q96Q11 434 aaKnown RBP15.85■□□□□ 0.13
CLN6-202ENST00000538696 CIB1Q99828 191 aa15.85■□□□□ 0.13
CLN6-202ENST00000538696 COQ10BQ9H8M1 238 aa15.85■□□□□ 0.13
CLN6-202ENST00000538696 IL1RAPQ9NPH3 570 aa15.85■□□□□ 0.13
CLN6-202ENST00000538696 VNN3Q9NY84 501 aa15.85■□□□□ 0.13
CLN6-202ENST00000538696 DNAJB9Q9UBS3 223 aa15.85■□□□□ 0.13
CLN6-202ENST00000538696 CBLCQ9ULV8 474 aa15.85■□□□□ 0.13
CLN6-202ENST00000538696 OR10H1Q9Y4A9 318 aa15.85■□□□□ 0.13
CLN6-202ENST00000538696 EML6Q6ZMW3 1958 aa15.85■□□□□ 0.13
CLN6-202ENST00000538696 A0A0G2JPF8 293 aa15.84■□□□□ 0.13
CLN6-202ENST00000538696 HNRNPCL2B2RXH8 293 aa15.84■□□□□ 0.13
CLN6-202ENST00000538696 HNRNPCL3B7ZW38 293 aa15.84■□□□□ 0.13
CLN6-202ENST00000538696 DIRAS1O95057 198 aa15.84■□□□□ 0.13
CLN6-202ENST00000538696 PRSS23O95084 383 aa15.84■□□□□ 0.13
CLN6-202ENST00000538696 CST1P01037 141 aa15.84■□□□□ 0.13
CLN6-202ENST00000538696 HNRNPCL4P0DMR1 293 aa15.84■□□□□ 0.13
CLN6-202ENST00000538696 ABCD3P28288 659 aa15.84■□□□□ 0.13
CLN6-202ENST00000538696 SOX3P41225 446 aa15.84■□□□□ 0.13
CLN6-202ENST00000538696 SSR4P51571 173 aa15.84■□□□□ 0.13
CLN6-202ENST00000538696 PLCXD2Q0VAA5 305 aa15.84■□□□□ 0.13
CLN6-202ENST00000538696 MFAP5Q13361 173 aa15.84■□□□□ 0.13
CLN6-202ENST00000538696 DUSP7Q16829 419 aa15.84■□□□□ 0.13
CLN6-202ENST00000538696 ARHGAP11BQ3KRB8 267 aa15.84■□□□□ 0.13
CLN6-202ENST00000538696 LINC00303Q3SY05 128 aa15.84■□□□□ 0.13
CLN6-202ENST00000538696 CCNJQ5T5M9 372 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms