RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 PHF1O43189 567 aaPredicted RBP12.51□□□□□ -0.41
SMARCA4-206ENST00000538456 CXCL13O43927 109 aa12.51□□□□□ -0.41
SMARCA4-206ENST00000538456 ADAM11O75078 769 aa12.51□□□□□ -0.41
SMARCA4-206ENST00000538456 NDUFS7O75251 213 aa12.51□□□□□ -0.41
SMARCA4-206ENST00000538456 IGHV4-39P01824 125 aa12.51□□□□□ -0.41
SMARCA4-206ENST00000538456 JUNP05412 331 aaKnown RBP12.51□□□□□ -0.41
SMARCA4-206ENST00000538456 MPIP34949 423 aa12.51□□□□□ -0.41
SMARCA4-206ENST00000538456 CLK3P49761 638 aaKnown RBP12.51□□□□□ -0.41
SMARCA4-206ENST00000538456 RAE1P78406 368 aaKnown RBP12.51□□□□□ -0.41
SMARCA4-206ENST00000538456 CYP27C1Q4G0S4 372 aa12.51□□□□□ -0.41
SMARCA4-206ENST00000538456 TMEM107Q6UX40 140 aa12.51□□□□□ -0.41
SMARCA4-206ENST00000538456 ZDHHC24Q6UX98 284 aa12.51□□□□□ -0.41
SMARCA4-206ENST00000538456 ATG4DQ86TL0 474 aaPredicted RBP12.51□□□□□ -0.41
SMARCA4-206ENST00000538456 CDC26Q8NHZ8 85 aa12.51□□□□□ -0.41
SMARCA4-206ENST00000538456 SMAP2Q8WU79 429 aaPredicted RBP12.51□□□□□ -0.41
SMARCA4-206ENST00000538456 TMEM185BQ9H7F4 350 aa12.51□□□□□ -0.41
SMARCA4-206ENST00000538456 STOML1Q9UBI4 398 aa12.51□□□□□ -0.41
SMARCA4-206ENST00000538456 DMGDHQ9UI17 866 aaKnown RBP12.51□□□□□ -0.41
SMARCA4-206ENST00000538456 ZNF225Q9UK10 706 aa12.51□□□□□ -0.41
SMARCA4-206ENST00000538456 GPR52Q9Y2T5 361 aa12.51□□□□□ -0.41
SMARCA4-206ENST00000538456 UTP11Q9Y3A2 253 aaKnown RBP12.51□□□□□ -0.41
SMARCA4-206ENST00000538456 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.5□□□□□ -0.413e-9■■■□□ 16.9
SMARCA4-206ENST00000538456 A0A1W2PP18 115 aa12.5□□□□□ -0.41
SMARCA4-206ENST00000538456 A8MV72 311 aaPredicted RBP12.5□□□□□ -0.41
SMARCA4-206ENST00000538456 TNFSF11O14788 317 aa12.5□□□□□ -0.41
SMARCA4-206ENST00000538456 UTS2O95399 124 aa12.5□□□□□ -0.41
SMARCA4-206ENST00000538456 SYNGR4O95473 234 aa12.5□□□□□ -0.41
SMARCA4-206ENST00000538456 ANGPTL1O95841 491 aa12.5□□□□□ -0.41
SMARCA4-206ENST00000538456 CD3EP07766 207 aa12.5□□□□□ -0.41
SMARCA4-206ENST00000538456 DANCRP0C864 163 aa12.5□□□□□ -0.41
SMARCA4-206ENST00000538456 PSMB1P20618 241 aaKnown RBP12.5□□□□□ -0.41
SMARCA4-206ENST00000538456 AGTR1P30556 359 aa12.5□□□□□ -0.41
SMARCA4-206ENST00000538456 NCBP2P52298 156 aaKnown RBP eCLIP12.5□□□□□ -0.41
SMARCA4-206ENST00000538456 CAV1Q03135 178 aa12.5□□□□□ -0.41
SMARCA4-206ENST00000538456 ACSM2AQ08AH3 577 aa12.5□□□□□ -0.41
SMARCA4-206ENST00000538456 HEPACAMQ14CZ8 416 aa12.5□□□□□ -0.41
SMARCA4-206ENST00000538456 TMEM44Q2T9K0 475 aa12.5□□□□□ -0.41
SMARCA4-206ENST00000538456 GLYR1Q49A26 553 aaPredicted RBP12.5□□□□□ -0.41
SMARCA4-206ENST00000538456 UBAP2Q5T6F2 1119 aaKnown RBP12.5□□□□□ -0.41
SMARCA4-206ENST00000538456 ACSM2BQ68CK6 577 aa12.5□□□□□ -0.41
SMARCA4-206ENST00000538456 ADAM5Q6NVV9 412 aa12.5□□□□□ -0.41
SMARCA4-206ENST00000538456 GALNT10Q86SR1 603 aa12.5□□□□□ -0.41
SMARCA4-206ENST00000538456 WDR75Q8IWA0 830 aaKnown RBP12.5□□□□□ -0.41
SMARCA4-206ENST00000538456 C16orf78Q8WTQ4 265 aa12.5□□□□□ -0.41
SMARCA4-206ENST00000538456 NPAS1Q99742 590 aa12.5□□□□□ -0.41
SMARCA4-206ENST00000538456 ACPTQ9BZG2 426 aa12.5□□□□□ -0.41
SMARCA4-206ENST00000538456 Q9N2J8 555 aa12.5□□□□□ -0.41
SMARCA4-206ENST00000538456 DDX18Q9NVP1 670 aaKnown RBP12.5□□□□□ -0.41
SMARCA4-206ENST00000538456 GDF2Q9UK05 429 aaPredicted RBP12.5□□□□□ -0.41
SMARCA4-206ENST00000538456 ALPK2Q86TB3 2170 aa12.5□□□□□ -0.41
SMARCA4-206ENST00000538456 A8MT66 165 aa12.49□□□□□ -0.41
SMARCA4-206ENST00000538456 NTN1O95631 604 aa12.49□□□□□ -0.41
SMARCA4-206ENST00000538456 IL33O95760 270 aa12.49□□□□□ -0.41
SMARCA4-206ENST00000538456 KRT6AP02538 564 aa12.49□□□□□ -0.41
SMARCA4-206ENST00000538456 KRT6BP04259 564 aa12.49□□□□□ -0.41
SMARCA4-206ENST00000538456 TUBBP07437 444 aa12.49□□□□□ -0.41
SMARCA4-206ENST00000538456 IL11P20809 199 aa12.49□□□□□ -0.41
SMARCA4-206ENST00000538456 KRT6CP48668 564 aa12.49□□□□□ -0.41
SMARCA4-206ENST00000538456 GUCY2DQ02846 1103 aa12.49□□□□□ -0.41
SMARCA4-206ENST00000538456 C17orf67Q0P5P2 114 aa12.49□□□□□ -0.41
SMARCA4-206ENST00000538456 CSTF3Q12996 717 aaKnown RBP12.49□□□□□ -0.41
SMARCA4-206ENST00000538456 ZNHIT3Q15649 155 aaPredicted RBP12.49□□□□□ -0.41
SMARCA4-206ENST00000538456 PRSS53Q2L4Q9 553 aa12.49□□□□□ -0.41
SMARCA4-206ENST00000538456 GRAMD1BQ3KR37 738 aa12.49□□□□□ -0.41
SMARCA4-206ENST00000538456 ZNF672Q499Z4 452 aaPredicted RBP12.49□□□□□ -0.41
SMARCA4-206ENST00000538456 NCMAPQ5T1S8 102 aa12.49□□□□□ -0.41
SMARCA4-206ENST00000538456 MFSD12Q6NUT3 480 aa12.49□□□□□ -0.41
SMARCA4-206ENST00000538456 FIGNL1Q6PIW4 674 aa12.49□□□□□ -0.41
SMARCA4-206ENST00000538456 APOOLQ6UXV4 268 aa12.49□□□□□ -0.41
SMARCA4-206ENST00000538456 GATSQ8NAP1 163 aa12.49□□□□□ -0.41
SMARCA4-206ENST00000538456 SPATA4Q8NEY3 305 aa12.49□□□□□ -0.41
SMARCA4-206ENST00000538456 STEAP2Q8NFT2 490 aa12.49□□□□□ -0.41
SMARCA4-206ENST00000538456 KBTBD8Q8NFY9 601 aa12.49□□□□□ -0.41
SMARCA4-206ENST00000538456 APIPQ96GX9 242 aa12.49□□□□□ -0.41
SMARCA4-206ENST00000538456 ADGRG7Q96K78 797 aa12.49□□□□□ -0.41
SMARCA4-206ENST00000538456 HS6ST2Q96MM7 605 aa12.49□□□□□ -0.41
SMARCA4-206ENST00000538456 OR10A4Q9H209 315 aa12.49□□□□□ -0.41
SMARCA4-206ENST00000538456 ESRP2Q9H6T0 727 aaKnown RBP12.49□□□□□ -0.41
SMARCA4-206ENST00000538456 PAQR5Q9NXK6 330 aaPredicted RBP12.49□□□□□ -0.41
SMARCA4-206ENST00000538456 MRTO4Q9UKD2 239 aaKnown RBP12.49□□□□□ -0.41
SMARCA4-206ENST00000538456 A0A087WV62 115 aa12.48□□□□□ -0.41
SMARCA4-206ENST00000538456 IGLV3-32A0A0A0MS00 114 aa12.48□□□□□ -0.41
SMARCA4-206ENST00000538456 KIF2AO00139 706 aaPredicted RBP12.48□□□□□ -0.41
SMARCA4-206ENST00000538456 UPK1AO00322 258 aa12.48□□□□□ -0.41
SMARCA4-206ENST00000538456 NDUFB5O43674 189 aa12.48□□□□□ -0.41
SMARCA4-206ENST00000538456 GPRIN2O60269 458 aa12.48□□□□□ -0.41
SMARCA4-206ENST00000538456 HSD3B1P14060 373 aa12.48□□□□□ -0.41
SMARCA4-206ENST00000538456 ZNF17P17021 662 aa12.48□□□□□ -0.41
SMARCA4-206ENST00000538456 IL32P24001 234 aa12.48□□□□□ -0.41
SMARCA4-206ENST00000538456 HSD3B2P26439 372 aa12.48□□□□□ -0.41
SMARCA4-206ENST00000538456 TIA1P31483 386 aaKnown RBP eCLIP12.48□□□□□ -0.41
SMARCA4-206ENST00000538456 HTR6P50406 440 aa12.48□□□□□ -0.41
SMARCA4-206ENST00000538456 CLCQ05315 142 aa12.48□□□□□ -0.41
SMARCA4-206ENST00000538456 BTKQ06187 659 aa12.48□□□□□ -0.41
SMARCA4-206ENST00000538456 BSPH1Q075Z2 132 aa12.48□□□□□ -0.41
SMARCA4-206ENST00000538456 TAB1Q15750 504 aa12.48□□□□□ -0.41
SMARCA4-206ENST00000538456 TSNAXIP1Q2TAA8 658 aa12.48□□□□□ -0.41
SMARCA4-206ENST00000538456 PGGHGQ32M88 737 aa12.48□□□□□ -0.41
SMARCA4-206ENST00000538456 SPIN4Q56A73 249 aa12.48□□□□□ -0.41
SMARCA4-206ENST00000538456 HBMQ6B0K9 141 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms