RNA–Protein interactions for RNA: ENST00000537435.2

USP44-203, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-203ENST00000537435 LRRC25Q8N386 305 aaPredicted RBP13.36□□□□□ -0.27
USP44-203ENST00000537435 Q8N402 240 aa13.36□□□□□ -0.27
USP44-203ENST00000537435 C19orf18Q8NEA5 215 aa13.36□□□□□ -0.27
USP44-203ENST00000537435 OR52N1Q8NH53 320 aa13.36□□□□□ -0.27
USP44-203ENST00000537435 OR14C36Q8NHC7 312 aa13.36□□□□□ -0.27
USP44-203ENST00000537435 GAL3ST3Q96A11 431 aa13.36□□□□□ -0.27
USP44-203ENST00000537435 MS4A4EQ96PG1 132 aa13.36□□□□□ -0.27
USP44-203ENST00000537435 COQ7Q99807 217 aa13.36□□□□□ -0.27
USP44-203ENST00000537435 SOSTQ9BQB4 213 aa13.36□□□□□ -0.27
USP44-203ENST00000537435 RANGRFQ9HD47 186 aaPredicted RBP13.36□□□□□ -0.27
USP44-203ENST00000537435 WDR70Q9NW82 654 aa13.36□□□□□ -0.27
USP44-203ENST00000537435 NLGN3Q9NZ94 848 aa13.36□□□□□ -0.27
USP44-203ENST00000537435 TNFRSF10DQ9UBN6 386 aa13.36□□□□□ -0.27
USP44-203ENST00000537435 BOLA1Q9Y3E2 137 aa13.36□□□□□ -0.27
USP44-203ENST00000537435 WDR45Q9Y484 360 aa13.36□□□□□ -0.27
USP44-203ENST00000537435 SNRNP200O75643 2136 aaKnown RBP13.36□□□□□ -0.27
USP44-203ENST00000537435 C2orf92A0A1B0GVN3 265 aa13.36□□□□□ -0.27
USP44-203ENST00000537435 HCN1O60741 890 aa13.36□□□□□ -0.27
USP44-203ENST00000537435 KCNJ13O60928 360 aa13.36□□□□□ -0.27
USP44-203ENST00000537435 GCGRP47871 477 aa13.36□□□□□ -0.27
USP44-203ENST00000537435 ACSM1Q08AH1 577 aa13.36□□□□□ -0.27
USP44-203ENST00000537435 VASNQ6EMK4 673 aa13.36□□□□□ -0.27
USP44-203ENST00000537435 B3GLCTQ6Y288 498 aa13.36□□□□□ -0.27
USP44-203ENST00000537435 ABI3BPQ7Z7G0 1075 aa13.36□□□□□ -0.27
USP44-203ENST00000537435 KLBQ86Z14 1044 aa13.36□□□□□ -0.27
USP44-203ENST00000537435 CPOQ8IVL8 374 aa13.36□□□□□ -0.27
USP44-203ENST00000537435 TRIM48Q8IWZ4 208 aa13.36□□□□□ -0.27
USP44-203ENST00000537435 OR4N5Q8IXE1 308 aa13.36□□□□□ -0.27
USP44-203ENST00000537435 PEX5LQ8IYB4 626 aa13.36□□□□□ -0.27
USP44-203ENST00000537435 SIRT6Q8N6T7 355 aa13.36□□□□□ -0.27
USP44-203ENST00000537435 UBASH3BQ8TF42 649 aa13.36□□□□□ -0.27
USP44-203ENST00000537435 DNAJA4Q8WW22 397 aaPredicted RBP13.36□□□□□ -0.27
USP44-203ENST00000537435 FYTTD1Q96QD9 318 aaKnown RBP13.36□□□□□ -0.27
USP44-203ENST00000537435 APOOQ9BUR5 198 aa13.36□□□□□ -0.27
USP44-203ENST00000537435 SLC17A9Q9BYT1 436 aa13.36□□□□□ -0.27
USP44-203ENST00000537435 KIR3DX1Q9H7L2 352 aa13.36□□□□□ -0.27
USP44-203ENST00000537435 MTHFD2LQ9H903 347 aaPredicted RBP13.36□□□□□ -0.27
USP44-203ENST00000537435 CDH23Q9H251 3354 aa13.36□□□□□ -0.27
USP44-203ENST00000537435 CENPVL1A0A0U1RR11 272 aa13.35□□□□□ -0.27
USP44-203ENST00000537435 RNGTTO60942 597 aaKnown RBP13.35□□□□□ -0.27
USP44-203ENST00000537435 HMGN1P05114 100 aa13.35□□□□□ -0.27
USP44-203ENST00000537435 CPN2P22792 545 aa13.35□□□□□ -0.27
USP44-203ENST00000537435 MAP2K3P46734 347 aa13.35□□□□□ -0.27
USP44-203ENST00000537435 IL18Q14116 193 aa13.35□□□□□ -0.27
USP44-203ENST00000537435 CDK10Q15131 360 aa13.35□□□□□ -0.27
USP44-203ENST00000537435 EOGTQ5NDL2 527 aa13.35□□□□□ -0.27
USP44-203ENST00000537435 ZNF322Q6U7Q0 402 aaPredicted RBP13.35□□□□□ -0.27
USP44-203ENST00000537435 AMIGO1Q86WK6 493 aa13.35□□□□□ -0.27
USP44-203ENST00000537435 PAQR7Q86WK9 346 aa13.35□□□□□ -0.27
USP44-203ENST00000537435 OR51G2Q8NGK0 314 aa13.35□□□□□ -0.27
USP44-203ENST00000537435 LCN9Q8WX39 176 aa13.35□□□□□ -0.27
USP44-203ENST00000537435 ARMC5Q96C12 935 aa13.35□□□□□ -0.27
USP44-203ENST00000537435 BEX2Q9BXY8 128 aa13.35□□□□□ -0.27
USP44-203ENST00000537435 CACYBPQ9HB71 228 aaKnown RBP13.35□□□□□ -0.27
USP44-203ENST00000537435 FGF22Q9HCT0 170 aa13.35□□□□□ -0.27
USP44-203ENST00000537435 OBP2AQ9NY56 170 aa13.35□□□□□ -0.27
USP44-203ENST00000537435 ZNF232Q9UNY5 417 aa13.35□□□□□ -0.27
USP44-203ENST00000537435 POLHQ9Y253 713 aa13.35□□□□□ -0.27
USP44-203ENST00000537435 KIAA0100Q14667 2235 aaKnown RBP13.35□□□□□ -0.27
USP44-203ENST00000537435 TBC1D3KA0A087X1G2 549 aa13.35□□□□□ -0.27
USP44-203ENST00000537435 TBC1D3FA6NER0 549 aaPredicted RBP13.35□□□□□ -0.27
USP44-203ENST00000537435 HLA-DQB1P01920 261 aa13.35□□□□□ -0.27
USP44-203ENST00000537435 APODP05090 189 aa13.35□□□□□ -0.27
USP44-203ENST00000537435 EVX1P49640 407 aa13.35□□□□□ -0.27
USP44-203ENST00000537435 RACK1P63244 317 aaKnown RBP13.35□□□□□ -0.27
USP44-203ENST00000537435 TNFRSF17Q02223 184 aa13.35□□□□□ -0.27
USP44-203ENST00000537435 RGS1Q08116 209 aa13.35□□□□□ -0.27
USP44-203ENST00000537435 FZD5Q13467 585 aa13.35□□□□□ -0.27
USP44-203ENST00000537435 DUSP5Q16690 384 aa13.35□□□□□ -0.27
USP44-203ENST00000537435 CCNJQ5T5M9 372 aa13.35□□□□□ -0.27
USP44-203ENST00000537435 TBC1D3GQ6DHY5 549 aa13.35□□□□□ -0.27
USP44-203ENST00000537435 PLET1Q6UQ28 207 aa13.35□□□□□ -0.27
USP44-203ENST00000537435 CXXC5Q7LFL8 322 aaKnown RBP13.35□□□□□ -0.27
USP44-203ENST00000537435 ASPGQ86U10 573 aa13.35□□□□□ -0.27
USP44-203ENST00000537435 GLCCI1Q86VQ1 547 aa13.35□□□□□ -0.27
USP44-203ENST00000537435 ASCC1Q8N9N2 400 aaKnown RBP13.35□□□□□ -0.27
USP44-203ENST00000537435 SENP5Q96HI0 755 aaPredicted RBP13.35□□□□□ -0.27
USP44-203ENST00000537435 RNF32Q9H0A6 362 aa13.35□□□□□ -0.27
USP44-203ENST00000537435 UBQLN3Q9H347 655 aa13.35□□□□□ -0.27
USP44-203ENST00000537435 B3GAT2Q9NPZ5 323 aa13.35□□□□□ -0.27
USP44-203ENST00000537435 ASB6Q9NWX5 421 aa13.35□□□□□ -0.27
USP44-203ENST00000537435 COLEC10Q9Y6Z7 277 aa13.35□□□□□ -0.27
USP44-203ENST00000537435 MDC1Q14676 2089 aaKnown RBP13.35□□□□□ -0.27
USP44-203ENST00000537435 DVL2O14641 736 aa13.34□□□□□ -0.27
USP44-203ENST00000537435 EML2O95834 649 aa13.34□□□□□ -0.27
USP44-203ENST00000537435 ZGLP1P0C6A0 271 aa13.34□□□□□ -0.27
USP44-203ENST00000537435 GAAP10253 952 aa13.34□□□□□ -0.27
USP44-203ENST00000537435 RPS15AP62244 130 aaKnown RBP13.34□□□□□ -0.27
USP44-203ENST00000537435 SIM1P81133 766 aaPredicted RBP13.34□□□□□ -0.27
USP44-203ENST00000537435 ENPP2Q13822 863 aa13.34□□□□□ -0.27
USP44-203ENST00000537435 GPR68Q15743 365 aa13.34□□□□□ -0.27
USP44-203ENST00000537435 ARHGAP11BQ3KRB8 267 aa13.34□□□□□ -0.27
USP44-203ENST00000537435 PLBD1Q6P4A8 553 aa13.34□□□□□ -0.27
USP44-203ENST00000537435 METAP1DQ6UB28 335 aaPredicted RBP13.34□□□□□ -0.27
USP44-203ENST00000537435 TMEM91Q6ZNR0 172 aa13.34□□□□□ -0.27
USP44-203ENST00000537435 NLGN4YQ8NFZ3 816 aaPredicted RBP13.34□□□□□ -0.27
USP44-203ENST00000537435 ZCCHC10Q8TBK6 192 aa13.34□□□□□ -0.27
USP44-203ENST00000537435 ZFPM2Q8WW38 1151 aa13.34□□□□□ -0.27
USP44-203ENST00000537435 NACC2Q96BF6 587 aa13.34□□□□□ -0.27
USP44-203ENST00000537435 PLA2G2FQ9BZM2 168 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms