RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 C9JVG2 144 aa16.26■□□□□ 0.19
TNFRSF1A-209ENST00000536717 CCDC22O60826 627 aa16.26■□□□□ 0.19
TNFRSF1A-209ENST00000536717 IL6P05231 212 aa16.26■□□□□ 0.19
TNFRSF1A-209ENST00000536717 PGRP06401 933 aa16.26■□□□□ 0.19
TNFRSF1A-209ENST00000536717 HOXD4P09016 255 aaPredicted RBP16.26■□□□□ 0.19
TNFRSF1A-209ENST00000536717 CYP4B1P13584 511 aa16.26■□□□□ 0.19
TNFRSF1A-209ENST00000536717 COX6B1P14854 86 aa16.26■□□□□ 0.19
TNFRSF1A-209ENST00000536717 BMP7P18075 431 aa16.26■□□□□ 0.19
TNFRSF1A-209ENST00000536717 IL12AP29459 219 aa16.26■□□□□ 0.19
TNFRSF1A-209ENST00000536717 GPC1P35052 558 aa16.26■□□□□ 0.19
TNFRSF1A-209ENST00000536717 POLR2JP52435 117 aaKnown RBP16.26■□□□□ 0.19
TNFRSF1A-209ENST00000536717 GAS1P54826 345 aa16.26■□□□□ 0.19
TNFRSF1A-209ENST00000536717 TFF3Q07654 80 aa16.26■□□□□ 0.19
TNFRSF1A-209ENST00000536717 DCST1Q5T197 706 aa16.26■□□□□ 0.19
TNFRSF1A-209ENST00000536717 GKAP1Q5VSY0 366 aaPredicted RBP16.26■□□□□ 0.19
TNFRSF1A-209ENST00000536717 ANXA8L1Q5VT79 327 aa16.26■□□□□ 0.19
TNFRSF1A-209ENST00000536717 OR4F3Q6IEY1 312 aa16.26■□□□□ 0.19
TNFRSF1A-209ENST00000536717 SEM1Q6ZVN7 128 aa16.26■□□□□ 0.19
TNFRSF1A-209ENST00000536717 YRDCQ86U90 279 aaKnown RBP16.26■□□□□ 0.19
TNFRSF1A-209ENST00000536717 OR10Q1Q8NGQ4 319 aa16.26■□□□□ 0.19
TNFRSF1A-209ENST00000536717 UGT2B28Q9BY64 529 aa16.26■□□□□ 0.19
TNFRSF1A-209ENST00000536717 PRDM14Q9GZV8 571 aa16.26■□□□□ 0.19
TNFRSF1A-209ENST00000536717 ENKD1Q9H0I2 346 aa16.26■□□□□ 0.19
TNFRSF1A-209ENST00000536717 ZNF385DQ9H6B1 395 aa16.26■□□□□ 0.19
TNFRSF1A-209ENST00000536717 FAM120CQ9NX05 1096 aaKnown RBP16.26■□□□□ 0.19
TNFRSF1A-209ENST00000536717 CCDC167Q9P0B6 97 aa16.26■□□□□ 0.19
TNFRSF1A-209ENST00000536717 Q9UFV3 132 aa16.26■□□□□ 0.19
TNFRSF1A-209ENST00000536717 CBLCQ9ULV8 474 aa16.26■□□□□ 0.19
TNFRSF1A-209ENST00000536717 MPDZO75970 2070 aa16.26■□□□□ 0.19
TNFRSF1A-209ENST00000536717 TACC2O95359 2948 aa16.26■□□□□ 0.19
TNFRSF1A-209ENST00000536717 NKX2-6A6NCS4 301 aa16.25■□□□□ 0.19
TNFRSF1A-209ENST00000536717 FAM90A27PA6NNH2 459 aa16.25■□□□□ 0.19
TNFRSF1A-209ENST00000536717 KDM4EB2RXH2 506 aaPredicted RBP16.25■□□□□ 0.19
TNFRSF1A-209ENST00000536717 CBR3O75828 277 aa16.25■□□□□ 0.19
TNFRSF1A-209ENST00000536717 PTGER4P35408 488 aa16.25■□□□□ 0.19
TNFRSF1A-209ENST00000536717 MLC1Q15049 377 aa16.25■□□□□ 0.19
TNFRSF1A-209ENST00000536717 CYP27C1Q4G0S4 372 aa16.25■□□□□ 0.19
TNFRSF1A-209ENST00000536717 AGKQ53H12 422 aa16.25■□□□□ 0.19
TNFRSF1A-209ENST00000536717 PLCZ1Q86YW0 608 aa16.25■□□□□ 0.19
TNFRSF1A-209ENST00000536717 HOXB13Q92826 284 aaPredicted RBP16.25■□□□□ 0.19
TNFRSF1A-209ENST00000536717 OR52E6Q96RD3 313 aa16.25■□□□□ 0.19
TNFRSF1A-209ENST00000536717 TRIM8Q9BZR9 551 aa16.25■□□□□ 0.19
TNFRSF1A-209ENST00000536717 RUBCNLQ9H714 662 aa16.25■□□□□ 0.19
TNFRSF1A-209ENST00000536717 SAR1AQ9NR31 198 aa16.25■□□□□ 0.19
TNFRSF1A-209ENST00000536717 PCDHGB4Q9UN71 923 aa16.25■□□□□ 0.19
TNFRSF1A-209ENST00000536717 ARL2BPQ9Y2Y0 163 aa16.25■□□□□ 0.19
TNFRSF1A-209ENST00000536717 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.24■□□□□ 0.19
TNFRSF1A-209ENST00000536717 PRSS51A0A1B0GVH4 220 aa16.24■□□□□ 0.19
TNFRSF1A-209ENST00000536717 C17orf51A8MQB3 221 aa16.24■□□□□ 0.19
TNFRSF1A-209ENST00000536717 RNASET2O00584 256 aaKnown RBP16.24■□□□□ 0.19
TNFRSF1A-209ENST00000536717 CFLARO15519 480 aa16.24■□□□□ 0.19
TNFRSF1A-209ENST00000536717 TOXO94900 526 aa16.24■□□□□ 0.19
TNFRSF1A-209ENST00000536717 EFNA1P20827 205 aaPredicted RBP16.24■□□□□ 0.19
TNFRSF1A-209ENST00000536717 EVI2BP34910 448 aa16.24■□□□□ 0.19
TNFRSF1A-209ENST00000536717 MAP3K8P41279 467 aa16.24■□□□□ 0.19
TNFRSF1A-209ENST00000536717 ZFP36L2P47974 494 aaKnown RBP16.24■□□□□ 0.19
TNFRSF1A-209ENST00000536717 DGKQP52824 942 aa16.24■□□□□ 0.19
TNFRSF1A-209ENST00000536717 OR5M10Q6IEU7 315 aa16.24■□□□□ 0.19
TNFRSF1A-209ENST00000536717 OR5P2Q8WZ92 322 aa16.24■□□□□ 0.19
TNFRSF1A-209ENST00000536717 GIMAP5Q96F15 307 aa16.24■□□□□ 0.19
TNFRSF1A-209ENST00000536717 OR2B2Q9GZK3 357 aa16.24■□□□□ 0.19
TNFRSF1A-209ENST00000536717 NMUR2Q9GZQ4 415 aa16.24■□□□□ 0.19
TNFRSF1A-209ENST00000536717 NEUROD4Q9HD90 331 aa16.24■□□□□ 0.19
TNFRSF1A-209ENST00000536717 Q9N2J8 555 aa16.24■□□□□ 0.19
TNFRSF1A-209ENST00000536717 NPDC1Q9NQX5 325 aaPredicted RBP16.24■□□□□ 0.19
TNFRSF1A-209ENST00000536717 FLRT3Q9NZU0 649 aa16.24■□□□□ 0.19
TNFRSF1A-209ENST00000536717 NTMQ9P121 344 aa16.24■□□□□ 0.19
TNFRSF1A-209ENST00000536717 FBXL2Q9UKC9 423 aa16.24■□□□□ 0.19
TNFRSF1A-209ENST00000536717 MYO9AB2RTY4 2548 aa16.24■□□□□ 0.19
TNFRSF1A-209ENST00000536717 AHRRA9YTQ3 701 aa16.24■□□□□ 0.19
TNFRSF1A-209ENST00000536717 NR5A2O00482 541 aa16.24■□□□□ 0.19
TNFRSF1A-209ENST00000536717 FADS1O60427 444 aa16.24■□□□□ 0.19
TNFRSF1A-209ENST00000536717 IL33O95760 270 aa16.24■□□□□ 0.19
TNFRSF1A-209ENST00000536717 ADSLP30566 484 aaPredicted RBP16.24■□□□□ 0.19
TNFRSF1A-209ENST00000536717 WNT3P56703 355 aa16.24■□□□□ 0.19
TNFRSF1A-209ENST00000536717 MRPS22P82650 360 aaKnown RBP16.24■□□□□ 0.19
TNFRSF1A-209ENST00000536717 LRRC74AQ0VAA2 488 aa16.24■□□□□ 0.19
TNFRSF1A-209ENST00000536717 RCAN2Q14206 197 aa16.24■□□□□ 0.19
TNFRSF1A-209ENST00000536717 ZNHIT3Q15649 155 aaPredicted RBP16.24■□□□□ 0.19
TNFRSF1A-209ENST00000536717 DECR1Q16698 335 aa16.24■□□□□ 0.19
TNFRSF1A-209ENST00000536717 ACSF3Q4G176 576 aaPredicted RBP16.24■□□□□ 0.19
TNFRSF1A-209ENST00000536717 BLOC1S3Q6QNY0 202 aa16.24■□□□□ 0.19
TNFRSF1A-209ENST00000536717 LIX1LQ8IVB5 337 aa16.24■□□□□ 0.19
TNFRSF1A-209ENST00000536717 ZNF295-AS1Q8N0V1 137 aa16.24■□□□□ 0.19
TNFRSF1A-209ENST00000536717 ABTB1Q969K4 478 aaPredicted RBP16.24■□□□□ 0.19
TNFRSF1A-209ENST00000536717 WDYHV1Q96HA8 205 aa16.24■□□□□ 0.19
TNFRSF1A-209ENST00000536717 SPOCK3Q9BQ16 436 aa16.24■□□□□ 0.19
TNFRSF1A-209ENST00000536717 TREX2Q9BQ50 279 aaPredicted RBP16.24■□□□□ 0.19
TNFRSF1A-209ENST00000536717 KCNJ16Q9NPI9 418 aa16.24■□□□□ 0.19
TNFRSF1A-209ENST00000536717 EQTNQ9NQ60 294 aa16.24■□□□□ 0.19
TNFRSF1A-209ENST00000536717 PDZD2O15018 2839 aa16.23■□□□□ 0.19
TNFRSF1A-209ENST00000536717 GXYLT2A0PJZ3 443 aa16.23■□□□□ 0.19
TNFRSF1A-209ENST00000536717 CCDC154A6NI56 674 aa16.23■□□□□ 0.19
TNFRSF1A-209ENST00000536717 NDUFAB1O14561 156 aa16.23■□□□□ 0.19
TNFRSF1A-209ENST00000536717 C6orf47O95873 294 aa16.23■□□□□ 0.19
TNFRSF1A-209ENST00000536717 EPPINO95925 133 aa16.23■□□□□ 0.19
TNFRSF1A-209ENST00000536717 IGFBP2P18065 325 aa16.23■□□□□ 0.19
TNFRSF1A-209ENST00000536717 GABRA3P34903 492 aa16.23■□□□□ 0.19
TNFRSF1A-209ENST00000536717 PHC1P78364 1004 aa16.23■□□□□ 0.19
TNFRSF1A-209ENST00000536717 TIGD2Q4W5G0 525 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms