RNA–Protein interactions for RNA: ENST00000536675.2

CDH20-202, Transcript of cadherin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH20, Length 2,855 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20-202ENST00000536675 PINK1Q9BXM7 581 aa13.54□□□□□ -0.24
CDH20-202ENST00000536675 ACSS1Q9NUB1 689 aaPredicted RBP13.54□□□□□ -0.24
CDH20-202ENST00000536675 H2AFY2Q9P0M6 372 aaPredicted RBP13.54□□□□□ -0.24
CDH20-202ENST00000536675 COPZ2Q9P299 210 aa13.54□□□□□ -0.24
CDH20-202ENST00000536675 PPIEQ9UNP9 301 aaKnown RBP13.54□□□□□ -0.24
CDH20-202ENST00000536675 NTNG1Q9Y2I2 539 aa13.54□□□□□ -0.24
CDH20-202ENST00000536675 COL4A3Q01955 1670 aa13.54□□□□□ -0.24
CDH20-202ENST00000536675 HEATR5BQ9P2D3 2071 aa13.54□□□□□ -0.24
CDH20-202ENST00000536675 GOLGA4Q13439 2230 aaKnown RBP13.54□□□□□ -0.24
CDH20-202ENST00000536675 LRRK1Q38SD2 2015 aa13.54□□□□□ -0.24
CDH20-202ENST00000536675 ZNF593O00488 134 aaPredicted RBP13.54□□□□□ -0.24
CDH20-202ENST00000536675 KHNYNO15037 678 aaKnown RBP13.54□□□□□ -0.24
CDH20-202ENST00000536675 HPXP02790 462 aa13.54□□□□□ -0.24
CDH20-202ENST00000536675 PEPDP12955 493 aa13.54□□□□□ -0.24
CDH20-202ENST00000536675 TRHRP34981 398 aaPredicted RBP13.54□□□□□ -0.24
CDH20-202ENST00000536675 EPHB3P54753 998 aa13.54□□□□□ -0.24
CDH20-202ENST00000536675 HSD17B12Q53GQ0 312 aa13.54□□□□□ -0.24
CDH20-202ENST00000536675 TMEM81Q6P7N7 255 aa13.54□□□□□ -0.24
CDH20-202ENST00000536675 ARL9Q6T311 187 aa13.54□□□□□ -0.24
CDH20-202ENST00000536675 NLRC3Q7RTR2 1065 aa13.54□□□□□ -0.24
CDH20-202ENST00000536675 TRAPPC5Q8IUR0 188 aa13.54□□□□□ -0.24
CDH20-202ENST00000536675 NKAIN4Q8IVV8 208 aa13.54□□□□□ -0.24
CDH20-202ENST00000536675 FTMTQ8N4E7 242 aa13.54□□□□□ -0.24
CDH20-202ENST00000536675 TMEM99Q8N816 258 aa13.54□□□□□ -0.24
CDH20-202ENST00000536675 ZBTB44Q8NCP5 570 aa13.54□□□□□ -0.24
CDH20-202ENST00000536675 SRFBP1Q8NEF9 429 aaKnown RBP13.54□□□□□ -0.24
CDH20-202ENST00000536675 SUN3Q8TAQ9 357 aa13.54□□□□□ -0.24
CDH20-202ENST00000536675 AMDHD1Q96NU7 426 aa13.54□□□□□ -0.24
CDH20-202ENST00000536675 MRPL9Q9BYD2 267 aaKnown RBP13.54□□□□□ -0.24
CDH20-202ENST00000536675 ZNF436Q9C0F3 470 aaPredicted RBP13.54□□□□□ -0.24
CDH20-202ENST00000536675 TMEM168Q9H0V1 697 aa13.54□□□□□ -0.24
CDH20-202ENST00000536675 IL20Q9NYY1 176 aa13.54□□□□□ -0.24
CDH20-202ENST00000536675 NLGN3Q9NZ94 848 aa13.54□□□□□ -0.24
CDH20-202ENST00000536675 NFKBIL1Q9UBC1 381 aaPredicted RBP13.54□□□□□ -0.24
CDH20-202ENST00000536675 WASH3PC4AMC7 463 aa13.54□□□□□ -0.24
CDH20-202ENST00000536675 M0R233 179 aa13.54□□□□□ -0.24
CDH20-202ENST00000536675 LILRB5O75023 590 aa13.54□□□□□ -0.24
CDH20-202ENST00000536675 DRD2P14416 443 aa13.54□□□□□ -0.24
CDH20-202ENST00000536675 FLT3LGP49771 235 aa13.54□□□□□ -0.24
CDH20-202ENST00000536675 KHKP50053 298 aa13.54□□□□□ -0.24
CDH20-202ENST00000536675 BAMBIQ13145 260 aa13.54□□□□□ -0.24
CDH20-202ENST00000536675 GARNL3Q5VVW2 1013 aa13.54□□□□□ -0.24
CDH20-202ENST00000536675 BTN2A1Q7KYR7 527 aa13.54□□□□□ -0.24
CDH20-202ENST00000536675 ACBD7Q8N6N7 88 aa13.54□□□□□ -0.24
CDH20-202ENST00000536675 OR2T4Q8NH00 348 aa13.54□□□□□ -0.24
CDH20-202ENST00000536675 OR5W2Q8NH69 310 aa13.54□□□□□ -0.24
CDH20-202ENST00000536675 DIO2Q92813 273 aa13.54□□□□□ -0.24
CDH20-202ENST00000536675 PMEPA1Q969W9 287 aa13.54□□□□□ -0.24
CDH20-202ENST00000536675 KLHL15Q96M94 604 aa13.54□□□□□ -0.24
CDH20-202ENST00000536675 COQ10AQ96MF6 247 aa13.54□□□□□ -0.24
CDH20-202ENST00000536675 ZFP3Q96NJ6 502 aa13.54□□□□□ -0.24
CDH20-202ENST00000536675 CAMK1GQ96NX5 476 aa13.54□□□□□ -0.24
CDH20-202ENST00000536675 TEX12Q9BXU0 123 aa13.54□□□□□ -0.24
CDH20-202ENST00000536675 RHBGQ9H310 441 aa13.54□□□□□ -0.24
CDH20-202ENST00000536675 METTL17Q9H7H0 456 aaPredicted RBP13.54□□□□□ -0.24
CDH20-202ENST00000536675 MED17Q9NVC6 651 aa13.54□□□□□ -0.24
CDH20-202ENST00000536675 MRPS7Q9Y2R9 242 aaKnown RBP13.54□□□□□ -0.24
CDH20-202ENST00000536675 NPTNQ9Y639 398 aa13.54□□□□□ -0.24
CDH20-202ENST00000536675 KCNE3Q9Y6H6 103 aa13.54□□□□□ -0.24
CDH20-202ENST00000536675 FEZF1A0PJY2 475 aa13.53□□□□□ -0.24
CDH20-202ENST00000536675 E9PI62 339 aa13.53□□□□□ -0.24
CDH20-202ENST00000536675 SLC9A3R1O14745 358 aaPredicted RBP13.53□□□□□ -0.24
CDH20-202ENST00000536675 ACSM4P0C7M7 580 aa13.53□□□□□ -0.24
CDH20-202ENST00000536675 AHRP35869 848 aa13.53□□□□□ -0.24
CDH20-202ENST00000536675 STAT5AP42229 794 aa13.53□□□□□ -0.24
CDH20-202ENST00000536675 CDC73Q6P1J9 531 aa13.53□□□□□ -0.24
CDH20-202ENST00000536675 KANSL1Q7Z3B3 1105 aa13.53□□□□□ -0.24
CDH20-202ENST00000536675 CEACAM19Q7Z692 300 aa13.53□□□□□ -0.24
CDH20-202ENST00000536675 FGD2Q7Z6J4 655 aa13.53□□□□□ -0.24
CDH20-202ENST00000536675 ZNF527Q8NB42 609 aa13.53□□□□□ -0.24
CDH20-202ENST00000536675 ZG16BQ96DA0 208 aa13.53□□□□□ -0.24
CDH20-202ENST00000536675 OR2AG1Q9H205 316 aa13.53□□□□□ -0.24
CDH20-202ENST00000536675 ENTPD4Q9Y227 616 aa13.53□□□□□ -0.24
CDH20-202ENST00000536675 A0A0G2JN53 185 aa13.53□□□□□ -0.24
CDH20-202ENST00000536675 CXorf51AA0A1B0GTR3 108 aa13.53□□□□□ -0.24
CDH20-202ENST00000536675 NRG2O14511 850 aaPredicted RBP13.53□□□□□ -0.24
CDH20-202ENST00000536675 PIP5K1CO60331 668 aa13.53□□□□□ -0.24
CDH20-202ENST00000536675 UGT2B7P16662 529 aa13.53□□□□□ -0.24
CDH20-202ENST00000536675 DRD5P21918 477 aa13.53□□□□□ -0.24
CDH20-202ENST00000536675 F8A1P23610 371 aa13.53□□□□□ -0.24
CDH20-202ENST00000536675 FPR3P25089 353 aa13.53□□□□□ -0.24
CDH20-202ENST00000536675 LCN1P31025 176 aa13.53□□□□□ -0.24
CDH20-202ENST00000536675 RECQLP46063 649 aaPredicted RBP13.53□□□□□ -0.24
CDH20-202ENST00000536675 GBX2P52951 348 aaPredicted RBP13.53□□□□□ -0.24
CDH20-202ENST00000536675 RAG2P55895 527 aa13.53□□□□□ -0.24
CDH20-202ENST00000536675 LASP1Q14847 261 aaKnown RBP13.53□□□□□ -0.24
CDH20-202ENST00000536675 ZSWIM7Q19AV6 140 aa13.53□□□□□ -0.24
CDH20-202ENST00000536675 MTFR2Q6P444 385 aa13.53□□□□□ -0.24
CDH20-202ENST00000536675 LCTLQ6UWM7 567 aa13.53□□□□□ -0.24
CDH20-202ENST00000536675 CXXC5Q7LFL8 322 aaKnown RBP13.53□□□□□ -0.24
CDH20-202ENST00000536675 VRK2Q86Y07 508 aa13.53□□□□□ -0.24
CDH20-202ENST00000536675 OR51Q1Q8NH59 317 aa13.53□□□□□ -0.24
CDH20-202ENST00000536675 AHCYL2Q96HN2 611 aaKnown RBP13.53□□□□□ -0.24
CDH20-202ENST00000536675 LINC00052Q96N35 136 aa13.53□□□□□ -0.24
CDH20-202ENST00000536675 REG4Q9BYZ8 158 aa13.53□□□□□ -0.24
CDH20-202ENST00000536675 SPRTNQ9H040 489 aaPredicted RBP13.53□□□□□ -0.24
CDH20-202ENST00000536675 MED20Q9H944 212 aa13.53□□□□□ -0.24
CDH20-202ENST00000536675 MRPL17Q9NRX2 175 aaKnown RBP13.53□□□□□ -0.24
CDH20-202ENST00000536675 RWDD3Q9Y3V2 267 aa13.53□□□□□ -0.24
CDH20-202ENST00000536675 A0A0G2JPF8 293 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms