RNA–Protein interactions for RNA: ENST00000536295.1

RTN3P1-201, Transcript of reticulon 3 pseudogene 1, humanhuman

BASIC

Gene RTN3P1, Length 711 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3P1-201ENST00000536295 MFSD12Q6NUT3 480 aa12.91□□□□□ -0.34
RTN3P1-201ENST00000536295 WDR93Q6P2C0 686 aa12.91□□□□□ -0.34
RTN3P1-201ENST00000536295 MEIOBQ8N635 442 aa12.91□□□□□ -0.34
RTN3P1-201ENST00000536295 GATSQ8NAP1 163 aa12.91□□□□□ -0.34
RTN3P1-201ENST00000536295 FNDC5Q8NAU1 212 aa12.91□□□□□ -0.34
RTN3P1-201ENST00000536295 SLC16A11Q8NCK7 471 aa12.91□□□□□ -0.34
RTN3P1-201ENST00000536295 PPP1R14CQ8TAE6 165 aa12.91□□□□□ -0.34
RTN3P1-201ENST00000536295 NUDT8Q8WV74 236 aa12.91□□□□□ -0.34
RTN3P1-201ENST00000536295 SMPDL3BQ92485 455 aa12.91□□□□□ -0.34
RTN3P1-201ENST00000536295 ZBTB9Q96C00 473 aa12.91□□□□□ -0.34
RTN3P1-201ENST00000536295 MTERF3Q96E29 417 aa12.91□□□□□ -0.34
RTN3P1-201ENST00000536295 GIMAP5Q96F15 307 aa12.91□□□□□ -0.34
RTN3P1-201ENST00000536295 CHMP6Q96FZ7 201 aa12.91□□□□□ -0.34
RTN3P1-201ENST00000536295 PKNOX2Q96KN3 472 aa12.91□□□□□ -0.34
RTN3P1-201ENST00000536295 ZFP3Q96NJ6 502 aa12.91□□□□□ -0.34
RTN3P1-201ENST00000536295 UCN2Q96RP3 112 aa12.91□□□□□ -0.34
RTN3P1-201ENST00000536295 ACBD3Q9H3P7 528 aa12.91□□□□□ -0.34
RTN3P1-201ENST00000536295 LIME1Q9H400 295 aa12.91□□□□□ -0.34
RTN3P1-201ENST00000536295 ZCCHC3Q9NUD5 404 aaKnown RBP12.91□□□□□ -0.34
RTN3P1-201ENST00000536295 SNX8Q9Y5X2 465 aa12.91□□□□□ -0.34
RTN3P1-201ENST00000536295 A0A1W2PRB8 838 aa12.9□□□□□ -0.34
RTN3P1-201ENST00000536295 OR2M5A3KFT3 312 aa12.9□□□□□ -0.34
RTN3P1-201ENST00000536295 WDR91A4D1P6 747 aa12.9□□□□□ -0.34
RTN3P1-201ENST00000536295 SLC22A20A6NK97 555 aa12.9□□□□□ -0.34
RTN3P1-201ENST00000536295 HCRTR2O43614 444 aa12.9□□□□□ -0.34
RTN3P1-201ENST00000536295 TYROBPO43914 113 aa12.9□□□□□ -0.34
RTN3P1-201ENST00000536295 KCNK2O95069 426 aa12.9□□□□□ -0.34
RTN3P1-201ENST00000536295 ALOX5P09917 674 aa12.9□□□□□ -0.34
RTN3P1-201ENST00000536295 LAMP1P11279 417 aa12.9□□□□□ -0.34
RTN3P1-201ENST00000536295 DDX5P17844 614 aaKnown RBP12.9□□□□□ -0.34
RTN3P1-201ENST00000536295 CPOXP36551 454 aa12.9□□□□□ -0.34
RTN3P1-201ENST00000536295 SERPINB5P36952 375 aa12.9□□□□□ -0.34
RTN3P1-201ENST00000536295 MAP3K8P41279 467 aa12.9□□□□□ -0.34
RTN3P1-201ENST00000536295 SUCLG1P53597 346 aaKnown RBP12.9□□□□□ -0.34
RTN3P1-201ENST00000536295 CLDN15P56746 228 aa12.9□□□□□ -0.34
RTN3P1-201ENST00000536295 PRR5P85299 388 aa12.9□□□□□ -0.34
RTN3P1-201ENST00000536295 C17orf67Q0P5P2 114 aa12.9□□□□□ -0.34
RTN3P1-201ENST00000536295 PTGR1Q14914 329 aa12.9□□□□□ -0.34
RTN3P1-201ENST00000536295 BCL2A1Q16548 175 aa12.9□□□□□ -0.34
RTN3P1-201ENST00000536295 DUSP5Q16690 384 aa12.9□□□□□ -0.34
RTN3P1-201ENST00000536295 KRT71Q3SY84 523 aa12.9□□□□□ -0.34
RTN3P1-201ENST00000536295 CCNJQ5T5M9 372 aa12.9□□□□□ -0.34
RTN3P1-201ENST00000536295 IL23RQ5VWK5 629 aa12.9□□□□□ -0.34
RTN3P1-201ENST00000536295 LRIG3Q6UXM1 1119 aa12.9□□□□□ -0.34
RTN3P1-201ENST00000536295 ZAR1Q86SH2 424 aa12.9□□□□□ -0.34
RTN3P1-201ENST00000536295 NUDCD3Q8IVD9 361 aa12.9□□□□□ -0.34
RTN3P1-201ENST00000536295 HOMEZQ8IX15 550 aa12.9□□□□□ -0.34
RTN3P1-201ENST00000536295 COX18Q8N8Q8 333 aa12.9□□□□□ -0.34
RTN3P1-201ENST00000536295 CNEP1R1Q8N9A8 125 aa12.9□□□□□ -0.34
RTN3P1-201ENST00000536295 OR4C3Q8NH37 302 aa12.9□□□□□ -0.34
RTN3P1-201ENST00000536295 GOT1L1Q8NHS2 421 aaPredicted RBP12.9□□□□□ -0.34
RTN3P1-201ENST00000536295 FIG4Q92562 907 aa12.9□□□□□ -0.34
RTN3P1-201ENST00000536295 HOXB13Q92826 284 aaPredicted RBP12.9□□□□□ -0.34
RTN3P1-201ENST00000536295 TUBGCP3Q96CW5 907 aa12.9□□□□□ -0.34
RTN3P1-201ENST00000536295 FAM120BQ96EK7 910 aaKnown RBP12.9□□□□□ -0.34
RTN3P1-201ENST00000536295 PIGQQ9BRB3 760 aa12.9□□□□□ -0.34
RTN3P1-201ENST00000536295 PINK1Q9BXM7 581 aa12.9□□□□□ -0.34
RTN3P1-201ENST00000536295 FBXO34Q9NWN3 711 aa12.9□□□□□ -0.34
RTN3P1-201ENST00000536295 GALNT8Q9NY28 637 aa12.9□□□□□ -0.34
RTN3P1-201ENST00000536295 NTMQ9P121 344 aa12.9□□□□□ -0.34
RTN3P1-201ENST00000536295 ATP6V1HQ9UI12 483 aa12.9□□□□□ -0.34
RTN3P1-201ENST00000536295 VDAC3Q9Y277 283 aa12.9□□□□□ -0.34
RTN3P1-201ENST00000536295 TEP1Q99973 2627 aaKnown RBP12.9□□□□□ -0.35
RTN3P1-201ENST00000536295 A0A1W2PNV4 684 aa12.89□□□□□ -0.35
RTN3P1-201ENST00000536295 NDUFB5O43674 189 aa12.89□□□□□ -0.35
RTN3P1-201ENST00000536295 LYPLA1O75608 230 aaPredicted RBP12.89□□□□□ -0.35
RTN3P1-201ENST00000536295 SMNDC1O75940 238 aaKnown RBP eCLIP12.89□□□□□ -0.35
RTN3P1-201ENST00000536295 OXSR1O95747 527 aaPredicted RBP12.89□□□□□ -0.35
RTN3P1-201ENST00000536295 HSPA4LO95757 839 aa12.89□□□□□ -0.35
RTN3P1-201ENST00000536295 EPXP11678 715 aa12.89□□□□□ -0.35
RTN3P1-201ENST00000536295 RPL3P39023 403 aaKnown RBP12.89□□□□□ -0.35
RTN3P1-201ENST00000536295 ETV4P43268 484 aa12.89□□□□□ -0.35
RTN3P1-201ENST00000536295 PRIM2P49643 509 aa12.89□□□□□ -0.35
RTN3P1-201ENST00000536295 IST1P53990 364 aa12.89□□□□□ -0.35
RTN3P1-201ENST00000536295 DIO3P55073 304 aa12.89□□□□□ -0.35
RTN3P1-201ENST00000536295 CLDN20P56880 219 aa12.89□□□□□ -0.35
RTN3P1-201ENST00000536295 EEFSECP57772 596 aaKnown RBP12.89□□□□□ -0.35
RTN3P1-201ENST00000536295 SIRPAP78324 504 aa12.89□□□□□ -0.35
RTN3P1-201ENST00000536295 SORDQ00796 357 aa12.89□□□□□ -0.35
RTN3P1-201ENST00000536295 LASP1Q14847 261 aaKnown RBP12.89□□□□□ -0.35
RTN3P1-201ENST00000536295 C6orf136Q5SQH8 315 aa12.89□□□□□ -0.35
RTN3P1-201ENST00000536295 CPTPQ5TA50 214 aa12.89□□□□□ -0.35
RTN3P1-201ENST00000536295 PPP4R4Q6NUP7 873 aa12.89□□□□□ -0.35
RTN3P1-201ENST00000536295 CDC20BQ86Y33 519 aa12.89□□□□□ -0.35
RTN3P1-201ENST00000536295 KRTCAP2Q8N6L1 136 aa12.89□□□□□ -0.35
RTN3P1-201ENST00000536295 ZNF845Q96IR2 970 aaPredicted RBP12.89□□□□□ -0.35
RTN3P1-201ENST00000536295 PPP1R36Q96LQ0 422 aa12.89□□□□□ -0.35
RTN3P1-201ENST00000536295 PIGMQ9H3S5 423 aa12.89□□□□□ -0.35
RTN3P1-201ENST00000536295 SIRT3Q9NTG7 399 aaPredicted RBP12.89□□□□□ -0.35
RTN3P1-201ENST00000536295 CCM2LQ9NUG4 571 aaPredicted RBP12.89□□□□□ -0.35
RTN3P1-201ENST00000536295 PACSIN3Q9UKS6 424 aa12.89□□□□□ -0.35
RTN3P1-201ENST00000536295 CELSR1Q9NYQ6 3014 aa12.88□□□□□ -0.35
RTN3P1-201ENST00000536295 IGLV3-32A0A0A0MS00 114 aa12.88□□□□□ -0.35
RTN3P1-201ENST00000536295 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.88□□□□□ -0.35
RTN3P1-201ENST00000536295 FAM221AA4D161 298 aa12.88□□□□□ -0.35
RTN3P1-201ENST00000536295 ALG1L2C9J202 215 aa12.88□□□□□ -0.35
RTN3P1-201ENST00000536295 LINC01387J3KSC0 135 aa12.88□□□□□ -0.35
RTN3P1-201ENST00000536295 RGS16O15492 202 aaPredicted RBP12.88□□□□□ -0.35
RTN3P1-201ENST00000536295 CTIFO43310 598 aaKnown RBP12.88□□□□□ -0.35
RTN3P1-201ENST00000536295 ITM2AO43736 263 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms