RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-223ENST00000534442 EPHA2P29317 976 aa3.93□□□□□ -1.78
ECHDC1-223ENST00000534442 ATP5C1P36542 298 aaKnown RBP3.93□□□□□ -1.78
ECHDC1-223ENST00000534442 FRKP42685 505 aaPredicted RBP3.93□□□□□ -1.78
ECHDC1-223ENST00000534442 RPL21P46778 160 aaKnown RBP3.93□□□□□ -1.78
ECHDC1-223ENST00000534442 THBS3P49746 956 aa3.93□□□□□ -1.78
ECHDC1-223ENST00000534442 STX1BP61266 288 aa3.93□□□□□ -1.78
ECHDC1-223ENST00000534442 PITX1P78337 314 aaPredicted RBP3.93□□□□□ -1.78
ECHDC1-223ENST00000534442 UBXN1Q04323 297 aa3.93□□□□□ -1.78
ECHDC1-223ENST00000534442 RASGEF1BQ0VAM2 473 aa3.93□□□□□ -1.78
ECHDC1-223ENST00000534442 AP1B1Q10567 949 aa3.93□□□□□ -1.78
ECHDC1-223ENST00000534442 ILF3Q12906 894 aaKnown RBP eCLIP3.93□□□□□ -1.78
ECHDC1-223ENST00000534442 KBTBD12Q3ZCT8 623 aa3.93□□□□□ -1.78
ECHDC1-223ENST00000534442 FAM166AQ6J272 317 aa3.93□□□□□ -1.78
ECHDC1-223ENST00000534442 TMEM270Q6UE05 265 aa3.93□□□□□ -1.78
ECHDC1-223ENST00000534442 CWC27Q6UX04 472 aaKnown RBP3.93□□□□□ -1.78
ECHDC1-223ENST00000534442 RPRMLQ8N4K4 120 aa3.93□□□□□ -1.78
ECHDC1-223ENST00000534442 MAPKAPK5-AS1Q8N8E1 139 aa3.93□□□□□ -1.78
ECHDC1-223ENST00000534442 SPC24Q8NBT2 197 aa3.93□□□□□ -1.78
ECHDC1-223ENST00000534442 OR2T12Q8NG77 320 aa3.93□□□□□ -1.78
ECHDC1-223ENST00000534442 KIFAP3Q92845 792 aa3.93□□□□□ -1.78
ECHDC1-223ENST00000534442 ZBTB9Q96C00 473 aa3.93□□□□□ -1.78
ECHDC1-223ENST00000534442 SLC47A1Q96FL8 570 aa3.93□□□□□ -1.78
ECHDC1-223ENST00000534442 NSMCE3Q96MG7 304 aa3.93□□□□□ -1.78
ECHDC1-223ENST00000534442 ZNF560Q96MR9 790 aa3.93□□□□□ -1.78
ECHDC1-223ENST00000534442 C1QTNF4Q9BXJ3 329 aa3.93□□□□□ -1.78
ECHDC1-223ENST00000534442 LAT2Q9GZY6 243 aa3.93□□□□□ -1.78
ECHDC1-223ENST00000534442 SNX25Q9H3E2 840 aa3.93□□□□□ -1.78
ECHDC1-223ENST00000534442 RETREG1Q9H6L5 497 aa3.93□□□□□ -1.78
ECHDC1-223ENST00000534442 DCTPP1Q9H773 170 aa3.93□□□□□ -1.78
ECHDC1-223ENST00000534442 EVA1AQ9H8M9 152 aa3.93□□□□□ -1.78
ECHDC1-223ENST00000534442 SDR39U1Q9NRG7 319 aaPredicted RBP3.93□□□□□ -1.78
ECHDC1-223ENST00000534442 IARS2Q9NSE4 1012 aaKnown RBP3.93□□□□□ -1.78
ECHDC1-223ENST00000534442 SPHK1Q9NYA1 384 aa3.93□□□□□ -1.78
ECHDC1-223ENST00000534442 ZDHHC2Q9UIJ5 367 aa3.93□□□□□ -1.78
ECHDC1-223ENST00000534442 SLC7A7Q9UM01 511 aa3.93□□□□□ -1.78
ECHDC1-223ENST00000534442 DNAH3Q8TD57 4116 aa3.93□□□□□ -1.78
ECHDC1-223ENST00000534442 PRR14LQ5THK1 2151 aa3.93□□□□□ -1.78
ECHDC1-223ENST00000534442 MALRD1Q5VYJ5 2156 aa3.92□□□□□ -1.78
ECHDC1-223ENST00000534442 A0A087WWV3 80 aa3.92□□□□□ -1.78
ECHDC1-223ENST00000534442 TRAV17A0A0B4J275 112 aa3.92□□□□□ -1.78
ECHDC1-223ENST00000534442 A0A1W2PRV1 198 aa3.92□□□□□ -1.78
ECHDC1-223ENST00000534442 SMIM30A4D0T7 59 aa3.92□□□□□ -1.78
ECHDC1-223ENST00000534442 SDR42E2A6NKP2 422 aa3.92□□□□□ -1.78
ECHDC1-223ENST00000534442 CCDC169A6NNP5 214 aa3.92□□□□□ -1.78
ECHDC1-223ENST00000534442 XPNPEP2O43895 674 aa3.92□□□□□ -1.78
ECHDC1-223ENST00000534442 SNRNP70P08621 437 aaKnown RBP3.92□□□□□ -1.78
ECHDC1-223ENST00000534442 FGF5P12034 268 aa3.92□□□□□ -1.78
ECHDC1-223ENST00000534442 PAX1P15863 534 aa3.92□□□□□ -1.78
ECHDC1-223ENST00000534442 CA4P22748 312 aa3.92□□□□□ -1.78
ECHDC1-223ENST00000534442 CD70P32970 193 aa3.92□□□□□ -1.78
ECHDC1-223ENST00000534442 KHKP50053 298 aa3.92□□□□□ -1.78
ECHDC1-223ENST00000534442 SNU13P55769 128 aaKnown RBP3.92□□□□□ -1.78
ECHDC1-223ENST00000534442 ARG2P78540 354 aa3.92□□□□□ -1.78
ECHDC1-223ENST00000534442 VLDLRP98155 873 aa3.92□□□□□ -1.78
ECHDC1-223ENST00000534442 LGALS3BPQ08380 585 aa3.92□□□□□ -1.78
ECHDC1-223ENST00000534442 ILF2Q12905 390 aaKnown RBP3.92□□□□□ -1.78
ECHDC1-223ENST00000534442 ACKR1Q16570 336 aa3.92□□□□□ -1.78
ECHDC1-223ENST00000534442 KPRPQ5T749 579 aaPredicted RBP3.92□□□□□ -1.78
ECHDC1-223ENST00000534442 FAM46CQ5VWP2 391 aa3.92□□□□□ -1.78
ECHDC1-223ENST00000534442 NADSYN1Q6IA69 706 aa3.92□□□□□ -1.78
ECHDC1-223ENST00000534442 CASC4Q6P4E1 433 aa3.92□□□□□ -1.78
ECHDC1-223ENST00000534442 RAPH1Q70E73 1250 aa3.92□□□□□ -1.78
ECHDC1-223ENST00000534442 KCTD9Q7L273 389 aa3.92□□□□□ -1.78
ECHDC1-223ENST00000534442 PIGWQ7Z7B1 504 aa3.92□□□□□ -1.78
ECHDC1-223ENST00000534442 ZNF554Q86TJ5 538 aa3.92□□□□□ -1.78
ECHDC1-223ENST00000534442 CREBRFQ8IUR6 639 aa3.92□□□□□ -1.78
ECHDC1-223ENST00000534442 LGI2Q8N0V4 545 aa3.92□□□□□ -1.78
ECHDC1-223ENST00000534442 DCAF4L2Q8NA75 395 aa3.92□□□□□ -1.78
ECHDC1-223ENST00000534442 CCDC148Q8NFR7 591 aa3.92□□□□□ -1.78
ECHDC1-223ENST00000534442 OR10Q1Q8NGQ4 319 aa3.92□□□□□ -1.78
ECHDC1-223ENST00000534442 LMO3Q8TAP4 145 aa3.92□□□□□ -1.78
ECHDC1-223ENST00000534442 MUC7Q8TAX7 377 aa3.92□□□□□ -1.78
ECHDC1-223ENST00000534442 SECTM1Q8WVN6 248 aa3.92□□□□□ -1.78
ECHDC1-223ENST00000534442 SCRN2Q96FV2 425 aa3.92□□□□□ -1.78
ECHDC1-223ENST00000534442 DUX5Q96PT3 197 aa3.92□□□□□ -1.78
ECHDC1-223ENST00000534442 CCT8L2Q96SF2 557 aa3.92□□□□□ -1.78
ECHDC1-223ENST00000534442 SYT15Q9BQS2 421 aa3.92□□□□□ -1.78
ECHDC1-223ENST00000534442 RBM4Q9BWF3 364 aaKnown RBP3.92□□□□□ -1.78
ECHDC1-223ENST00000534442 PRRG4Q9BZD6 226 aa3.92□□□□□ -1.78
ECHDC1-223ENST00000534442 CHMP4BQ9H444 224 aaKnown RBP3.92□□□□□ -1.78
ECHDC1-223ENST00000534442 RAB9BQ9NP90 201 aa3.92□□□□□ -1.78
ECHDC1-223ENST00000534442 MID1IP1Q9NPA3 183 aa3.92□□□□□ -1.78
ECHDC1-223ENST00000534442 SLCO1C1Q9NYB5 712 aa3.92□□□□□ -1.78
ECHDC1-223ENST00000534442 IKZF3Q9UKT9 509 aa3.92□□□□□ -1.78
ECHDC1-223ENST00000534442 CDH9Q9ULB4 789 aa3.92□□□□□ -1.78
ECHDC1-223ENST00000534442 DDX19BQ9UMR2 479 aa3.92□□□□□ -1.78
ECHDC1-223ENST00000534442 HBS1LQ9Y450 684 aaKnown RBP3.92□□□□□ -1.78
ECHDC1-223ENST00000534442 DSCAMO60469 2012 aa3.92□□□□□ -1.78
ECHDC1-223ENST00000534442 PLSCR5A0PG75 271 aa3.91□□□□□ -1.78
ECHDC1-223ENST00000534442 FAM92AA1XBS5 289 aa3.91□□□□□ -1.78
ECHDC1-223ENST00000534442 TUBAL3A6NHL2 446 aa3.91□□□□□ -1.78
ECHDC1-223ENST00000534442 ARPC2O15144 300 aa3.91□□□□□ -1.78
ECHDC1-223ENST00000534442 CTDSPLO15194 276 aa3.91□□□□□ -1.78
ECHDC1-223ENST00000534442 HCRTO43612 131 aa3.91□□□□□ -1.78
ECHDC1-223ENST00000534442 SNX3O60493 162 aa3.91□□□□□ -1.78
ECHDC1-223ENST00000534442 ALOX12BO75342 701 aa3.91□□□□□ -1.78
ECHDC1-223ENST00000534442 SLC22A3O75751 556 aa3.91□□□□□ -1.78
ECHDC1-223ENST00000534442 UROSP10746 265 aa3.91□□□□□ -1.78
ECHDC1-223ENST00000534442 CASP3P42574 277 aa3.91□□□□□ -1.78
ECHDC1-223ENST00000534442 FMO5P49326 533 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms