RNA–Protein interactions for RNA: ENST00000534307.1

SF3B2-215, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-215ENST00000534307 C3orf14Q9HBI5 128 aa12.72□□□□□ -0.37
SF3B2-215ENST00000534307 SDHAF3Q9NRP4 125 aa12.72□□□□□ -0.37
SF3B2-215ENST00000534307 MED11Q9P086 117 aa12.72□□□□□ -0.37
SF3B2-215ENST00000534307 RPH3AQ9Y2J0 694 aaPredicted RBP12.72□□□□□ -0.37
SF3B2-215ENST00000534307 MED12LQ86YW9 2145 aa12.71□□□□□ -0.37
SF3B2-215ENST00000534307 CLCA1A8K7I4 914 aa12.71□□□□□ -0.37
SF3B2-215ENST00000534307 TM9SF1O15321 606 aa12.71□□□□□ -0.37
SF3B2-215ENST00000534307 BIRC5O15392 142 aa12.71□□□□□ -0.37
SF3B2-215ENST00000534307 EMC8O43402 210 aa12.71□□□□□ -0.37
SF3B2-215ENST00000534307 KCNK2O95069 426 aa12.71□□□□□ -0.37
SF3B2-215ENST00000534307 RCBTB2O95199 551 aa12.71□□□□□ -0.37
SF3B2-215ENST00000534307 KCNH1O95259 989 aa12.71□□□□□ -0.37
SF3B2-215ENST00000534307 RPL3P39023 403 aaKnown RBP12.71□□□□□ -0.37
SF3B2-215ENST00000534307 PRKAG1P54619 331 aa12.71□□□□□ -0.37
SF3B2-215ENST00000534307 CLDN15P56746 228 aa12.71□□□□□ -0.37
SF3B2-215ENST00000534307 C21orf58P58505 322 aa12.71□□□□□ -0.37
SF3B2-215ENST00000534307 SRYQ05066 204 aa12.71□□□□□ -0.37
SF3B2-215ENST00000534307 FOXF2Q12947 444 aa12.71□□□□□ -0.37
SF3B2-215ENST00000534307 STX5Q13190 355 aa12.71□□□□□ -0.37
SF3B2-215ENST00000534307 DUSP5Q16690 384 aa12.71□□□□□ -0.37
SF3B2-215ENST00000534307 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.71□□□□□ -0.37
SF3B2-215ENST00000534307 TMEM44Q2T9K0 475 aa12.71□□□□□ -0.37
SF3B2-215ENST00000534307 GRAMD1BQ3KR37 738 aa12.71□□□□□ -0.37
SF3B2-215ENST00000534307 IL23RQ5VWK5 629 aa12.71□□□□□ -0.37
SF3B2-215ENST00000534307 ZCCHC12Q6PEW1 402 aa12.71□□□□□ -0.37
SF3B2-215ENST00000534307 PLXDC2Q6UX71 529 aa12.71□□□□□ -0.37
SF3B2-215ENST00000534307 FNDC5Q8NAU1 212 aa12.71□□□□□ -0.37
SF3B2-215ENST00000534307 OR4C3Q8NH37 302 aa12.71□□□□□ -0.37
SF3B2-215ENST00000534307 DUSP19Q8WTR2 217 aa12.71□□□□□ -0.37
SF3B2-215ENST00000534307 RNASE6Q93091 150 aaKnown RBP12.71□□□□□ -0.37
SF3B2-215ENST00000534307 WNT2BQ93097 391 aa12.71□□□□□ -0.37
SF3B2-215ENST00000534307 COQ8BQ96D53 544 aa12.71□□□□□ -0.37
SF3B2-215ENST00000534307 C16orf58Q96GQ5 468 aa12.71□□□□□ -0.37
SF3B2-215ENST00000534307 ZFP3Q96NJ6 502 aa12.71□□□□□ -0.37
SF3B2-215ENST00000534307 ZIM3Q96PE6 472 aa12.71□□□□□ -0.37
SF3B2-215ENST00000534307 ZNF559Q9BR84 538 aa12.71□□□□□ -0.37
SF3B2-215ENST00000534307 C20orf27Q9GZN8 174 aa12.71□□□□□ -0.37
SF3B2-215ENST00000534307 ASIC5Q9NY37 505 aa12.71□□□□□ -0.37
SF3B2-215ENST00000534307 HAO1Q9UJM8 370 aa12.71□□□□□ -0.37
SF3B2-215ENST00000534307 A0A1W2PRB8 838 aa12.7□□□□□ -0.38
SF3B2-215ENST00000534307 FAM221AA4D161 298 aa12.7□□□□□ -0.38
SF3B2-215ENST00000534307 ALG1L2C9J202 215 aa12.7□□□□□ -0.38
SF3B2-215ENST00000534307 OXSR1O95747 527 aaPredicted RBP12.7□□□□□ -0.38
SF3B2-215ENST00000534307 ANGPTL1O95841 491 aa12.7□□□□□ -0.38
SF3B2-215ENST00000534307 TMIGD3P0DMS9 266 aaPredicted RBP12.7□□□□□ -0.38
SF3B2-215ENST00000534307 G6PDP11413 515 aa12.7□□□□□ -0.38
SF3B2-215ENST00000534307 DDX5P17844 614 aaKnown RBP12.7□□□□□ -0.38
SF3B2-215ENST00000534307 PRPS1L1P21108 318 aa12.7□□□□□ -0.38
SF3B2-215ENST00000534307 TBXA2RP21731 343 aa12.7□□□□□ -0.38
SF3B2-215ENST00000534307 TCEA1P23193 301 aaKnown RBP12.7□□□□□ -0.38
SF3B2-215ENST00000534307 OPRM1P35372 400 aa12.7□□□□□ -0.38
SF3B2-215ENST00000534307 PEX19P40855 299 aa12.7□□□□□ -0.38
SF3B2-215ENST00000534307 RFX3P48380 749 aa12.7□□□□□ -0.38
SF3B2-215ENST00000534307 AGFG1P52594 562 aaKnown RBP12.7□□□□□ -0.38
SF3B2-215ENST00000534307 DIO3P55073 304 aa12.7□□□□□ -0.38
SF3B2-215ENST00000534307 ABCE1P61221 599 aaKnown RBP12.7□□□□□ -0.38
SF3B2-215ENST00000534307 EMX2Q04743 252 aa12.7□□□□□ -0.38
SF3B2-215ENST00000534307 SNTB1Q13884 538 aaKnown RBP12.7□□□□□ -0.38
SF3B2-215ENST00000534307 CHI3L2Q15782 390 aa12.7□□□□□ -0.38
SF3B2-215ENST00000534307 CPTPQ5TA50 214 aa12.7□□□□□ -0.38
SF3B2-215ENST00000534307 CAMKMTQ7Z624 323 aa12.7□□□□□ -0.38
SF3B2-215ENST00000534307 KRTCAP2Q8N6L1 136 aa12.7□□□□□ -0.38
SF3B2-215ENST00000534307 ZNF781Q8N8C0 355 aa12.7□□□□□ -0.38
SF3B2-215ENST00000534307 FBXO30Q8TB52 745 aa12.7□□□□□ -0.38
SF3B2-215ENST00000534307 OR5P2Q8WZ92 322 aa12.7□□□□□ -0.38
SF3B2-215ENST00000534307 SLC9A6Q92581 669 aa12.7□□□□□ -0.38
SF3B2-215ENST00000534307 TUBGCP3Q96CW5 907 aa12.7□□□□□ -0.38
SF3B2-215ENST00000534307 SORT1Q99523 831 aa12.7□□□□□ -0.38
SF3B2-215ENST00000534307 TM9SF2Q99805 663 aa12.7□□□□□ -0.38
SF3B2-215ENST00000534307 TBL1XR1Q9BZK7 514 aa12.7□□□□□ -0.38
SF3B2-215ENST00000534307 ZCCHC3Q9NUD5 404 aaKnown RBP12.7□□□□□ -0.38
SF3B2-215ENST00000534307 FBXO34Q9NWN3 711 aa12.7□□□□□ -0.38
SF3B2-215ENST00000534307 GIN1Q9NXP7 522 aa12.7□□□□□ -0.38
SF3B2-215ENST00000534307 FOXD3Q9UJU5 478 aaPredicted RBP12.7□□□□□ -0.38
SF3B2-215ENST00000534307 ACTL7BQ9Y614 415 aa12.7□□□□□ -0.38
SF3B2-215ENST00000534307 OR2M5A3KFT3 312 aa12.69□□□□□ -0.38
SF3B2-215ENST00000534307 WDR91A4D1P6 747 aa12.69□□□□□ -0.38
SF3B2-215ENST00000534307 CTAG2O75638 210 aa12.69□□□□□ -0.38
SF3B2-215ENST00000534307 HSPA4LO95757 839 aa12.69□□□□□ -0.38
SF3B2-215ENST00000534307 TGM6O95932 706 aa12.69□□□□□ -0.38
SF3B2-215ENST00000534307 HMGN2P05204 90 aaKnown RBP12.69□□□□□ -0.38
SF3B2-215ENST00000534307 TUBBP07437 444 aa12.69□□□□□ -0.38
SF3B2-215ENST00000534307 HK1P19367 917 aa12.69□□□□□ -0.38
SF3B2-215ENST00000534307 LCN1P31025 176 aa12.69□□□□□ -0.38
SF3B2-215ENST00000534307 UQCRC1P31930 480 aa12.69□□□□□ -0.38
SF3B2-215ENST00000534307 KIR2DL3P43628 341 aa12.69□□□□□ -0.38
SF3B2-215ENST00000534307 CLK3P49761 638 aaKnown RBP12.69□□□□□ -0.38
SF3B2-215ENST00000534307 DGKQP52824 942 aa12.69□□□□□ -0.38
SF3B2-215ENST00000534307 C17orf67Q0P5P2 114 aa12.69□□□□□ -0.38
SF3B2-215ENST00000534307 MYBPHQ13203 477 aa12.69□□□□□ -0.38
SF3B2-215ENST00000534307 SMU1Q2TAY7 513 aa12.69□□□□□ -0.38
SF3B2-215ENST00000534307 GLYR1Q49A26 553 aaPredicted RBP12.69□□□□□ -0.38
SF3B2-215ENST00000534307 CEP85LQ5SZL2 805 aa12.69□□□□□ -0.38
SF3B2-215ENST00000534307 FIGNL1Q6PIW4 674 aa12.69□□□□□ -0.38
SF3B2-215ENST00000534307 SZRD1Q7Z422 152 aa12.69□□□□□ -0.38
SF3B2-215ENST00000534307 GALNT10Q86SR1 603 aa12.69□□□□□ -0.38
SF3B2-215ENST00000534307 NATD1Q8N6N6 113 aa12.69□□□□□ -0.38
SF3B2-215ENST00000534307 PPP1R14CQ8TAE6 165 aa12.69□□□□□ -0.38
SF3B2-215ENST00000534307 OTUB1Q96FW1 271 aaPredicted RBP12.69□□□□□ -0.38
SF3B2-215ENST00000534307 PGM2Q96G03 612 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms