RNA–Protein interactions for RNA: ENST00000534234.5

COPB1-211, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 5

Gene COPB1, Length 1,584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-211ENST00000534234 C1GALT1C1Q96EU7 318 aa8.04□□□□□ -1.12
COPB1-211ENST00000534234 APOPT1Q96IL0 206 aa8.04□□□□□ -1.12
COPB1-211ENST00000534234 FCRL1Q96LA6 429 aa8.04□□□□□ -1.12
COPB1-211ENST00000534234 FAM111AQ96PZ2 611 aa8.04□□□□□ -1.12
COPB1-211ENST00000534234 PIGQQ9BRB3 760 aa8.04□□□□□ -1.12
COPB1-211ENST00000534234 TMUB1Q9BVT8 246 aa8.04□□□□□ -1.12
COPB1-211ENST00000534234 PINK1Q9BXM7 581 aa8.04□□□□□ -1.12
COPB1-211ENST00000534234 EML4Q9HC35 981 aaKnown RBP8.04□□□□□ -1.12
COPB1-211ENST00000534234 ACSS1Q9NUB1 689 aaPredicted RBP8.04□□□□□ -1.12
COPB1-211ENST00000534234 NTMQ9P121 344 aa8.04□□□□□ -1.12
COPB1-211ENST00000534234 TMED5Q9Y3A6 229 aa8.04□□□□□ -1.12
COPB1-211ENST00000534234 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.03□□□□□ -1.12
COPB1-211ENST00000534234 IGLV3-32A0A0A0MS00 114 aa8.03□□□□□ -1.12
COPB1-211ENST00000534234 SH3D21A4FU49 640 aa8.03□□□□□ -1.12
COPB1-211ENST00000534234 TMEM233B4DJY2 109 aa8.03□□□□□ -1.12
COPB1-211ENST00000534234 LSM1O15116 133 aaKnown RBP8.03□□□□□ -1.12
COPB1-211ENST00000534234 EMC8O43402 210 aa8.03□□□□□ -1.12
COPB1-211ENST00000534234 NDUFB5O43674 189 aa8.03□□□□□ -1.12
COPB1-211ENST00000534234 NPHS1O60500 1241 aa8.03□□□□□ -1.12
COPB1-211ENST00000534234 SPAG7O75391 227 aa8.03□□□□□ -1.12
COPB1-211ENST00000534234 GOSR1O95249 250 aa8.03□□□□□ -1.12
COPB1-211ENST00000534234 BCKDHAP12694 445 aa8.03□□□□□ -1.12
COPB1-211ENST00000534234 CPOXP36551 454 aa8.03□□□□□ -1.12
COPB1-211ENST00000534234 KIR2DL2P43627 348 aaPredicted RBP8.03□□□□□ -1.12
COPB1-211ENST00000534234 ASMTP46597 345 aa8.03□□□□□ -1.12
COPB1-211ENST00000534234 RPS3AP61247 264 aaKnown RBP8.03□□□□□ -1.12
COPB1-211ENST00000534234 PPP2R2AP63151 447 aa8.03□□□□□ -1.12
COPB1-211ENST00000534234 IFFO1Q0D2I5 559 aa8.03□□□□□ -1.12
COPB1-211ENST00000534234 PDE7AQ13946 482 aa8.03□□□□□ -1.12
COPB1-211ENST00000534234 KEAP1Q14145 624 aa8.03□□□□□ -1.12
COPB1-211ENST00000534234 POU4F3Q15319 338 aa8.03□□□□□ -1.12
COPB1-211ENST00000534234 SGCBQ16585 318 aa8.03□□□□□ -1.12
COPB1-211ENST00000534234 VWA1Q6PCB0 445 aa8.03□□□□□ -1.12
COPB1-211ENST00000534234 R3HCC1LQ7Z5L2 792 aaKnown RBP8.03□□□□□ -1.12
COPB1-211ENST00000534234 CAMKMTQ7Z624 323 aa8.03□□□□□ -1.12
COPB1-211ENST00000534234 BTLAQ7Z6A9 289 aa8.03□□□□□ -1.12
COPB1-211ENST00000534234 TRABD2AQ86V40 505 aa8.03□□□□□ -1.12
COPB1-211ENST00000534234 TGIF2LYQ8IUE0 185 aa8.03□□□□□ -1.12
COPB1-211ENST00000534234 OR6Y1Q8NGX8 325 aa8.03□□□□□ -1.12
COPB1-211ENST00000534234 FNDC9Q8TBE3 224 aa8.03□□□□□ -1.12
COPB1-211ENST00000534234 TWIST2Q8WVJ9 160 aa8.03□□□□□ -1.12
COPB1-211ENST00000534234 SMPDL3BQ92485 455 aa8.03□□□□□ -1.12
COPB1-211ENST00000534234 HOXB13Q92826 284 aaPredicted RBP8.03□□□□□ -1.12
COPB1-211ENST00000534234 MTERF3Q96E29 417 aa8.03□□□□□ -1.12
COPB1-211ENST00000534234 GIMAP5Q96F15 307 aa8.03□□□□□ -1.12
COPB1-211ENST00000534234 PGM2Q96G03 612 aa8.03□□□□□ -1.12
COPB1-211ENST00000534234 C16orf58Q96GQ5 468 aa8.03□□□□□ -1.12
COPB1-211ENST00000534234 ALPK1Q96QP1 1244 aa8.03□□□□□ -1.12
COPB1-211ENST00000534234 MECRQ9BV79 373 aa8.03□□□□□ -1.12
COPB1-211ENST00000534234 PLEKHF2Q9H8W4 249 aa8.03□□□□□ -1.12
COPB1-211ENST00000534234 ANKZF1Q9H8Y5 726 aa8.03□□□□□ -1.12
COPB1-211ENST00000534234 MKS1Q9NXB0 559 aa8.03□□□□□ -1.12
COPB1-211ENST00000534234 SLC17A7Q9P2U7 560 aa8.03□□□□□ -1.12
COPB1-211ENST00000534234 STOML1Q9UBI4 398 aa8.03□□□□□ -1.12
COPB1-211ENST00000534234 AP4B1Q9Y6B7 739 aa8.03□□□□□ -1.12
COPB1-211ENST00000534234 ANKRD17O75179 2603 aaKnown RBP8.03□□□□□ -1.12
COPB1-211ENST00000534234 CELSR1Q9NYQ6 3014 aa8.03□□□□□ -1.12
COPB1-211ENST00000534234 TMEM114B3SHH9 223 aa8.02□□□□□ -1.13
COPB1-211ENST00000534234 SHISA8B8ZZ34 492 aa8.02□□□□□ -1.13
COPB1-211ENST00000534234 ALG1L2C9J202 215 aa8.02□□□□□ -1.13
COPB1-211ENST00000534234 PIP5K1BO14986 540 aa8.02□□□□□ -1.13
COPB1-211ENST00000534234 PEX11AO75192 247 aa8.02□□□□□ -1.13
COPB1-211ENST00000534234 KCNK2O95069 426 aa8.02□□□□□ -1.13
COPB1-211ENST00000534234 SLU7O95391 586 aaKnown RBP8.02□□□□□ -1.13
COPB1-211ENST00000534234 OXSR1O95747 527 aaPredicted RBP8.02□□□□□ -1.13
COPB1-211ENST00000534234 RAF1P04049 648 aa8.02□□□□□ -1.13
COPB1-211ENST00000534234 HRGP04196 525 aa8.02□□□□□ -1.13
COPB1-211ENST00000534234 ALOX5P09917 674 aa8.02□□□□□ -1.13
COPB1-211ENST00000534234 NUDT17P0C025 328 aa8.02□□□□□ -1.13
COPB1-211ENST00000534234 ACP2P11117 423 aa8.02□□□□□ -1.13
COPB1-211ENST00000534234 HPGDP15428 266 aa8.02□□□□□ -1.13
COPB1-211ENST00000534234 KLK2P20151 261 aa8.02□□□□□ -1.13
COPB1-211ENST00000534234 EFNA1P20827 205 aaPredicted RBP8.02□□□□□ -1.13
COPB1-211ENST00000534234 TBXA2RP21731 343 aa8.02□□□□□ -1.13
COPB1-211ENST00000534234 PON3Q15166 354 aa8.02□□□□□ -1.13
COPB1-211ENST00000534234 DUSP5Q16690 384 aa8.02□□□□□ -1.13
COPB1-211ENST00000534234 MFSD12Q6NUT3 480 aa8.02□□□□□ -1.13
COPB1-211ENST00000534234 ZCCHC12Q6PEW1 402 aa8.02□□□□□ -1.13
COPB1-211ENST00000534234 FIGNL1Q6PIW4 674 aa8.02□□□□□ -1.13
COPB1-211ENST00000534234 ZNF474Q6S9Z5 364 aaPredicted RBP8.02□□□□□ -1.13
COPB1-211ENST00000534234 PAMR1Q6UXH9 720 aa8.02□□□□□ -1.13
COPB1-211ENST00000534234 LRIG3Q6UXM1 1119 aa8.02□□□□□ -1.13
COPB1-211ENST00000534234 RIBC1Q8N443 379 aaPredicted RBP8.02□□□□□ -1.13
COPB1-211ENST00000534234 FBXO30Q8TB52 745 aa8.02□□□□□ -1.13
COPB1-211ENST00000534234 FAM110BQ8TC76 370 aa8.02□□□□□ -1.13
COPB1-211ENST00000534234 AGR3Q8TD06 166 aa8.02□□□□□ -1.13
COPB1-211ENST00000534234 TCP10LQ8TDR4 215 aa8.02□□□□□ -1.13
COPB1-211ENST00000534234 MBD6Q96DN6 1003 aa8.02□□□□□ -1.13
COPB1-211ENST00000534234 ZNF845Q96IR2 970 aaPredicted RBP8.02□□□□□ -1.13
COPB1-211ENST00000534234 PPP3R2Q96LZ3 170 aa8.02□□□□□ -1.13
COPB1-211ENST00000534234 WFIKKN1Q96NZ8 548 aa8.02□□□□□ -1.13
COPB1-211ENST00000534234 MS4A4EQ96PG1 132 aa8.02□□□□□ -1.13
COPB1-211ENST00000534234 ROPN1BQ9BZX4 212 aaPredicted RBP8.02□□□□□ -1.13
COPB1-211ENST00000534234 OPN3Q9H1Y3 402 aaPredicted RBP8.02□□□□□ -1.13
COPB1-211ENST00000534234 RNF122Q9H9V4 155 aa8.02□□□□□ -1.13
COPB1-211ENST00000534234 ROPN1Q9HAT0 212 aaPredicted RBP8.02□□□□□ -1.13
COPB1-211ENST00000534234 HHATLQ9HCP6 504 aa8.02□□□□□ -1.13
COPB1-211ENST00000534234 FBXO34Q9NWN3 711 aa8.02□□□□□ -1.13
COPB1-211ENST00000534234 GIMAP2Q9UG22 337 aa8.02□□□□□ -1.13
COPB1-211ENST00000534234 VDAC3Q9Y277 283 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms