RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 TUBGCP3Q96CW5 907 aa8.7□□□□□ -1.02
SSBP3-215ENST00000533946 TMCO6Q96DC7 493 aa8.7□□□□□ -1.02
SSBP3-215ENST00000533946 ERP27Q96DN0 273 aa8.7□□□□□ -1.02
SSBP3-215ENST00000533946 SH3YL1Q96HL8 342 aaPredicted RBP8.7□□□□□ -1.02
SSBP3-215ENST00000533946 TRMOQ9BU70 441 aa8.7□□□□□ -1.02
SSBP3-215ENST00000533946 MCCC2Q9HCC0 563 aa8.7□□□□□ -1.02
SSBP3-215ENST00000533946 GPATCH2Q9NW75 528 aa8.7□□□□□ -1.02
SSBP3-215ENST00000533946 PPP4R1LQ9P1A2 415 aa8.7□□□□□ -1.02
SSBP3-215ENST00000533946 KCNE5Q9UJ90 142 aa8.7□□□□□ -1.02
SSBP3-215ENST00000533946 VDAC3Q9Y277 283 aa8.7□□□□□ -1.02
SSBP3-215ENST00000533946 SNX8Q9Y5X2 465 aa8.7□□□□□ -1.02
SSBP3-215ENST00000533946 MED13LQ71F56 2210 aa8.7□□□□□ -1.02
SSBP3-215ENST00000533946 FREM1Q5H8C1 2179 aa8.69□□□□□ -1.02
SSBP3-215ENST00000533946 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.69□□□□□ -1.02
SSBP3-215ENST00000533946 PRAMEF27A3QJZ7 478 aa8.69□□□□□ -1.02
SSBP3-215ENST00000533946 H0Y3Z8 333 aa8.69□□□□□ -1.02
SSBP3-215ENST00000533946 RGS16O15492 202 aaPredicted RBP8.69□□□□□ -1.02
SSBP3-215ENST00000533946 SIAH2O43255 324 aa8.69□□□□□ -1.02
SSBP3-215ENST00000533946 SEC14L5O43304 696 aa8.69□□□□□ -1.02
SSBP3-215ENST00000533946 TBX19O60806 448 aa8.69□□□□□ -1.02
SSBP3-215ENST00000533946 SCN2BO60939 215 aa8.69□□□□□ -1.02
SSBP3-215ENST00000533946 TNFSF13O75888 250 aa8.69□□□□□ -1.02
SSBP3-215ENST00000533946 BCAS2O75934 225 aaPredicted RBP8.69□□□□□ -1.02
SSBP3-215ENST00000533946 AQP8O94778 261 aa8.69□□□□□ -1.02
SSBP3-215ENST00000533946 HSPA4LO95757 839 aa8.69□□□□□ -1.02
SSBP3-215ENST00000533946 ANGPTL1O95841 491 aa8.69□□□□□ -1.02
SSBP3-215ENST00000533946 GABRA1P14867 456 aa8.69□□□□□ -1.02
SSBP3-215ENST00000533946 CPN1P15169 458 aa8.69□□□□□ -1.02
SSBP3-215ENST00000533946 HK1P19367 917 aa8.69□□□□□ -1.02
SSBP3-215ENST00000533946 ELAVL4P26378 380 aaKnown RBP8.69□□□□□ -1.02
SSBP3-215ENST00000533946 IL12AP29459 219 aa8.69□□□□□ -1.02
SSBP3-215ENST00000533946 ABCE1P61221 599 aaKnown RBP8.69□□□□□ -1.02
SSBP3-215ENST00000533946 HBA1P69905 142 aa8.69□□□□□ -1.02
SSBP3-215ENST00000533946 BST1Q10588 318 aa8.69□□□□□ -1.02
SSBP3-215ENST00000533946 MYBPHQ13203 477 aa8.69□□□□□ -1.02
SSBP3-215ENST00000533946 POU4F3Q15319 338 aa8.69□□□□□ -1.02
SSBP3-215ENST00000533946 TESK1Q15569 626 aa8.69□□□□□ -1.02
SSBP3-215ENST00000533946 TMEM44Q2T9K0 475 aa8.69□□□□□ -1.02
SSBP3-215ENST00000533946 PGS1Q32NB8 556 aa8.69□□□□□ -1.02
SSBP3-215ENST00000533946 CBLN3Q6UW01 205 aa8.69□□□□□ -1.02
SSBP3-215ENST00000533946 MAVSQ7Z434 540 aa8.69□□□□□ -1.02
SSBP3-215ENST00000533946 LUZP2Q86TE4 346 aa8.69□□□□□ -1.02
SSBP3-215ENST00000533946 GGNQ86UU5 652 aa8.69□□□□□ -1.02
SSBP3-215ENST00000533946 IFNEQ86WN2 208 aa8.69□□□□□ -1.02
SSBP3-215ENST00000533946 FNDC5Q8NAU1 212 aa8.69□□□□□ -1.02
SSBP3-215ENST00000533946 OR4K17Q8NGC6 315 aa8.69□□□□□ -1.02
SSBP3-215ENST00000533946 SMPDL3BQ92485 455 aa8.69□□□□□ -1.02
SSBP3-215ENST00000533946 COQ8BQ96D53 544 aa8.69□□□□□ -1.02
SSBP3-215ENST00000533946 C1GALT1C1Q96EU7 318 aa8.69□□□□□ -1.02
SSBP3-215ENST00000533946 C14orf79Q96F83 325 aa8.69□□□□□ -1.02
SSBP3-215ENST00000533946 MARK4Q96L34 752 aa8.69□□□□□ -1.02
SSBP3-215ENST00000533946 SFXN2Q96NB2 322 aa8.69□□□□□ -1.02
SSBP3-215ENST00000533946 PIGQQ9BRB3 760 aa8.69□□□□□ -1.02
SSBP3-215ENST00000533946 GPATCH1Q9BRR8 931 aaKnown RBP8.69□□□□□ -1.02
SSBP3-215ENST00000533946 NUF2Q9BZD4 464 aa8.69□□□□□ -1.02
SSBP3-215ENST00000533946 WDR55Q9H6Y2 383 aaPredicted RBP8.69□□□□□ -1.02
SSBP3-215ENST00000533946 TMEM185BQ9H7F4 350 aa8.69□□□□□ -1.02
SSBP3-215ENST00000533946 KCNK9Q9NPC2 374 aa8.69□□□□□ -1.02
SSBP3-215ENST00000533946 JKAMPQ9P055 326 aa8.69□□□□□ -1.02
SSBP3-215ENST00000533946 DKKL1Q9UK85 242 aa8.69□□□□□ -1.02
SSBP3-215ENST00000533946 CLEC4AQ9UMR7 237 aa8.69□□□□□ -1.02
SSBP3-215ENST00000533946 NIPBLQ6KC79 2804 aaeCLIP8.68□□□□□ -1.02
SSBP3-215ENST00000533946 ZANQ9Y493 2812 aa8.68□□□□□ -1.02
SSBP3-215ENST00000533946 GOLGA8QA0A0J9YX86 632 aa8.68□□□□□ -1.02
SSBP3-215ENST00000533946 A0A1W2PRB8 838 aa8.68□□□□□ -1.02
SSBP3-215ENST00000533946 GOLGA8OA6NCC3 632 aa8.68□□□□□ -1.02
SSBP3-215ENST00000533946 CD8B2A6NJW9 211 aa8.68□□□□□ -1.02
SSBP3-215ENST00000533946 EEF1E1-BLOC1S5C9J1V9 151 aa8.68□□□□□ -1.02
SSBP3-215ENST00000533946 GOLGA8NF8WBI6 632 aa8.68□□□□□ -1.02
SSBP3-215ENST00000533946 H3BML4 177 aa8.68□□□□□ -1.02
SSBP3-215ENST00000533946 SYT5O00445 386 aa8.68□□□□□ -1.02
SSBP3-215ENST00000533946 SDHDO14521 159 aa8.68□□□□□ -1.02
SSBP3-215ENST00000533946 EEF1E1O43324 174 aaKnown RBP8.68□□□□□ -1.02
SSBP3-215ENST00000533946 EMC8O43402 210 aa8.68□□□□□ -1.02
SSBP3-215ENST00000533946 COQ9O75208 318 aa8.68□□□□□ -1.02
SSBP3-215ENST00000533946 ACTL6AO96019 429 aa8.68□□□□□ -1.02
SSBP3-215ENST00000533946 TMIGD3P0DMS9 266 aaPredicted RBP8.68□□□□□ -1.02
SSBP3-215ENST00000533946 PSMA4P25789 261 aaKnown RBP8.68□□□□□ -1.02
SSBP3-215ENST00000533946 TIMP3P35625 211 aa8.68□□□□□ -1.02
SSBP3-215ENST00000533946 SLC1A6P48664 564 aa8.68□□□□□ -1.02
SSBP3-215ENST00000533946 PRIM2P49643 509 aa8.68□□□□□ -1.02
SSBP3-215ENST00000533946 DGKQP52824 942 aa8.68□□□□□ -1.02
SSBP3-215ENST00000533946 PLAURQ03405 335 aa8.68□□□□□ -1.02
SSBP3-215ENST00000533946 FAM27E3Q08E93 113 aa8.68□□□□□ -1.02
SSBP3-215ENST00000533946 FUT5Q11128 374 aa8.68□□□□□ -1.02
SSBP3-215ENST00000533946 EFR3AQ14156 821 aa8.68□□□□□ -1.02
SSBP3-215ENST00000533946 DECR1Q16698 335 aa8.68□□□□□ -1.02
SSBP3-215ENST00000533946 CPTPQ5TA50 214 aa8.68□□□□□ -1.02
SSBP3-215ENST00000533946 RAET1LQ5VY80 246 aa8.68□□□□□ -1.02
SSBP3-215ENST00000533946 BTLAQ7Z6A9 289 aa8.68□□□□□ -1.02
SSBP3-215ENST00000533946 LACC1Q8IV20 430 aa8.68□□□□□ -1.02
SSBP3-215ENST00000533946 SAMD14Q8IZD0 417 aaPredicted RBP8.68□□□□□ -1.02
SSBP3-215ENST00000533946 FNDC9Q8TBE3 224 aa8.68□□□□□ -1.02
SSBP3-215ENST00000533946 ZPLD1Q8TCW7 415 aa8.68□□□□□ -1.02
SSBP3-215ENST00000533946 JADE3Q92613 823 aa8.68□□□□□ -1.02
SSBP3-215ENST00000533946 ARL8AQ96BM9 186 aa8.68□□□□□ -1.02
SSBP3-215ENST00000533946 ZG16BQ96DA0 208 aa8.68□□□□□ -1.02
SSBP3-215ENST00000533946 STARD4Q96DR4 205 aa8.68□□□□□ -1.02
SSBP3-215ENST00000533946 PAIP2Q9BPZ3 127 aaKnown RBP8.68□□□□□ -1.02
SSBP3-215ENST00000533946 STMN4Q9H169 189 aaPredicted RBP8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms