RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 RPL3P39023 403 aaKnown RBP9.45□□□□□ -0.9
CAPN1-225ENST00000533704 CPA2P48052 419 aa9.45□□□□□ -0.9
CAPN1-225ENST00000533704 PRIM2P49643 509 aa9.45□□□□□ -0.9
CAPN1-225ENST00000533704 CLDN18P56856 261 aa9.45□□□□□ -0.9
CAPN1-225ENST00000533704 B3GALT5-AS1P59052 145 aa9.45□□□□□ -0.9
CAPN1-225ENST00000533704 PRR5P85299 388 aa9.45□□□□□ -0.9
CAPN1-225ENST00000533704 FOXF2Q12947 444 aa9.45□□□□□ -0.9
CAPN1-225ENST00000533704 TP53BP2Q13625 1128 aa9.45□□□□□ -0.9
CAPN1-225ENST00000533704 CHI3L2Q15782 390 aa9.45□□□□□ -0.9
CAPN1-225ENST00000533704 DUSP5Q16690 384 aa9.45□□□□□ -0.9
CAPN1-225ENST00000533704 C6orf136Q5SQH8 315 aa9.45□□□□□ -0.9
CAPN1-225ENST00000533704 CEP85LQ5SZL2 805 aa9.45□□□□□ -0.9
CAPN1-225ENST00000533704 CCNJQ5T5M9 372 aa9.45□□□□□ -0.9
CAPN1-225ENST00000533704 CPTPQ5TA50 214 aa9.45□□□□□ -0.9
CAPN1-225ENST00000533704 FBXW10Q5XX13 1052 aa9.45□□□□□ -0.9
CAPN1-225ENST00000533704 PPP4R4Q6NUP7 873 aa9.45□□□□□ -0.9
CAPN1-225ENST00000533704 LRIG3Q6UXM1 1119 aa9.45□□□□□ -0.9
CAPN1-225ENST00000533704 LUZP2Q86TE4 346 aa9.45□□□□□ -0.9
CAPN1-225ENST00000533704 MEIOBQ8N635 442 aa9.45□□□□□ -0.9
CAPN1-225ENST00000533704 KRTCAP2Q8N6L1 136 aa9.45□□□□□ -0.9
CAPN1-225ENST00000533704 SLC16A11Q8NCK7 471 aa9.45□□□□□ -0.9
CAPN1-225ENST00000533704 RNF138Q8WVD3 245 aa9.45□□□□□ -0.9
CAPN1-225ENST00000533704 NRGNQ92686 78 aa9.45□□□□□ -0.9
CAPN1-225ENST00000533704 GIMAP5Q96F15 307 aa9.45□□□□□ -0.9
CAPN1-225ENST00000533704 ZNF764Q96H86 408 aaPredicted RBP9.45□□□□□ -0.9
CAPN1-225ENST00000533704 SH3GL2Q99962 352 aa9.45□□□□□ -0.9
CAPN1-225ENST00000533704 PAIP2Q9BPZ3 127 aaKnown RBP9.45□□□□□ -0.9
CAPN1-225ENST00000533704 TMEM109Q9BVC6 243 aa9.45□□□□□ -0.9
CAPN1-225ENST00000533704 ZNF395Q9H8N7 513 aaPredicted RBP9.45□□□□□ -0.9
CAPN1-225ENST00000533704 KCNK9Q9NPC2 374 aa9.45□□□□□ -0.9
CAPN1-225ENST00000533704 ACSS1Q9NUB1 689 aaPredicted RBP9.45□□□□□ -0.9
CAPN1-225ENST00000533704 DNAJB12Q9NXW2 375 aaKnown RBP9.45□□□□□ -0.9
CAPN1-225ENST00000533704 CRIM1Q9NZV1 1036 aa9.45□□□□□ -0.9
CAPN1-225ENST00000533704 ATP6V1HQ9UI12 483 aa9.45□□□□□ -0.9
CAPN1-225ENST00000533704 EIF3LQ9Y262 564 aaKnown RBP9.45□□□□□ -0.9
CAPN1-225ENST00000533704 VDAC3Q9Y277 283 aa9.45□□□□□ -0.9
CAPN1-225ENST00000533704 HEATR5AQ86XA9 2040 aa9.44□□□□□ -0.9
CAPN1-225ENST00000533704 OTOGQ6ZRI0 2925 aa9.44□□□□□ -0.9
CAPN1-225ENST00000533704 OR2M5A3KFT3 312 aa9.44□□□□□ -0.9
CAPN1-225ENST00000533704 SLC22A20A6NK97 555 aa9.44□□□□□ -0.9
CAPN1-225ENST00000533704 NDUFB5O43674 189 aa9.44□□□□□ -0.9
CAPN1-225ENST00000533704 ITM2AO43736 263 aa9.44□□□□□ -0.9
CAPN1-225ENST00000533704 C6orf47O95873 294 aa9.44□□□□□ -0.9
CAPN1-225ENST00000533704 SERPINE1P05121 402 aa9.44□□□□□ -0.9
CAPN1-225ENST00000533704 HMGN2P05204 90 aaKnown RBP9.44□□□□□ -0.9
CAPN1-225ENST00000533704 IFI6P09912 130 aa9.44□□□□□ -0.9
CAPN1-225ENST00000533704 HPGDP15428 266 aa9.44□□□□□ -0.9
CAPN1-225ENST00000533704 ZNF708P17019 499 aa9.44□□□□□ -0.9
CAPN1-225ENST00000533704 SOAT1P35610 550 aa9.44□□□□□ -0.9
CAPN1-225ENST00000533704 FRKP42685 505 aaPredicted RBP9.44□□□□□ -0.9
CAPN1-225ENST00000533704 ETV4P43268 484 aa9.44□□□□□ -0.9
CAPN1-225ENST00000533704 RNF144AP50876 292 aaPredicted RBP9.44□□□□□ -0.9
CAPN1-225ENST00000533704 C17orf67Q0P5P2 114 aa9.44□□□□□ -0.9
CAPN1-225ENST00000533704 GANABQ14697 944 aaKnown RBP9.44□□□□□ -0.9
CAPN1-225ENST00000533704 LASP1Q14847 261 aaKnown RBP9.44□□□□□ -0.9
CAPN1-225ENST00000533704 PGS1Q32NB8 556 aa9.44□□□□□ -0.9
CAPN1-225ENST00000533704 FLYWCH1Q4VC44 716 aa9.44□□□□□ -0.9
CAPN1-225ENST00000533704 MFSD12Q6NUT3 480 aa9.44□□□□□ -0.9
CAPN1-225ENST00000533704 POMZP3Q6PJE2 187 aa9.44□□□□□ -0.9
CAPN1-225ENST00000533704 APOOLQ6UXV4 268 aa9.44□□□□□ -0.9
CAPN1-225ENST00000533704 ZAR1Q86SH2 424 aa9.44□□□□□ -0.9
CAPN1-225ENST00000533704 KIF18BQ86Y91 864 aa9.44□□□□□ -0.9
CAPN1-225ENST00000533704 CNEP1R1Q8N9A8 125 aa9.44□□□□□ -0.9
CAPN1-225ENST00000533704 CDS1Q92903 461 aa9.44□□□□□ -0.9
CAPN1-225ENST00000533704 WNT2BQ93097 391 aa9.44□□□□□ -0.9
CAPN1-225ENST00000533704 FAM120BQ96EK7 910 aaKnown RBP9.44□□□□□ -0.9
CAPN1-225ENST00000533704 C1GALT1C1Q96EU7 318 aa9.44□□□□□ -0.9
CAPN1-225ENST00000533704 SH3YL1Q96HL8 342 aaPredicted RBP9.44□□□□□ -0.9
CAPN1-225ENST00000533704 PRPF18Q99633 342 aaKnown RBP9.44□□□□□ -0.9
CAPN1-225ENST00000533704 GPATCH1Q9BRR8 931 aaKnown RBP9.44□□□□□ -0.9
CAPN1-225ENST00000533704 G6PC3Q9BUM1 346 aa9.44□□□□□ -0.9
CAPN1-225ENST00000533704 RBM24Q9BX46 236 aaKnown RBP9.44□□□□□ -0.9
CAPN1-225ENST00000533704 POLDIP3Q9BY77 421 aaKnown RBP9.44□□□□□ -0.9
CAPN1-225ENST00000533704 ATAD3AQ9NVI7 634 aa9.44□□□□□ -0.9
CAPN1-225ENST00000533704 FBXO34Q9NWN3 711 aa9.44□□□□□ -0.9
CAPN1-225ENST00000533704 CLCF1Q9UBD9 225 aa9.44□□□□□ -0.9
CAPN1-225ENST00000533704 FOXD3Q9UJU5 478 aaPredicted RBP9.44□□□□□ -0.9
CAPN1-225ENST00000533704 MRPS18CQ9Y3D5 142 aaKnown RBP9.44□□□□□ -0.9
CAPN1-225ENST00000533704 ZNF337Q9Y3M9 751 aa9.44□□□□□ -0.9
CAPN1-225ENST00000533704 NPIPA5A0A0B4J1W7 369 aa9.43□□□□□ -0.9
CAPN1-225ENST00000533704 TUBAL3A6NHL2 446 aa9.43□□□□□ -0.9
CAPN1-225ENST00000533704 ESPNB1AK53 854 aa9.43□□□□□ -0.9
CAPN1-225ENST00000533704 NPIPA7E9PJI5 369 aa9.43□□□□□ -0.9
CAPN1-225ENST00000533704 H0YC42 278 aa9.43□□□□□ -0.9
CAPN1-225ENST00000533704 SCDO00767 359 aa9.43□□□□□ -0.9
CAPN1-225ENST00000533704 SMNDC1O75940 238 aaKnown RBP eCLIP9.43□□□□□ -0.9
CAPN1-225ENST00000533704 KCNK2O95069 426 aa9.43□□□□□ -0.9
CAPN1-225ENST00000533704 RCBTB2O95199 551 aa9.43□□□□□ -0.9
CAPN1-225ENST00000533704 OXSR1O95747 527 aaPredicted RBP9.43□□□□□ -0.9
CAPN1-225ENST00000533704 TGM6O95932 706 aa9.43□□□□□ -0.9
CAPN1-225ENST00000533704 IL18BPO95998 194 aa9.43□□□□□ -0.9
CAPN1-225ENST00000533704 MYZAPP0CAP1 466 aa9.43□□□□□ -0.9
CAPN1-225ENST00000533704 NPIPA8P0DM63 369 aa9.43□□□□□ -0.9
CAPN1-225ENST00000533704 G6PDP11413 515 aa9.43□□□□□ -0.9
CAPN1-225ENST00000533704 PRPS1L1P21108 318 aa9.43□□□□□ -0.9
CAPN1-225ENST00000533704 BGNP21810 368 aa9.43□□□□□ -0.9
CAPN1-225ENST00000533704 CPOXP36551 454 aa9.43□□□□□ -0.9
CAPN1-225ENST00000533704 CCT3P49368 545 aaKnown RBP9.43□□□□□ -0.9
CAPN1-225ENST00000533704 TPD52P55327 224 aaPredicted RBP9.43□□□□□ -0.9
CAPN1-225ENST00000533704 ABCE1P61221 599 aaKnown RBP9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms