RNA–Protein interactions for RNA: ENST00000533242.1

NEDD8-207, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 1 (best)

Gene NEDD8, Length 2,300 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-207ENST00000533242 TMED1Q13445 227 aa7.63□□□□□ -1.19
NEDD8-207ENST00000533242 KRTCAP3Q53RY4 240 aa7.63□□□□□ -1.19
NEDD8-207ENST00000533242 ABHD17BQ5VST6 288 aa7.63□□□□□ -1.19
NEDD8-207ENST00000533242 FAAH2Q6GMR7 532 aa7.63□□□□□ -1.19
NEDD8-207ENST00000533242 RNF44Q7L0R7 432 aa7.63□□□□□ -1.19
NEDD8-207ENST00000533242 FAM9CQ8IZT9 166 aa7.63□□□□□ -1.19
NEDD8-207ENST00000533242 SLC15A4Q8N697 577 aa7.63□□□□□ -1.19
NEDD8-207ENST00000533242 DRAXINQ8NBI3 349 aaPredicted RBP7.63□□□□□ -1.19
NEDD8-207ENST00000533242 PHF10Q8WUB8 498 aaKnown RBP7.63□□□□□ -1.19
NEDD8-207ENST00000533242 APH1BQ8WW43 257 aa7.63□□□□□ -1.19
NEDD8-207ENST00000533242 TBC1D20Q96BZ9 403 aa7.63□□□□□ -1.19
NEDD8-207ENST00000533242 GPR137Q96N19 417 aa7.63□□□□□ -1.19
NEDD8-207ENST00000533242 ACAT2Q9BWD1 397 aa7.63□□□□□ -1.19
NEDD8-207ENST00000533242 BRF2Q9HAW0 419 aa7.63□□□□□ -1.19
NEDD8-207ENST00000533242 PRM3Q9NNZ6 103 aa7.63□□□□□ -1.19
NEDD8-207ENST00000533242 WARS2Q9UGM6 360 aaKnown RBP7.63□□□□□ -1.19
NEDD8-207ENST00000533242 BAG5Q9UL15 447 aa7.63□□□□□ -1.19
NEDD8-207ENST00000533242 NDRG4Q9ULP0 352 aaKnown RBP7.63□□□□□ -1.19
NEDD8-207ENST00000533242 FAF1Q9UNN5 650 aaPredicted RBP7.63□□□□□ -1.19
NEDD8-207ENST00000533242 SCN2AQ99250 2005 aa7.62□□□□□ -1.19
NEDD8-207ENST00000533242 SH3PXD2BA1X283 911 aa7.62□□□□□ -1.19
NEDD8-207ENST00000533242 IDSB3KWA1 339 aa7.62□□□□□ -1.19
NEDD8-207ENST00000533242 E9PQ18 207 aa7.62□□□□□ -1.19
NEDD8-207ENST00000533242 J3KTA2 159 aa7.62□□□□□ -1.19
NEDD8-207ENST00000533242 HEXBP07686 556 aa7.62□□□□□ -1.19
NEDD8-207ENST00000533242 CELA2AP08217 269 aa7.62□□□□□ -1.19
NEDD8-207ENST00000533242 RRM2P31350 389 aa7.62□□□□□ -1.19
NEDD8-207ENST00000533242 DNAJA1P31689 397 aaKnown RBP7.62□□□□□ -1.19
NEDD8-207ENST00000533242 KRT20P35900 424 aa7.62□□□□□ -1.19
NEDD8-207ENST00000533242 LSM3P62310 102 aaKnown RBP7.62□□□□□ -1.19
NEDD8-207ENST00000533242 PMP22Q01453 160 aa7.62□□□□□ -1.19
NEDD8-207ENST00000533242 FOXD4Q12950 439 aaPredicted RBP7.62□□□□□ -1.19
NEDD8-207ENST00000533242 PCOLCEQ15113 449 aa7.62□□□□□ -1.19
NEDD8-207ENST00000533242 CDSNQ15517 529 aa7.62□□□□□ -1.19
NEDD8-207ENST00000533242 ZNF766Q5HY98 468 aa7.62□□□□□ -1.19
NEDD8-207ENST00000533242 MED27Q6P2C8 311 aa7.62□□□□□ -1.19
NEDD8-207ENST00000533242 FAHD1Q6P587 224 aa7.62□□□□□ -1.19
NEDD8-207ENST00000533242 GALNT18Q6P9A2 607 aa7.62□□□□□ -1.19
NEDD8-207ENST00000533242 ANGPTL8Q6UXH0 198 aa7.62□□□□□ -1.19
NEDD8-207ENST00000533242 CAMKMTQ7Z624 323 aa7.62□□□□□ -1.19
NEDD8-207ENST00000533242 LAPTM4BQ86VI4 370 aa7.62□□□□□ -1.19
NEDD8-207ENST00000533242 OR4A15Q8NGL6 344 aa7.62□□□□□ -1.19
NEDD8-207ENST00000533242 ATL1Q8WXF7 558 aa7.62□□□□□ -1.19
NEDD8-207ENST00000533242 ABTB1Q969K4 478 aaPredicted RBP7.62□□□□□ -1.19
NEDD8-207ENST00000533242 SGPP1Q9BX95 441 aa7.62□□□□□ -1.19
NEDD8-207ENST00000533242 DUSP21Q9H596 190 aa7.62□□□□□ -1.19
NEDD8-207ENST00000533242 PLGRKTQ9HBL7 147 aa7.62□□□□□ -1.19
NEDD8-207ENST00000533242 DMRT3Q9NQL9 472 aa7.62□□□□□ -1.19
NEDD8-207ENST00000533242 NDUFAF4Q9P032 175 aa7.62□□□□□ -1.19
NEDD8-207ENST00000533242 TINAGQ9UJW2 476 aa7.62□□□□□ -1.19
NEDD8-207ENST00000533242 PSME2Q9UL46 239 aa7.62□□□□□ -1.19
NEDD8-207ENST00000533242 TESMINQ9Y4I5 508 aa7.62□□□□□ -1.19
NEDD8-207ENST00000533242 KCNE2Q9Y6J6 123 aa7.62□□□□□ -1.19
NEDD8-207ENST00000533242 LOC105369274A0A096LPK9 316 aa7.62□□□□□ -1.19
NEDD8-207ENST00000533242 LOC102723532A0A0G2JNH3 316 aa7.62□□□□□ -1.19
NEDD8-207ENST00000533242 M0QX08 132 aa7.62□□□□□ -1.19
NEDD8-207ENST00000533242 M0R129 80 aa7.62□□□□□ -1.19
NEDD8-207ENST00000533242 TNFRSF21O75509 655 aa7.62□□□□□ -1.19
NEDD8-207ENST00000533242 MT-ND2P03891 347 aa7.62□□□□□ -1.19
NEDD8-207ENST00000533242 CCDC159P0C7I6 412 aa7.62□□□□□ -1.19
NEDD8-207ENST00000533242 IDUAP35475 653 aa7.62□□□□□ -1.19
NEDD8-207ENST00000533242 CRATP43155 626 aa7.62□□□□□ -1.19
NEDD8-207ENST00000533242 PSMD7P51665 324 aa7.62□□□□□ -1.19
NEDD8-207ENST00000533242 TUBA3CQ13748 450 aa7.62□□□□□ -1.19
NEDD8-207ENST00000533242 VEZF1Q14119 521 aa7.62□□□□□ -1.19
NEDD8-207ENST00000533242 DSG2Q14126 1118 aa7.62□□□□□ -1.19
NEDD8-207ENST00000533242 MAD2L1BPQ15013 274 aaPredicted RBP7.62□□□□□ -1.19
NEDD8-207ENST00000533242 NPTX1Q15818 432 aa7.62□□□□□ -1.19
NEDD8-207ENST00000533242 PRTGQ2VWP7 1150 aa7.62□□□□□ -1.19
NEDD8-207ENST00000533242 FRMPD2BQ6IN97 320 aa7.62□□□□□ -1.19
NEDD8-207ENST00000533242 TMEM205Q6UW68 189 aa7.62□□□□□ -1.19
NEDD8-207ENST00000533242 MEX3BQ6ZN04 569 aaKnown RBP7.62□□□□□ -1.19
NEDD8-207ENST00000533242 OR4N4Q8N0Y3 316 aa7.62□□□□□ -1.19
NEDD8-207ENST00000533242 ATG16L2Q8NAA4 619 aa7.62□□□□□ -1.19
NEDD8-207ENST00000533242 OR52J3Q8NH60 311 aa7.62□□□□□ -1.19
NEDD8-207ENST00000533242 RAB2BQ8WUD1 216 aa7.62□□□□□ -1.19
NEDD8-207ENST00000533242 RPL3LQ92901 407 aaKnown RBP7.62□□□□□ -1.19
NEDD8-207ENST00000533242 ZNF566Q969W8 418 aa7.62□□□□□ -1.19
NEDD8-207ENST00000533242 TAMM41Q96BW9 452 aa7.62□□□□□ -1.19
NEDD8-207ENST00000533242 MVB12AQ96EY5 273 aa7.62□□□□□ -1.19
NEDD8-207ENST00000533242 IMMP1LQ96LU5 166 aa7.62□□□□□ -1.19
NEDD8-207ENST00000533242 C10orf90Q96M02 699 aa7.62□□□□□ -1.19
NEDD8-207ENST00000533242 KCNC2Q96PR1 638 aa7.62□□□□□ -1.19
NEDD8-207ENST00000533242 TGIF2Q9GZN2 237 aa7.62□□□□□ -1.19
NEDD8-207ENST00000533242 MKKSQ9NPJ1 570 aaPredicted RBP7.62□□□□□ -1.19
NEDD8-207ENST00000533242 KRT84Q9NSB2 600 aa7.62□□□□□ -1.19
NEDD8-207ENST00000533242 STMN3Q9NZ72 180 aa7.62□□□□□ -1.19
NEDD8-207ENST00000533242 TEKT2Q9UIF3 430 aa7.62□□□□□ -1.19
NEDD8-207ENST00000533242 BTNL2Q9UIR0 455 aa7.62□□□□□ -1.19
NEDD8-207ENST00000533242 ENPP5Q9UJA9 477 aa7.62□□□□□ -1.19
NEDD8-207ENST00000533242 GMPPBQ9Y5P6 360 aa7.62□□□□□ -1.19
NEDD8-207ENST00000533242 HCFC1P51610 2035 aa7.62□□□□□ -1.19
NEDD8-207ENST00000533242 RTCAO00442 366 aaKnown RBP7.61□□□□□ -1.19
NEDD8-207ENST00000533242 RNASET2O00584 256 aaKnown RBP7.61□□□□□ -1.19
NEDD8-207ENST00000533242 FADS2O95864 444 aaKnown RBP7.61□□□□□ -1.19
NEDD8-207ENST00000533242 BCL10O95999 233 aa7.61□□□□□ -1.19
NEDD8-207ENST00000533242 KLK1P06870 262 aa7.61□□□□□ -1.19
NEDD8-207ENST00000533242 C1GALT1C1LP0DN25 315 aa7.61□□□□□ -1.19
NEDD8-207ENST00000533242 HSD3B1P14060 373 aa7.61□□□□□ -1.19
NEDD8-207ENST00000533242 HSD3B2P26439 372 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms