RNA–Protein interactions for RNA: ENST00000533079.5

CAPN1-223, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-223ENST00000533079 EBAG9O00559 213 aa11.14□□□□□ -0.63
CAPN1-223ENST00000533079 SEC14L5O43304 696 aa11.14□□□□□ -0.63
CAPN1-223ENST00000533079 TSPAN2O60636 221 aa11.14□□□□□ -0.63
CAPN1-223ENST00000533079 REM1O75628 298 aa11.14□□□□□ -0.63
CAPN1-223ENST00000533079 PLGP00747 810 aaPredicted RBP11.14□□□□□ -0.63
CAPN1-223ENST00000533079 GBAP04062 536 aa11.14□□□□□ -0.63
CAPN1-223ENST00000533079 SOD3P08294 240 aa11.14□□□□□ -0.63
CAPN1-223ENST00000533079 VIMP08670 466 aaKnown RBP11.14□□□□□ -0.63
CAPN1-223ENST00000533079 CRABP2P29373 138 aa11.14□□□□□ -0.63
CAPN1-223ENST00000533079 TYK2P29597 1187 aa11.14□□□□□ -0.63
CAPN1-223ENST00000533079 EMDP50402 254 aa11.14□□□□□ -0.63
CAPN1-223ENST00000533079 PNLIPRP2P54317 469 aa11.14□□□□□ -0.63
CAPN1-223ENST00000533079 GAS1P54826 345 aa11.14□□□□□ -0.63
CAPN1-223ENST00000533079 CLDN15P56746 228 aa11.14□□□□□ -0.63
CAPN1-223ENST00000533079 EXOSC7Q15024 291 aaKnown RBP11.14□□□□□ -0.63
CAPN1-223ENST00000533079 CCDC153Q494R4 210 aa11.14□□□□□ -0.63
CAPN1-223ENST00000533079 GLYR1Q49A26 553 aaPredicted RBP11.14□□□□□ -0.63
CAPN1-223ENST00000533079 GLIPR1L2Q4G1C9 344 aa11.14□□□□□ -0.63
CAPN1-223ENST00000533079 METTL2BQ6P1Q9 378 aaKnown RBP11.14□□□□□ -0.63
CAPN1-223ENST00000533079 L3MBTL4Q8NA19 623 aa11.14□□□□□ -0.63
CAPN1-223ENST00000533079 ZNF675Q8TD23 568 aa11.14□□□□□ -0.63
CAPN1-223ENST00000533079 MGARPQ8TDB4 240 aa11.14□□□□□ -0.63
CAPN1-223ENST00000533079 TRPC4APQ8TEL6 797 aa11.14□□□□□ -0.63
CAPN1-223ENST00000533079 SMAP2Q8WU79 429 aaPredicted RBP11.14□□□□□ -0.63
CAPN1-223ENST00000533079 ZNF75CPQ92670 426 aaPredicted RBP11.14□□□□□ -0.63
CAPN1-223ENST00000533079 C11orf24Q96F05 449 aaPredicted RBP11.14□□□□□ -0.63
CAPN1-223ENST00000533079 ADOQ96SZ5 270 aa11.14□□□□□ -0.63
CAPN1-223ENST00000533079 PTGES2Q9H7Z7 377 aa11.14□□□□□ -0.63
CAPN1-223ENST00000533079 ZBTB26Q9HCK0 441 aa11.14□□□□□ -0.63
CAPN1-223ENST00000533079 GLRX2Q9NS18 164 aa11.14□□□□□ -0.63
CAPN1-223ENST00000533079 FAIMQ9NVQ4 179 aa11.14□□□□□ -0.63
CAPN1-223ENST00000533079 AHSPQ9NZD4 102 aa11.14□□□□□ -0.63
CAPN1-223ENST00000533079 PPP4R1LQ9P1A2 415 aa11.14□□□□□ -0.63
CAPN1-223ENST00000533079 STOML1Q9UBI4 398 aa11.14□□□□□ -0.63
CAPN1-223ENST00000533079 CES1P1Q9UKY3 287 aa11.14□□□□□ -0.63
CAPN1-223ENST00000533079 PSME2Q9UL46 239 aa11.14□□□□□ -0.63
CAPN1-223ENST00000533079 ABCG2Q9UNQ0 655 aa11.14□□□□□ -0.63
CAPN1-223ENST00000533079 LIPT1Q9Y234 373 aa11.14□□□□□ -0.63
CAPN1-223ENST00000533079 MTO1Q9Y2Z2 717 aaKnown RBP11.14□□□□□ -0.63
CAPN1-223ENST00000533079 PCDHA9Q9Y5H5 950 aa11.14□□□□□ -0.63
CAPN1-223ENST00000533079 AP4B1Q9Y6B7 739 aa11.14□□□□□ -0.63
CAPN1-223ENST00000533079 HEATR5AQ86XA9 2040 aa11.13□□□□□ -0.63
CAPN1-223ENST00000533079 H3BML4 177 aa11.13□□□□□ -0.63
CAPN1-223ENST00000533079 UBXN8O00124 270 aa11.13□□□□□ -0.63
CAPN1-223ENST00000533079 ADAM11O75078 769 aa11.13□□□□□ -0.63
CAPN1-223ENST00000533079 IGHV4-39P01824 125 aa11.13□□□□□ -0.63
CAPN1-223ENST00000533079 HK1P19367 917 aa11.13□□□□□ -0.63
CAPN1-223ENST00000533079 EVI2BP34910 448 aa11.13□□□□□ -0.63
CAPN1-223ENST00000533079 CDKN1AP38936 164 aa11.13□□□□□ -0.63
CAPN1-223ENST00000533079 SERPINB4P48594 390 aa11.13□□□□□ -0.63
CAPN1-223ENST00000533079 SUCLG1P53597 346 aaKnown RBP11.13□□□□□ -0.63
CAPN1-223ENST00000533079 MAPK12P53778 367 aa11.13□□□□□ -0.63
CAPN1-223ENST00000533079 CTBP2P56545 445 aa11.13□□□□□ -0.63
CAPN1-223ENST00000533079 DSCR9P59020 149 aa11.13□□□□□ -0.63
CAPN1-223ENST00000533079 VLDLRP98155 873 aa11.13□□□□□ -0.63
CAPN1-223ENST00000533079 CPSF6Q16630 551 aaKnown RBP eCLIP11.13□□□□□ -0.63
CAPN1-223ENST00000533079 ZNF672Q499Z4 452 aaPredicted RBP11.13□□□□□ -0.63
CAPN1-223ENST00000533079 OR5M10Q6IEU7 315 aa11.13□□□□□ -0.63
CAPN1-223ENST00000533079 FAM111BQ6SJ93 734 aa11.13□□□□□ -0.63
CAPN1-223ENST00000533079 C6orf89Q6UWU4 347 aa11.13□□□□□ -0.63
CAPN1-223ENST00000533079 TBC1D1Q86TI0 1168 aaPredicted RBP11.13□□□□□ -0.63
CAPN1-223ENST00000533079 ISCA2Q86U28 154 aa11.13□□□□□ -0.63
CAPN1-223ENST00000533079 ANKS4BQ8N8V4 417 aa11.13□□□□□ -0.63
CAPN1-223ENST00000533079 STEAP2Q8NFT2 490 aa11.13□□□□□ -0.63
CAPN1-223ENST00000533079 OR2M3Q8NG83 312 aa11.13□□□□□ -0.63
CAPN1-223ENST00000533079 RHEBL1Q8TAI7 183 aa11.13□□□□□ -0.63
CAPN1-223ENST00000533079 LRRC8CQ8TDW0 803 aa11.13□□□□□ -0.63
CAPN1-223ENST00000533079 USB1Q9BQ65 265 aaKnown RBP11.13□□□□□ -0.63
CAPN1-223ENST00000533079 RHNO1Q9BSD3 238 aa11.13□□□□□ -0.63
CAPN1-223ENST00000533079 HDHD5Q9BXW7 423 aa11.13□□□□□ -0.63
CAPN1-223ENST00000533079 BEX2Q9BXY8 128 aa11.13□□□□□ -0.63
CAPN1-223ENST00000533079 ALG2Q9H553 416 aa11.13□□□□□ -0.63
CAPN1-223ENST00000533079 MANSC1Q9H8J5 431 aa11.13□□□□□ -0.63
CAPN1-223ENST00000533079 SDHAF3Q9NRP4 125 aa11.13□□□□□ -0.63
CAPN1-223ENST00000533079 SLC17A7Q9P2U7 560 aa11.13□□□□□ -0.63
CAPN1-223ENST00000533079 ZNF337Q9Y3M9 751 aa11.13□□□□□ -0.63
CAPN1-223ENST00000533079 OR2M5A3KFT3 312 aa11.12□□□□□ -0.63
CAPN1-223ENST00000533079 B4DXG7 233 aa11.12□□□□□ -0.63
CAPN1-223ENST00000533079 H0YC42 278 aa11.12□□□□□ -0.63
CAPN1-223ENST00000533079 SNX3O60493 162 aa11.12□□□□□ -0.63
CAPN1-223ENST00000533079 PLIN3O60664 434 aa11.12□□□□□ -0.63
CAPN1-223ENST00000533079 ERAL1O75616 437 aaKnown RBP11.12□□□□□ -0.63
CAPN1-223ENST00000533079 AQP8O94778 261 aa11.12□□□□□ -0.63
CAPN1-223ENST00000533079 TGDSO95455 350 aa11.12□□□□□ -0.63
CAPN1-223ENST00000533079 C2P06681 752 aa11.12□□□□□ -0.63
CAPN1-223ENST00000533079 KLK1P06870 262 aa11.12□□□□□ -0.63
CAPN1-223ENST00000533079 BPGMP07738 259 aa11.12□□□□□ -0.63
CAPN1-223ENST00000533079 CD3EP07766 207 aa11.12□□□□□ -0.63
CAPN1-223ENST00000533079 CT45A8P0DMV1 189 aa11.12□□□□□ -0.63
CAPN1-223ENST00000533079 CT45A9P0DMV2 189 aa11.12□□□□□ -0.63
CAPN1-223ENST00000533079 TCEA1P23193 301 aaKnown RBP11.12□□□□□ -0.63
CAPN1-223ENST00000533079 ALDH18A1P54886 795 aaKnown RBP11.12□□□□□ -0.63
CAPN1-223ENST00000533079 CASP9P55211 416 aa11.12□□□□□ -0.63
CAPN1-223ENST00000533079 TPD52P55327 224 aaPredicted RBP11.12□□□□□ -0.63
CAPN1-223ENST00000533079 CLDN20P56880 219 aa11.12□□□□□ -0.63
CAPN1-223ENST00000533079 LOXL1Q08397 574 aaPredicted RBP11.12□□□□□ -0.63
CAPN1-223ENST00000533079 SGCBQ16585 318 aa11.12□□□□□ -0.63
CAPN1-223ENST00000533079 TMEM249Q2WGJ8 235 aa11.12□□□□□ -0.63
CAPN1-223ENST00000533079 CT45A2Q5DJT8 189 aa11.12□□□□□ -0.63
CAPN1-223ENST00000533079 NCMAPQ5T1S8 102 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms