RNA–Protein interactions for RNA: ENST00000531857.1

PKP3-208, Transcript of plakophilin 3, humanhuman

TSL 4

Gene PKP3, Length 687 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-208ENST00000531857 ATRQ13535 2644 aa15.59■□□□□ 0.09
PKP3-208ENST00000531857 STX16-NPEPL1H3BU86 382 aa15.59■□□□□ 0.09
PKP3-208ENST00000531857 STX16O14662 325 aa15.59■□□□□ 0.09
PKP3-208ENST00000531857 EMC8O43402 210 aa15.59■□□□□ 0.09
PKP3-208ENST00000531857 SCO2O43819 266 aa15.59■□□□□ 0.09
PKP3-208ENST00000531857 TGDSO95455 350 aa15.59■□□□□ 0.09
PKP3-208ENST00000531857 COL6A2P12110 1019 aa15.59■□□□□ 0.09
PKP3-208ENST00000531857 TSPAN8P19075 237 aa15.59■□□□□ 0.09
PKP3-208ENST00000531857 IL12BP29460 328 aa15.59■□□□□ 0.09
PKP3-208ENST00000531857 PNLIPRP2P54317 469 aa15.59■□□□□ 0.09
PKP3-208ENST00000531857 DSCR4P56555 118 aaPredicted RBP15.59■□□□□ 0.09
PKP3-208ENST00000531857 CCDC153Q494R4 210 aa15.59■□□□□ 0.09
PKP3-208ENST00000531857 C6orf89Q6UWU4 347 aa15.59■□□□□ 0.09
PKP3-208ENST00000531857 CCDC121Q6ZUS5 278 aa15.59■□□□□ 0.09
PKP3-208ENST00000531857 FADS6Q8N9I5 356 aa15.59■□□□□ 0.09
PKP3-208ENST00000531857 SPATA3Q8NHX4 192 aa15.59■□□□□ 0.09
PKP3-208ENST00000531857 FNDC9Q8TBE3 224 aa15.59■□□□□ 0.09
PKP3-208ENST00000531857 SELENOMQ8WWX9 145 aa15.59■□□□□ 0.09
PKP3-208ENST00000531857 PAIP2Q9BPZ3 127 aaKnown RBP15.59■□□□□ 0.09
PKP3-208ENST00000531857 REPIN1Q9BWE0 567 aaKnown RBP15.59■□□□□ 0.09
PKP3-208ENST00000531857 FAIM2Q9BWQ8 316 aa15.59■□□□□ 0.09
PKP3-208ENST00000531857 RNF122Q9H9V4 155 aa15.59■□□□□ 0.09
PKP3-208ENST00000531857 FOLH1BQ9HBA9 442 aa15.59■□□□□ 0.09
PKP3-208ENST00000531857 PFDN4Q9NQP4 134 aa15.59■□□□□ 0.09
PKP3-208ENST00000531857 PPP4R1LQ9P1A2 415 aa15.59■□□□□ 0.09
PKP3-208ENST00000531857 CR1P17927 2039 aa15.59■□□□□ 0.09
PKP3-208ENST00000531857 SEC14L5O43304 696 aa15.58■□□□□ 0.08
PKP3-208ENST00000531857 TNFRSF21O75509 655 aa15.58■□□□□ 0.08
PKP3-208ENST00000531857 BCAS2O75934 225 aaPredicted RBP15.58■□□□□ 0.08
PKP3-208ENST00000531857 THBDP07204 575 aa15.58■□□□□ 0.08
PKP3-208ENST00000531857 TROVE2P10155 538 aaKnown RBP eCLIP15.58■□□□□ 0.085e-10■■■□□ 18
PKP3-208ENST00000531857 CD8BP10966 210 aa15.58■□□□□ 0.08
PKP3-208ENST00000531857 HK1P19367 917 aa15.58■□□□□ 0.08
PKP3-208ENST00000531857 KRT20P35900 424 aa15.58■□□□□ 0.08
PKP3-208ENST00000531857 ETV4P43268 484 aa15.58■□□□□ 0.08
PKP3-208ENST00000531857 PRKAA2P54646 552 aa15.58■□□□□ 0.08
PKP3-208ENST00000531857 CDH13P55290 713 aa15.58■□□□□ 0.08
PKP3-208ENST00000531857 CLDN20P56880 219 aa15.58■□□□□ 0.08
PKP3-208ENST00000531857 TRA2BP62995 288 aaKnown RBP15.58■□□□□ 0.08
PKP3-208ENST00000531857 RAET1LQ5VY80 246 aa15.58■□□□□ 0.08
PKP3-208ENST00000531857 PLEKHM3Q6ZWE6 761 aa15.58■□□□□ 0.08
PKP3-208ENST00000531857 SPATA21Q7Z572 469 aa15.58■□□□□ 0.08
PKP3-208ENST00000531857 SLC44A2Q8IWA5 706 aaPredicted RBP15.58■□□□□ 0.08
PKP3-208ENST00000531857 MEIOBQ8N635 442 aa15.58■□□□□ 0.08
PKP3-208ENST00000531857 OR2M3Q8NG83 312 aa15.58■□□□□ 0.08
PKP3-208ENST00000531857 ZNF75CPQ92670 426 aaPredicted RBP15.58■□□□□ 0.08
PKP3-208ENST00000531857 DTNBP1Q96EV8 351 aa15.58■□□□□ 0.08
PKP3-208ENST00000531857 SIKE1Q9BRV8 207 aa15.58■□□□□ 0.08
PKP3-208ENST00000531857 RTN4RQ9BZR6 473 aa15.58■□□□□ 0.08
PKP3-208ENST00000531857 KLHL4Q9C0H6 718 aa15.58■□□□□ 0.08
PKP3-208ENST00000531857 MANSC1Q9H8J5 431 aa15.58■□□□□ 0.08
PKP3-208ENST00000531857 BRF2Q9HAW0 419 aa15.58■□□□□ 0.08
PKP3-208ENST00000531857 FLRT3Q9NZU0 649 aa15.58■□□□□ 0.08
PKP3-208ENST00000531857 MED11Q9P086 117 aa15.58■□□□□ 0.08
PKP3-208ENST00000531857 XPR1Q9UBH6 696 aa15.58■□□□□ 0.08
PKP3-208ENST00000531857 ZNF225Q9UK10 706 aa15.58■□□□□ 0.08
PKP3-208ENST00000531857 KLF4O43474 513 aa15.57■□□□□ 0.08
PKP3-208ENST00000531857 SNUPNO95149 360 aaKnown RBP15.57■□□□□ 0.08
PKP3-208ENST00000531857 ESRRBO95718 433 aa15.57■□□□□ 0.08
PKP3-208ENST00000531857 IL3P08700 152 aa15.57■□□□□ 0.08
PKP3-208ENST00000531857 RPS17P08708 135 aaKnown RBP15.57■□□□□ 0.08
PKP3-208ENST00000531857 RBP1P09455 135 aa15.57■□□□□ 0.08
PKP3-208ENST00000531857 NEFHP12036 1026 aa15.57■□□□□ 0.08
PKP3-208ENST00000531857 EVI2BP34910 448 aa15.57■□□□□ 0.08
PKP3-208ENST00000531857 MAGEA12P43365 314 aa15.57■□□□□ 0.08
PKP3-208ENST00000531857 CAPRIN1Q14444 709 aaKnown RBP15.57■□□□□ 0.08
PKP3-208ENST00000531857 PON3Q15166 354 aa15.57■□□□□ 0.08
PKP3-208ENST00000531857 GUSBP1Q15486 140 aa15.57■□□□□ 0.08
PKP3-208ENST00000531857 SPDYAQ5MJ70 313 aa15.57■□□□□ 0.08
PKP3-208ENST00000531857 TCHHL1Q5QJ38 904 aaPredicted RBP15.57■□□□□ 0.08
PKP3-208ENST00000531857 OR7G2Q8NG99 324 aa15.57■□□□□ 0.08
PKP3-208ENST00000531857 ZNF483Q8TF39 744 aaPredicted RBP15.57■□□□□ 0.08
PKP3-208ENST00000531857 EXOSC8Q96B26 276 aaKnown RBP15.57■□□□□ 0.08
PKP3-208ENST00000531857 ELAC2Q9BQ52 826 aaKnown RBP15.57■□□□□ 0.08
PKP3-208ENST00000531857 SNX6Q9UNH7 406 aa15.57■□□□□ 0.08
PKP3-208ENST00000531857 SONP18583 2426 aaKnown RBP15.57■□□□□ 0.08
PKP3-208ENST00000531857 MXRA5Q9NR99 2828 aa15.57■□□□□ 0.08
PKP3-208ENST00000531857 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP15.56■□□□□ 0.08
PKP3-208ENST00000531857 OR2M5A3KFT3 312 aa15.56■□□□□ 0.08
PKP3-208ENST00000531857 H3BML4 177 aa15.56■□□□□ 0.08
PKP3-208ENST00000531857 FADS1O60427 444 aa15.56■□□□□ 0.08
PKP3-208ENST00000531857 EDF1O60869 148 aaKnown RBP15.56■□□□□ 0.08
PKP3-208ENST00000531857 SMIM24O75264 130 aa15.56■□□□□ 0.08
PKP3-208ENST00000531857 AQP8O94778 261 aa15.56■□□□□ 0.08
PKP3-208ENST00000531857 OR4F21O95013 312 aa15.56■□□□□ 0.08
PKP3-208ENST00000531857 OTCP00480 354 aa15.56■□□□□ 0.08
PKP3-208ENST00000531857 PLAUP00749 431 aa15.56■□□□□ 0.08
PKP3-208ENST00000531857 NID1P14543 1247 aa15.56■□□□□ 0.08
PKP3-208ENST00000531857 TBXA2RP21731 343 aa15.56■□□□□ 0.08
PKP3-208ENST00000531857 SERPINB4P48594 390 aa15.56■□□□□ 0.08
PKP3-208ENST00000531857 EEFSECP57772 596 aaKnown RBP15.56■□□□□ 0.08
PKP3-208ENST00000531857 RAE1P78406 368 aaKnown RBP15.56■□□□□ 0.08
PKP3-208ENST00000531857 PSG6Q00889 435 aa15.56■□□□□ 0.08
PKP3-208ENST00000531857 KRTAP1-1Q07627 177 aa15.56■□□□□ 0.08
PKP3-208ENST00000531857 STX5Q13190 355 aa15.56■□□□□ 0.08
PKP3-208ENST00000531857 EXOC3L2Q2M3D2 409 aa15.56■□□□□ 0.08
PKP3-208ENST00000531857 ERP27Q96DN0 273 aa15.56■□□□□ 0.08
PKP3-208ENST00000531857 VPS29Q9UBQ0 182 aa15.56■□□□□ 0.08
PKP3-208ENST00000531857 TMCO1Q9UM00 188 aa15.56■□□□□ 0.08
PKP3-208ENST00000531857 PROCRQ9UNN8 238 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms