RNA–Protein interactions for RNA: ENST00000531007.1

CTNND1-228, Transcript of catenin delta 1, humanhuman

TSL 4

Gene CTNND1, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-228ENST00000531007 LRRC42Q9Y546 428 aa9.13□□□□□ -0.95
CTNND1-228ENST00000531007 KCNE3Q9Y6H6 103 aa9.13□□□□□ -0.95
CTNND1-228ENST00000531007 SEC16AO15027 2179 aa9.12□□□□□ -0.95
CTNND1-228ENST00000531007 C9orf172C9J069 976 aa9.12□□□□□ -0.95
CTNND1-228ENST00000531007 G3V2T6 193 aa9.12□□□□□ -0.95
CTNND1-228ENST00000531007 STMND1H3BQB6 276 aa9.12□□□□□ -0.95
CTNND1-228ENST00000531007 TPST1O60507 370 aa9.12□□□□□ -0.95
CTNND1-228ENST00000531007 FMO6PO60774 539 aa9.12□□□□□ -0.95
CTNND1-228ENST00000531007 KLF7O75840 302 aaPredicted RBP9.12□□□□□ -0.95
CTNND1-228ENST00000531007 ZFAND5O76080 213 aa9.12□□□□□ -0.95
CTNND1-228ENST00000531007 IL33O95760 270 aa9.12□□□□□ -0.95
CTNND1-228ENST00000531007 HPRP00739 348 aa9.12□□□□□ -0.95
CTNND1-228ENST00000531007 NGFRP08138 427 aa9.12□□□□□ -0.95
CTNND1-228ENST00000531007 NID1P14543 1247 aa9.12□□□□□ -0.95
CTNND1-228ENST00000531007 PEX2P28328 305 aa9.12□□□□□ -0.95
CTNND1-228ENST00000531007 DNAJA1P31689 397 aaKnown RBP9.12□□□□□ -0.95
CTNND1-228ENST00000531007 KRT20P35900 424 aa9.12□□□□□ -0.95
CTNND1-228ENST00000531007 ADH7P40394 386 aa9.12□□□□□ -0.95
CTNND1-228ENST00000531007 ETV5P41161 510 aa9.12□□□□□ -0.95
CTNND1-228ENST00000531007 HMGA2P52926 109 aa9.12□□□□□ -0.95
CTNND1-228ENST00000531007 TNP2Q05952 138 aa9.12□□□□□ -0.95
CTNND1-228ENST00000531007 EBPQ15125 230 aaKnown RBP9.12□□□□□ -0.95
CTNND1-228ENST00000531007 ZNF141Q15928 474 aa9.12□□□□□ -0.95
CTNND1-228ENST00000531007 DUSP7Q16829 419 aa9.12□□□□□ -0.95
CTNND1-228ENST00000531007 RFX4Q33E94 735 aa9.12□□□□□ -0.95
CTNND1-228ENST00000531007 GRAMD1BQ3KR37 738 aa9.12□□□□□ -0.95
CTNND1-228ENST00000531007 FLYWCH1Q4VC44 716 aa9.12□□□□□ -0.95
CTNND1-228ENST00000531007 CMPK2Q5EBM0 449 aa9.12□□□□□ -0.95
CTNND1-228ENST00000531007 RPS26P11Q5JNZ5 115 aaPredicted RBP9.12□□□□□ -0.95
CTNND1-228ENST00000531007 HMBOX1Q6NT76 420 aa9.12□□□□□ -0.95
CTNND1-228ENST00000531007 SHQ1Q6PI26 577 aaKnown RBP9.12□□□□□ -0.95
CTNND1-228ENST00000531007 PAPD4Q6PIY7 484 aaKnown RBP9.12□□□□□ -0.95
CTNND1-228ENST00000531007 ZBTB49Q6ZSB9 765 aa9.12□□□□□ -0.95
CTNND1-228ENST00000531007 VTCN1Q7Z7D3 282 aa9.12□□□□□ -0.95
CTNND1-228ENST00000531007 GRAMD2AQ8IUY3 354 aa9.12□□□□□ -0.95
CTNND1-228ENST00000531007 DND1Q8IYX4 353 aaKnown RBP9.12□□□□□ -0.95
CTNND1-228ENST00000531007 NLGN4XQ8N0W4 816 aa9.12□□□□□ -0.95
CTNND1-228ENST00000531007 TAGAPQ8N103 731 aa9.12□□□□□ -0.95
CTNND1-228ENST00000531007 SHISA5Q8N114 240 aa9.12□□□□□ -0.95
CTNND1-228ENST00000531007 SLC15A4Q8N697 577 aa9.12□□□□□ -0.95
CTNND1-228ENST00000531007 FAM86B1Q8N7N1 296 aa9.12□□□□□ -0.95
CTNND1-228ENST00000531007 PIK3C3Q8NEB9 887 aa9.12□□□□□ -0.95
CTNND1-228ENST00000531007 NFAM1Q8NET5 270 aaPredicted RBP9.12□□□□□ -0.95
CTNND1-228ENST00000531007 NLGN4YQ8NFZ3 816 aaPredicted RBP9.12□□□□□ -0.95
CTNND1-228ENST00000531007 M1APQ8TC57 530 aa9.12□□□□□ -0.95
CTNND1-228ENST00000531007 APOBEC4Q8WW27 367 aaKnown RBP9.12□□□□□ -0.95
CTNND1-228ENST00000531007 NRG4Q8WWG1 115 aa9.12□□□□□ -0.95
CTNND1-228ENST00000531007 DNAJC9Q8WXX5 260 aa9.12□□□□□ -0.95
CTNND1-228ENST00000531007 RBM4BQ9BQ04 359 aaKnown RBP9.12□□□□□ -0.95
CTNND1-228ENST00000531007 RBM4Q9BWF3 364 aaKnown RBP9.12□□□□□ -0.95
CTNND1-228ENST00000531007 WWTR1Q9GZV5 400 aa9.12□□□□□ -0.95
CTNND1-228ENST00000531007 ANKRD19PQ9H560 264 aa9.12□□□□□ -0.95
CTNND1-228ENST00000531007 UBQLN4Q9NRR5 601 aa9.12□□□□□ -0.95
CTNND1-228ENST00000531007 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.12□□□□□ -0.95
CTNND1-228ENST00000531007 NDUFAF4Q9P032 175 aa9.12□□□□□ -0.95
CTNND1-228ENST00000531007 FARSAQ9Y285 508 aaKnown RBP9.12□□□□□ -0.95
CTNND1-228ENST00000531007 SH3GLB1Q9Y371 365 aa9.12□□□□□ -0.95
CTNND1-228ENST00000531007 PTRH2Q9Y3E5 179 aaKnown RBP9.12□□□□□ -0.95
CTNND1-228ENST00000531007 DTNAQ9Y4J8 743 aa9.12□□□□□ -0.95
CTNND1-228ENST00000531007 PCDHGA6Q9Y5G7 932 aa9.12□□□□□ -0.95
CTNND1-228ENST00000531007 V9GYQ6 96 aa9.12□□□□□ -0.95
CTNND1-228ENST00000531007 PCNX2A6NKB5 2137 aa9.11□□□□□ -0.95
CTNND1-228ENST00000531007 MYOCOSA0A1B0GUC4 107 aa9.11□□□□□ -0.95
CTNND1-228ENST00000531007 ARRDC5A6NEK1 342 aa9.11□□□□□ -0.95
CTNND1-228ENST00000531007 OR2W5A6NFC9 320 aa9.11□□□□□ -0.95
CTNND1-228ENST00000531007 H3BNH8 94 aa9.11□□□□□ -0.95
CTNND1-228ENST00000531007 HRKO00198 91 aa9.11□□□□□ -0.95
CTNND1-228ENST00000531007 HS6ST1O60243 411 aa9.11□□□□□ -0.95
CTNND1-228ENST00000531007 FCMRO60667 390 aa9.11□□□□□ -0.95
CTNND1-228ENST00000531007 CNOT3O75175 753 aaKnown RBP9.11□□□□□ -0.95
CTNND1-228ENST00000531007 E2F6O75461 281 aa9.11□□□□□ -0.95
CTNND1-228ENST00000531007 TNFSF15O95150 251 aa9.11□□□□□ -0.95
CTNND1-228ENST00000531007 RASAL1O95294 804 aa9.11□□□□□ -0.95
CTNND1-228ENST00000531007 OPN1SWP03999 348 aa9.11□□□□□ -0.95
CTNND1-228ENST00000531007 THRBP10828 461 aa9.11□□□□□ -0.95
CTNND1-228ENST00000531007 ACADSP16219 412 aa9.11□□□□□ -0.95
CTNND1-228ENST00000531007 ZNF23P17027 643 aa9.11□□□□□ -0.95
CTNND1-228ENST00000531007 ZNF26P17031 533 aaPredicted RBP9.11□□□□□ -0.95
CTNND1-228ENST00000531007 TCN2P20062 427 aa9.11□□□□□ -0.95
CTNND1-228ENST00000531007 FPR1P21462 350 aa9.11□□□□□ -0.95
CTNND1-228ENST00000531007 RBMS1P29558 406 aaKnown RBP9.11□□□□□ -0.95
CTNND1-228ENST00000531007 TMED10P49755 219 aaKnown RBP9.11□□□□□ -0.95
CTNND1-228ENST00000531007 NOVA1P51513 510 aaKnown RBP9.11□□□□□ -0.95
CTNND1-228ENST00000531007 PNLIPRP2P54317 469 aa9.11□□□□□ -0.95
CTNND1-228ENST00000531007 ATP12AP54707 1039 aa9.11□□□□□ -0.95
CTNND1-228ENST00000531007 SLC26A5P58743 744 aa9.11□□□□□ -0.95
CTNND1-228ENST00000531007 VLDLRP98155 873 aa9.11□□□□□ -0.95
CTNND1-228ENST00000531007 TARDBPQ13148 414 aaKnown RBP eCLIP9.11□□□□□ -0.95
CTNND1-228ENST00000531007 EFR3AQ14156 821 aa9.11□□□□□ -0.95
CTNND1-228ENST00000531007 NRF1Q16656 503 aa9.11□□□□□ -0.95
CTNND1-228ENST00000531007 IQCCQ4KMZ1 466 aa9.11□□□□□ -0.95
CTNND1-228ENST00000531007 C3orf38Q5JPI3 329 aa9.11□□□□□ -0.95
CTNND1-228ENST00000531007 LPCAT4Q643R3 524 aa9.11□□□□□ -0.95
CTNND1-228ENST00000531007 PLAG1Q6DJT9 500 aa9.11□□□□□ -0.95
CTNND1-228ENST00000531007 NPSR1Q6W5P4 371 aa9.11□□□□□ -0.95
CTNND1-228ENST00000531007 LANCL3Q6ZV70 420 aa9.11□□□□□ -0.95
CTNND1-228ENST00000531007 NDUFAF7Q7L592 441 aa9.11□□□□□ -0.95
CTNND1-228ENST00000531007 TMPRSS7Q7RTY8 843 aa9.11□□□□□ -0.95
CTNND1-228ENST00000531007 ZNF550Q7Z398 422 aa9.11□□□□□ -0.95
CTNND1-228ENST00000531007 AMIGO2Q86SJ2 522 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms