RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 KIAA1324Q6UXG2 1013 aaKnown RBP16.04■□□□□ 0.16
BRCA2-204ENST00000530893 CCBE1Q6UXH8 406 aaPredicted RBP16.04■□□□□ 0.16
BRCA2-204ENST00000530893 GDPD3Q7L5L3 318 aa16.04■□□□□ 0.16
BRCA2-204ENST00000530893 MEX3DQ86XN8 651 aaKnown RBP16.04■□□□□ 0.16
BRCA2-204ENST00000530893 PSD4Q8NDX1 1056 aa16.04■□□□□ 0.16
BRCA2-204ENST00000530893 OR10G6Q8NH81 332 aa16.04■□□□□ 0.16
BRCA2-204ENST00000530893 BAHD1Q8TBE0 780 aaPredicted RBP16.04■□□□□ 0.16
BRCA2-204ENST00000530893 GPR151Q8TDV0 419 aa16.04■□□□□ 0.16
BRCA2-204ENST00000530893 GATAD2BQ8WXI9 593 aa16.04■□□□□ 0.16
BRCA2-204ENST00000530893 SLC7A7Q9UM01 511 aa16.04■□□□□ 0.16
BRCA2-204ENST00000530893 CAB39Q9Y376 341 aaPredicted RBP16.04■□□□□ 0.16
BRCA2-204ENST00000530893 PLD2O14939 933 aa16.03■□□□□ 0.16
BRCA2-204ENST00000530893 IGHA1P01876 353 aa16.03■□□□□ 0.16
BRCA2-204ENST00000530893 NID1P14543 1247 aa16.03■□□□□ 0.16
BRCA2-204ENST00000530893 SOX18P35713 384 aa16.03■□□□□ 0.16
BRCA2-204ENST00000530893 GPR4P46093 362 aa16.03■□□□□ 0.16
BRCA2-204ENST00000530893 TMED10P49755 219 aaKnown RBP16.03■□□□□ 0.16
BRCA2-204ENST00000530893 TPMTP51580 245 aa16.03■□□□□ 0.16
BRCA2-204ENST00000530893 SNRPNP63162 240 aaKnown RBP16.03■□□□□ 0.16
BRCA2-204ENST00000530893 CD300CQ08708 224 aa16.03■□□□□ 0.16
BRCA2-204ENST00000530893 TCEA2Q15560 299 aa16.03■□□□□ 0.16
BRCA2-204ENST00000530893 RAB30Q15771 203 aa16.03■□□□□ 0.16
BRCA2-204ENST00000530893 TRMT12Q53H54 448 aaKnown RBP16.03■□□□□ 0.16
BRCA2-204ENST00000530893 DCST2Q5T1A1 773 aa16.03■□□□□ 0.16
BRCA2-204ENST00000530893 C22orf42Q6IC83 251 aa16.03■□□□□ 0.16
BRCA2-204ENST00000530893 RNF44Q7L0R7 432 aa16.03■□□□□ 0.16
BRCA2-204ENST00000530893 OR4N5Q8IXE1 308 aa16.03■□□□□ 0.16
BRCA2-204ENST00000530893 BRIX1Q8TDN6 353 aaKnown RBP16.03■□□□□ 0.16
BRCA2-204ENST00000530893 C1GALT1C1Q96EU7 318 aa16.03■□□□□ 0.16
BRCA2-204ENST00000530893 MCOLN1Q9GZU1 580 aa16.03■□□□□ 0.16
BRCA2-204ENST00000530893 KLHL25Q9H0H3 589 aa16.03■□□□□ 0.16
BRCA2-204ENST00000530893 IL21RQ9HBE5 538 aa16.03■□□□□ 0.16
BRCA2-204ENST00000530893 TRPV5Q9NQA5 729 aa16.03■□□□□ 0.16
BRCA2-204ENST00000530893 POLE3Q9NRF9 147 aa16.03■□□□□ 0.16
BRCA2-204ENST00000530893 ERVK13-1Q9NX77 482 aa16.03■□□□□ 0.16
BRCA2-204ENST00000530893 FBXL21Q9UKT6 434 aa16.03■□□□□ 0.16
BRCA2-204ENST00000530893 FANCMQ8IYD8 2048 aa16.03■□□□□ 0.16
BRCA2-204ENST00000530893 LOC105369274A0A096LPK9 316 aa16.02■□□□□ 0.16
BRCA2-204ENST00000530893 LOC102723532A0A0G2JNH3 316 aa16.02■□□□□ 0.16
BRCA2-204ENST00000530893 OR5K4A6NMS3 321 aa16.02■□□□□ 0.16
BRCA2-204ENST00000530893 H0YGG7 62 aa16.02■□□□□ 0.16
BRCA2-204ENST00000530893 AKAP8O43823 692 aaKnown RBP16.02■□□□□ 0.16
BRCA2-204ENST00000530893 GPR75O95800 540 aa16.02■□□□□ 0.16
BRCA2-204ENST00000530893 MSL3P1P0C860 447 aa16.02■□□□□ 0.16
BRCA2-204ENST00000530893 ARF3P61204 181 aaPredicted RBP16.02■□□□□ 0.16
BRCA2-204ENST00000530893 EOGTQ5NDL2 527 aa16.02■□□□□ 0.16
BRCA2-204ENST00000530893 RPL13AP3Q6NVV1 102 aa16.02■□□□□ 0.16
BRCA2-204ENST00000530893 AKAP14Q86UN6 197 aa16.02■□□□□ 0.16
BRCA2-204ENST00000530893 GID4Q8IVV7 300 aa16.02■□□□□ 0.16
BRCA2-204ENST00000530893 OR4N4Q8N0Y3 316 aa16.02■□□□□ 0.16
BRCA2-204ENST00000530893 FAM181AQ8N9Y4 354 aa16.02■□□□□ 0.16
BRCA2-204ENST00000530893 OR52N1Q8NH53 320 aa16.02■□□□□ 0.16
BRCA2-204ENST00000530893 FAM3CQ92520 227 aa16.02■□□□□ 0.16
BRCA2-204ENST00000530893 FN3KQ9H479 309 aa16.02■□□□□ 0.16
BRCA2-204ENST00000530893 H2AFY2Q9P0M6 372 aaPredicted RBP16.02■□□□□ 0.16
BRCA2-204ENST00000530893 PCDHGB2Q9Y5G2 931 aa16.02■□□□□ 0.16
BRCA2-204ENST00000530893 LRP4O75096 1905 aa16.02■□□□□ 0.16
BRCA2-204ENST00000530893 TRDV1A0A1B0GX56 115 aa16.02■□□□□ 0.15
BRCA2-204ENST00000530893 GPR68Q15743 365 aa16.02■□□□□ 0.15
BRCA2-204ENST00000530893 CRTC2Q53ET0 693 aaPredicted RBP16.02■□□□□ 0.15
BRCA2-204ENST00000530893 LAX1Q8IWV1 398 aa16.02■□□□□ 0.15
BRCA2-204ENST00000530893 OR8H2Q8N162 312 aa16.02■□□□□ 0.15
BRCA2-204ENST00000530893 KLHL36Q8N4N3 616 aa16.02■□□□□ 0.15
BRCA2-204ENST00000530893 GPBAR1Q8TDU6 330 aa16.02■□□□□ 0.15
BRCA2-204ENST00000530893 PRSS27Q9BQR3 290 aa16.02■□□□□ 0.15
BRCA2-204ENST00000530893 TPK1Q9H3S4 243 aa16.02■□□□□ 0.15
BRCA2-204ENST00000530893 NPAP1Q9NZP6 1156 aa16.02■□□□□ 0.15
BRCA2-204ENST00000530893 CPNE7Q9UBL6 633 aa16.02■□□□□ 0.15
BRCA2-204ENST00000530893 NTNG1Q9Y2I2 539 aa16.02■□□□□ 0.15
BRCA2-204ENST00000530893 F5P12259 2224 aa16.02■□□□□ 0.15
BRCA2-204ENST00000530893 KIR2DS5A0A0G2JLQ3 304 aa16.01■□□□□ 0.15
BRCA2-204ENST00000530893 A0A0G2JNG1 304 aa16.01■□□□□ 0.15
BRCA2-204ENST00000530893 A0A0J9YY10 115 aa16.01■□□□□ 0.15
BRCA2-204ENST00000530893 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.01■□□□□ 0.15
BRCA2-204ENST00000530893 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.01■□□□□ 0.15
BRCA2-204ENST00000530893 CDHR4A6H8M9 788 aa16.01■□□□□ 0.15
BRCA2-204ENST00000530893 KIR2DS3K7RE56 304 aa16.01■□□□□ 0.15
BRCA2-204ENST00000530893 RFXAPO00287 272 aa16.01■□□□□ 0.15
BRCA2-204ENST00000530893 CYR61O00622 381 aa16.01■□□□□ 0.15
BRCA2-204ENST00000530893 TNFP01375 233 aa16.01■□□□□ 0.15
BRCA2-204ENST00000530893 GALP22466 123 aa16.01■□□□□ 0.15
BRCA2-204ENST00000530893 MAP3K8P41279 467 aa16.01■□□□□ 0.15
BRCA2-204ENST00000530893 RABIFP47224 123 aa16.01■□□□□ 0.15
BRCA2-204ENST00000530893 GCGRP47871 477 aa16.01■□□□□ 0.15
BRCA2-204ENST00000530893 RPS25P62851 125 aaKnown RBP16.01■□□□□ 0.15
BRCA2-204ENST00000530893 HNRNPA0Q13151 305 aaKnown RBP16.01■□□□□ 0.15
BRCA2-204ENST00000530893 KIR2DS5Q14953 304 aa16.01■□□□□ 0.15
BRCA2-204ENST00000530893 DDI2Q5TDH0 399 aa16.01■□□□□ 0.15
BRCA2-204ENST00000530893 COX18Q8N8Q8 333 aa16.01■□□□□ 0.15
BRCA2-204ENST00000530893 SIMC1Q8NDZ2 872 aa16.01■□□□□ 0.15
BRCA2-204ENST00000530893 TMEM203Q969S6 136 aa16.01■□□□□ 0.15
BRCA2-204ENST00000530893 KIAA1143Q96AT1 154 aaPredicted RBP16.01■□□□□ 0.15
BRCA2-204ENST00000530893 GSDMCQ9BYG8 508 aa16.01■□□□□ 0.15
BRCA2-204ENST00000530893 SRRQ9GZT4 340 aa16.01■□□□□ 0.15
BRCA2-204ENST00000530893 C8orf33Q9H7E9 229 aaPredicted RBP16.01■□□□□ 0.15
BRCA2-204ENST00000530893 ADAP2Q9NPF8 381 aa16.01■□□□□ 0.15
BRCA2-204ENST00000530893 C14orf105Q9NVL8 296 aa16.01■□□□□ 0.15
BRCA2-204ENST00000530893 PLEKHB1Q9UF11 243 aaPredicted RBP16.01■□□□□ 0.15
BRCA2-204ENST00000530893 CBLCQ9ULV8 474 aa16.01■□□□□ 0.15
BRCA2-204ENST00000530893 PIAS3Q9Y6X2 628 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms