RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 MT-ND4P03905 459 aa7.63□□□□□ -1.19
CSDE1-214ENST00000530886 NOS3P29474 1203 aa7.63□□□□□ -1.19
CSDE1-214ENST00000530886 MNDAP41218 407 aa7.63□□□□□ -1.19
CSDE1-214ENST00000530886 CD86P42081 329 aa7.63□□□□□ -1.19
CSDE1-214ENST00000530886 RBP2P50120 134 aa7.63□□□□□ -1.19
CSDE1-214ENST00000530886 RNF144AP50876 292 aaPredicted RBP7.63□□□□□ -1.19
CSDE1-214ENST00000530886 CD81P60033 236 aa7.63□□□□□ -1.19
CSDE1-214ENST00000530886 PEA15Q15121 130 aa7.63□□□□□ -1.19
CSDE1-214ENST00000530886 FAM98CQ17RN3 349 aaKnown RBP7.63□□□□□ -1.19
CSDE1-214ENST00000530886 ZSWIM7Q19AV6 140 aa7.63□□□□□ -1.19
CSDE1-214ENST00000530886 C18orf21Q32NC0 220 aaPredicted RBP7.63□□□□□ -1.19
CSDE1-214ENST00000530886 CTSL3PQ5NE16 218 aa7.63□□□□□ -1.19
CSDE1-214ENST00000530886 ATPAF1Q5TC12 328 aaPredicted RBP7.63□□□□□ -1.19
CSDE1-214ENST00000530886 SAMD12Q8N8I0 201 aa7.63□□□□□ -1.19
CSDE1-214ENST00000530886 POGLUT1Q8NBL1 392 aa7.63□□□□□ -1.19
CSDE1-214ENST00000530886 B3GALNT2Q8NCR0 500 aa7.63□□□□□ -1.19
CSDE1-214ENST00000530886 OR4F15Q8NGB8 312 aa7.63□□□□□ -1.19
CSDE1-214ENST00000530886 TRIM43Q96BQ3 446 aaPredicted RBP7.63□□□□□ -1.19
CSDE1-214ENST00000530886 SMOQ99835 787 aa7.63□□□□□ -1.19
CSDE1-214ENST00000530886 ZNF649Q9BS31 505 aa7.63□□□□□ -1.19
CSDE1-214ENST00000530886 FUZQ9BT04 418 aa7.63□□□□□ -1.19
CSDE1-214ENST00000530886 GGACTQ9BVM4 153 aa7.63□□□□□ -1.19
CSDE1-214ENST00000530886 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.63□□□□□ -1.199e-6■■□□□ 13.2
CSDE1-214ENST00000530886 LMAN2LQ9H0V9 348 aa7.63□□□□□ -1.19
CSDE1-214ENST00000530886 STARD7Q9NQZ5 370 aa7.63□□□□□ -1.19
CSDE1-214ENST00000530886 FLRT1Q9NZU1 646 aa7.63□□□□□ -1.19
CSDE1-214ENST00000530886 SLC9A8Q9Y2E8 581 aa7.63□□□□□ -1.19
CSDE1-214ENST00000530886 OARD1Q9Y530 152 aa7.63□□□□□ -1.19
CSDE1-214ENST00000530886 MTCL1Q9Y4B5 1905 aaKnown RBP7.63□□□□□ -1.19
CSDE1-214ENST00000530886 A0A0G2JK05 382 aa7.62□□□□□ -1.19
CSDE1-214ENST00000530886 FAAHO00519 579 aa7.62□□□□□ -1.19
CSDE1-214ENST00000530886 FFAR2O15552 330 aa7.62□□□□□ -1.19
CSDE1-214ENST00000530886 FGF16O43320 207 aa7.62□□□□□ -1.19
CSDE1-214ENST00000530886 GJB3O75712 270 aa7.62□□□□□ -1.19
CSDE1-214ENST00000530886 LATS1O95835 1130 aa7.62□□□□□ -1.19
CSDE1-214ENST00000530886 ADH1CP00326 375 aa7.62□□□□□ -1.19
CSDE1-214ENST00000530886 COX5BP10606 129 aa7.62□□□□□ -1.19
CSDE1-214ENST00000530886 VAMP1P23763 118 aa7.62□□□□□ -1.19
CSDE1-214ENST00000530886 HTR2AP28223 471 aa7.62□□□□□ -1.19
CSDE1-214ENST00000530886 ABCD3P28288 659 aa7.62□□□□□ -1.19
CSDE1-214ENST00000530886 ZNF140P52738 457 aaPredicted RBP7.62□□□□□ -1.19
CSDE1-214ENST00000530886 HCCSP53701 268 aa7.62□□□□□ -1.19
CSDE1-214ENST00000530886 PPIAP62937 165 aaKnown RBP7.62□□□□□ -1.19
CSDE1-214ENST00000530886 DGCR2P98153 550 aa7.62□□□□□ -1.19
CSDE1-214ENST00000530886 ILF3Q12906 894 aaKnown RBP eCLIP7.62□□□□□ -1.19
CSDE1-214ENST00000530886 TOMM20Q15388 145 aa7.62□□□□□ -1.19
CSDE1-214ENST00000530886 LY6KQ17RY6 165 aa7.62□□□□□ -1.19
CSDE1-214ENST00000530886 ZNF813Q6ZN06 617 aa7.62□□□□□ -1.19
CSDE1-214ENST00000530886 HDDC3Q8N4P3 179 aa7.62□□□□□ -1.19
CSDE1-214ENST00000530886 TMEM185AQ8NFB2 350 aa7.62□□□□□ -1.19
CSDE1-214ENST00000530886 APOBEC4Q8WW27 367 aaKnown RBP7.62□□□□□ -1.19
CSDE1-214ENST00000530886 MESP1Q9BRJ9 268 aa7.62□□□□□ -1.19
CSDE1-214ENST00000530886 CEP350Q5VT06 3117 aa7.62□□□□□ -1.19
CSDE1-214ENST00000530886 TTC3P53804 2025 aa7.62□□□□□ -1.19
CSDE1-214ENST00000530886 RFXAPO00287 272 aa7.62□□□□□ -1.19
CSDE1-214ENST00000530886 TREHO43280 583 aa7.62□□□□□ -1.19
CSDE1-214ENST00000530886 LRRTM2O43300 516 aa7.62□□□□□ -1.19
CSDE1-214ENST00000530886 RBBP9O75884 186 aa7.62□□□□□ -1.19
CSDE1-214ENST00000530886 CD3GP09693 182 aa7.62□□□□□ -1.19
CSDE1-214ENST00000530886 GNSP15586 552 aa7.62□□□□□ -1.19
CSDE1-214ENST00000530886 EPORP19235 508 aa7.62□□□□□ -1.19
CSDE1-214ENST00000530886 RAB4AP20338 218 aa7.62□□□□□ -1.19
CSDE1-214ENST00000530886 VIPR1P32241 457 aa7.62□□□□□ -1.19
CSDE1-214ENST00000530886 UBE2IP63279 158 aaKnown RBP7.62□□□□□ -1.19
CSDE1-214ENST00000530886 ACY1Q03154 408 aa7.62□□□□□ -1.19
CSDE1-214ENST00000530886 FABP9Q0Z7S8 132 aa7.62□□□□□ -1.19
CSDE1-214ENST00000530886 SFXN4Q6P4A7 337 aa7.62□□□□□ -1.19
CSDE1-214ENST00000530886 ZNF621Q6ZSS3 439 aa7.62□□□□□ -1.19
CSDE1-214ENST00000530886 TMPRSS11FQ6ZWK6 438 aa7.62□□□□□ -1.19
CSDE1-214ENST00000530886 MAMDC2Q7Z304 686 aaPredicted RBP7.62□□□□□ -1.19
CSDE1-214ENST00000530886 SIDT2Q8NBJ9 832 aaKnown RBP7.62□□□□□ -1.19
CSDE1-214ENST00000530886 FBXO15Q8NCQ5 510 aaPredicted RBP7.62□□□□□ -1.19
CSDE1-214ENST00000530886 MALSU1Q96EH3 234 aa7.62□□□□□ -1.19
CSDE1-214ENST00000530886 PPP1R16BQ96T49 567 aa7.62□□□□□ -1.19
CSDE1-214ENST00000530886 RSPO3Q9BXY4 272 aaPredicted RBP7.62□□□□□ -1.19
CSDE1-214ENST00000530886 TEX101Q9BY14 249 aa7.62□□□□□ -1.19
CSDE1-214ENST00000530886 MFRPQ9BY79 579 aa7.62□□□□□ -1.19
CSDE1-214ENST00000530886 ZCCHC2Q9C0B9 1178 aaKnown RBP7.62□□□□□ -1.19
CSDE1-214ENST00000530886 GPATCH2Q9NW75 528 aa7.62□□□□□ -1.19
CSDE1-214ENST00000530886 ELOVL2Q9NXB9 296 aa7.62□□□□□ -1.19
CSDE1-214ENST00000530886 PIKFYVEQ9Y2I7 2098 aa7.62□□□□□ -1.19
CSDE1-214ENST00000530886 KDM4EB2RXH2 506 aaPredicted RBP7.62□□□□□ -1.19
CSDE1-214ENST00000530886 J3KTA2 159 aa7.62□□□□□ -1.19
CSDE1-214ENST00000530886 YY2O15391 372 aa7.62□□□□□ -1.19
CSDE1-214ENST00000530886 PEX10O60683 326 aa7.62□□□□□ -1.19
CSDE1-214ENST00000530886 IGHA1P01876 353 aa7.62□□□□□ -1.19
CSDE1-214ENST00000530886 OR8U8P0C7N1 319 aa7.62□□□□□ -1.19
CSDE1-214ENST00000530886 TACR1P25103 407 aa7.62□□□□□ -1.19
CSDE1-214ENST00000530886 ITGA3P26006 1051 aa7.62□□□□□ -1.19
CSDE1-214ENST00000530886 MVDP53602 400 aa7.62□□□□□ -1.19
CSDE1-214ENST00000530886 PCBP3P57721 371 aaKnown RBP7.62□□□□□ -1.19
CSDE1-214ENST00000530886 CDK5Q00535 292 aa7.62□□□□□ -1.19
CSDE1-214ENST00000530886 RAB33AQ14088 237 aa7.62□□□□□ -1.19
CSDE1-214ENST00000530886 NDUFA9Q16795 377 aa7.62□□□□□ -1.19
CSDE1-214ENST00000530886 PRAMEF18Q5VWM3 479 aa7.62□□□□□ -1.19
CSDE1-214ENST00000530886 TAPT1Q6NXT6 567 aa7.62□□□□□ -1.19
CSDE1-214ENST00000530886 ANGPTL5Q86XS5 388 aa7.62□□□□□ -1.19
CSDE1-214ENST00000530886 SLC30A8Q8IWU4 369 aa7.62□□□□□ -1.19
CSDE1-214ENST00000530886 MEIOBQ8N635 442 aa7.62□□□□□ -1.19
CSDE1-214ENST00000530886 GOT1L1Q8NHS2 421 aaPredicted RBP7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms