RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 OR10H3O60404 316 aa10.82□□□□□ -0.68
USP35-207ENST00000530546 SEMA7AO75326 666 aa10.82□□□□□ -0.68
USP35-207ENST00000530546 IGFBP1P08833 259 aaPredicted RBP10.82□□□□□ -0.68
USP35-207ENST00000530546 PPP2R1BP30154 601 aa10.82□□□□□ -0.68
USP35-207ENST00000530546 MC3RP41968 323 aa10.82□□□□□ -0.68
USP35-207ENST00000530546 STXBP1P61764 594 aaKnown RBP10.82□□□□□ -0.68
USP35-207ENST00000530546 ST3GAL4Q11206 333 aa10.82□□□□□ -0.68
USP35-207ENST00000530546 PIN1Q13526 163 aaPredicted RBP10.82□□□□□ -0.68
USP35-207ENST00000530546 ZNF267Q14586 743 aaPredicted RBP10.82□□□□□ -0.68
USP35-207ENST00000530546 STK11Q15831 433 aa10.82□□□□□ -0.68
USP35-207ENST00000530546 LCN1P1Q5VSP4 162 aa10.82□□□□□ -0.68
USP35-207ENST00000530546 TYW3Q6IPR3 259 aaKnown RBP10.82□□□□□ -0.68
USP35-207ENST00000530546 TCTN3Q6NUS6 607 aa10.82□□□□□ -0.68
USP35-207ENST00000530546 MZT2BQ6NZ67 158 aa10.82□□□□□ -0.68
USP35-207ENST00000530546 USP30Q70CQ3 517 aa10.82□□□□□ -0.68
USP35-207ENST00000530546 VN1R4Q7Z5H5 301 aa10.82□□□□□ -0.68
USP35-207ENST00000530546 ZNF605Q86T29 641 aa10.82□□□□□ -0.68
USP35-207ENST00000530546 OR4N5Q8IXE1 308 aa10.82□□□□□ -0.68
USP35-207ENST00000530546 DENND6BQ8NEG7 585 aa10.82□□□□□ -0.68
USP35-207ENST00000530546 DUSP18Q8NEJ0 188 aa10.82□□□□□ -0.68
USP35-207ENST00000530546 SUN3Q8TAQ9 357 aa10.82□□□□□ -0.68
USP35-207ENST00000530546 UQCC2Q9BRT2 126 aa10.82□□□□□ -0.68
USP35-207ENST00000530546 TAPBPLQ9BX59 468 aa10.82□□□□□ -0.68
USP35-207ENST00000530546 BARHL1Q9BZE3 327 aa10.82□□□□□ -0.68
USP35-207ENST00000530546 TCEAL2Q9H3H9 227 aaPredicted RBP10.82□□□□□ -0.68
USP35-207ENST00000530546 GPR83Q9NYM4 423 aa10.82□□□□□ -0.68
USP35-207ENST00000530546 TAS2R7Q9NYW3 318 aa10.82□□□□□ -0.68
USP35-207ENST00000530546 ZNF860A6NHJ4 632 aa10.82□□□□□ -0.68
USP35-207ENST00000530546 LRRC72A6NJI9 287 aa10.82□□□□□ -0.68
USP35-207ENST00000530546 PVRP15151 417 aa10.82□□□□□ -0.68
USP35-207ENST00000530546 GABRG2P18507 467 aa10.82□□□□□ -0.68
USP35-207ENST00000530546 CSNK2A2P19784 350 aaPredicted RBP10.82□□□□□ -0.68
USP35-207ENST00000530546 RPS19P39019 145 aaKnown RBP10.82□□□□□ -0.68
USP35-207ENST00000530546 BUD31P41223 144 aaPredicted RBP10.82□□□□□ -0.68
USP35-207ENST00000530546 KCNJ5P48544 419 aa10.82□□□□□ -0.68
USP35-207ENST00000530546 COL19A1Q14993 1142 aa10.82□□□□□ -0.68
USP35-207ENST00000530546 SEC23BQ15437 767 aa10.82□□□□□ -0.68
USP35-207ENST00000530546 TSTQ16762 297 aaKnown RBP10.82□□□□□ -0.68
USP35-207ENST00000530546 DEFB134Q4QY38 66 aa10.82□□□□□ -0.68
USP35-207ENST00000530546 SHEQ5VZ18 495 aa10.82□□□□□ -0.68
USP35-207ENST00000530546 MRM1Q6IN84 353 aaKnown RBP10.82□□□□□ -0.68
USP35-207ENST00000530546 PAQR7Q86WK9 346 aa10.82□□□□□ -0.68
USP35-207ENST00000530546 ZNF761Q86XN6 746 aaPredicted RBP10.82□□□□□ -0.68
USP35-207ENST00000530546 TMEFF1Q8IYR6 380 aa10.82□□□□□ -0.68
USP35-207ENST00000530546 OR8H3Q8N146 312 aa10.82□□□□□ -0.68
USP35-207ENST00000530546 ZNF680Q8NEM1 530 aa10.82□□□□□ -0.68
USP35-207ENST00000530546 NLGN4YQ8NFZ3 816 aaPredicted RBP10.82□□□□□ -0.68
USP35-207ENST00000530546 C6orf106Q9H6K1 298 aaPredicted RBP10.82□□□□□ -0.68
USP35-207ENST00000530546 C11orf16Q9NQ32 467 aa10.82□□□□□ -0.68
USP35-207ENST00000530546 ZNF226Q9NYT6 803 aa10.82□□□□□ -0.68
USP35-207ENST00000530546 C2CD4DB7Z1M9 353 aa10.81□□□□□ -0.68
USP35-207ENST00000530546 HCN1O60741 890 aa10.81□□□□□ -0.68
USP35-207ENST00000530546 DNAJB6O75190 326 aa10.81□□□□□ -0.68
USP35-207ENST00000530546 GPX5O75715 221 aa10.81□□□□□ -0.68
USP35-207ENST00000530546 CSF2P04141 144 aa10.81□□□□□ -0.68
USP35-207ENST00000530546 CHRM4P08173 479 aa10.81□□□□□ -0.68
USP35-207ENST00000530546 F3P13726 295 aa10.81□□□□□ -0.68
USP35-207ENST00000530546 ZNF250P15622 560 aa10.81□□□□□ -0.68
USP35-207ENST00000530546 GSTM5P46439 218 aa10.81□□□□□ -0.68
USP35-207ENST00000530546 MAP2K3P46734 347 aa10.81□□□□□ -0.68
USP35-207ENST00000530546 LIMS1P48059 325 aa10.81□□□□□ -0.68
USP35-207ENST00000530546 KHKP50053 298 aa10.81□□□□□ -0.68
USP35-207ENST00000530546 MRPS21P82921 87 aaKnown RBP10.81□□□□□ -0.68
USP35-207ENST00000530546 GPR18Q14330 331 aa10.81□□□□□ -0.68
USP35-207ENST00000530546 PTGES3Q15185 160 aaKnown RBP10.81□□□□□ -0.68
USP35-207ENST00000530546 AANATQ16613 207 aa10.81□□□□□ -0.68
USP35-207ENST00000530546 SLC48A1Q6P1K1 146 aa10.81□□□□□ -0.68
USP35-207ENST00000530546 KLHL17Q6TDP4 642 aa10.81□□□□□ -0.68
USP35-207ENST00000530546 ASPGQ86U10 573 aa10.81□□□□□ -0.68
USP35-207ENST00000530546 LSRQ86X29 649 aaPredicted RBP10.81□□□□□ -0.68
USP35-207ENST00000530546 ADGRG3Q86Y34 549 aa10.81□□□□□ -0.68
USP35-207ENST00000530546 OR13H1Q8NG92 308 aa10.81□□□□□ -0.68
USP35-207ENST00000530546 ZNF354BQ96LW1 612 aa10.81□□□□□ -0.68
USP35-207ENST00000530546 PRR14Q9BWN1 585 aa10.81□□□□□ -0.68
USP35-207ENST00000530546 RACGAP1Q9H0H5 632 aa10.81□□□□□ -0.68
USP35-207ENST00000530546 ZNF304Q9HCX3 659 aa10.81□□□□□ -0.68
USP35-207ENST00000530546 RBFOX1Q9NWB1 397 aaKnown RBP10.81□□□□□ -0.68
USP35-207ENST00000530546 PLA2G10O15496 165 aa10.81□□□□□ -0.68
USP35-207ENST00000530546 APBB3O95704 486 aa10.81□□□□□ -0.68
USP35-207ENST00000530546 LGI1O95970 557 aa10.81□□□□□ -0.68
USP35-207ENST00000530546 HLA-DQB1P01920 261 aa10.81□□□□□ -0.68
USP35-207ENST00000530546 H1F0P07305 194 aaKnown RBP10.81□□□□□ -0.68
USP35-207ENST00000530546 HOXD4P09016 255 aaPredicted RBP10.81□□□□□ -0.68
USP35-207ENST00000530546 IGFBP4P22692 258 aa10.81□□□□□ -0.68
USP35-207ENST00000530546 NDUFS1P28331 727 aa10.81□□□□□ -0.68
USP35-207ENST00000530546 AKT2P31751 481 aa10.81□□□□□ -0.68
USP35-207ENST00000530546 CBX5P45973 191 aa10.81□□□□□ -0.68
USP35-207ENST00000530546 HOXC5Q00444 222 aa10.81□□□□□ -0.68
USP35-207ENST00000530546 ID2Q02363 134 aa10.81□□□□□ -0.68
USP35-207ENST00000530546 KLHL12Q53G59 568 aa10.81□□□□□ -0.68
USP35-207ENST00000530546 DCST1Q5T197 706 aa10.81□□□□□ -0.68
USP35-207ENST00000530546 FBXO42Q6P3S6 717 aa10.81□□□□□ -0.68
USP35-207ENST00000530546 GPAT4Q86UL3 456 aa10.81□□□□□ -0.68
USP35-207ENST00000530546 COMMD7Q86VX2 200 aa10.81□□□□□ -0.68
USP35-207ENST00000530546 TRIM69Q86WT6 500 aa10.81□□□□□ -0.68
USP35-207ENST00000530546 LURAP1LQ8IV03 231 aa10.81□□□□□ -0.68
USP35-207ENST00000530546 SHISA5Q8N114 240 aa10.81□□□□□ -0.68
USP35-207ENST00000530546 SLC44A3Q8N4M1 653 aa10.81□□□□□ -0.68
USP35-207ENST00000530546 CAMKK1Q8N5S9 505 aa10.81□□□□□ -0.68
USP35-207ENST00000530546 SRFBP1Q8NEF9 429 aaKnown RBP10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms