RNA–Protein interactions for RNA: ENST00000530004.5

TTC39A-216, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best) BASIC

Gene TTC39A, Length 1,780 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-216ENST00000530004 USE1Q9NZ43 259 aa13.32□□□□□ -0.28
TTC39A-216ENST00000530004 PDP1Q9P0J1 537 aaPredicted RBP13.32□□□□□ -0.28
TTC39A-216ENST00000530004 PRODH2Q9UF12 536 aa13.32□□□□□ -0.28
TTC39A-216ENST00000530004 SLC9A8Q9Y2E8 581 aa13.32□□□□□ -0.28
TTC39A-216ENST00000530004 LYVE1Q9Y5Y7 322 aa13.32□□□□□ -0.28
TTC39A-216ENST00000530004 NCOR2Q9Y618 2525 aa13.32□□□□□ -0.28
TTC39A-216ENST00000530004 TNFRSF11BO00300 401 aa13.32□□□□□ -0.28
TTC39A-216ENST00000530004 PCDH17O14917 1159 aa13.32□□□□□ -0.28
TTC39A-216ENST00000530004 KCNK2O95069 426 aa13.32□□□□□ -0.28
TTC39A-216ENST00000530004 SNAP29O95721 258 aa13.32□□□□□ -0.28
TTC39A-216ENST00000530004 IGHEP01854 428 aa13.32□□□□□ -0.28
TTC39A-216ENST00000530004 PRKAR1BP31321 381 aa13.32□□□□□ -0.28
TTC39A-216ENST00000530004 RFX3P48380 749 aa13.32□□□□□ -0.28
TTC39A-216ENST00000530004 MERTKQ12866 999 aa13.32□□□□□ -0.28
TTC39A-216ENST00000530004 GANABQ14697 944 aaKnown RBP13.32□□□□□ -0.28
TTC39A-216ENST00000530004 TCTN3Q6NUS6 607 aa13.32□□□□□ -0.28
TTC39A-216ENST00000530004 NPSR1Q6W5P4 371 aa13.32□□□□□ -0.28
TTC39A-216ENST00000530004 DEF8Q6ZN54 512 aa13.32□□□□□ -0.28
TTC39A-216ENST00000530004 ANKRD37Q7Z713 158 aa13.32□□□□□ -0.28
TTC39A-216ENST00000530004 ZNF605Q86T29 641 aa13.32□□□□□ -0.28
TTC39A-216ENST00000530004 OR4N2Q8NGD1 307 aa13.32□□□□□ -0.28
TTC39A-216ENST00000530004 SLC2A12Q8TD20 617 aa13.32□□□□□ -0.28
TTC39A-216ENST00000530004 NACC2Q96BF6 587 aa13.32□□□□□ -0.28
TTC39A-216ENST00000530004 ADI1Q9BV57 179 aa13.32□□□□□ -0.28
TTC39A-216ENST00000530004 ITPAQ9BY32 194 aa13.32□□□□□ -0.28
TTC39A-216ENST00000530004 OR8D2Q9GZM6 311 aa13.32□□□□□ -0.28
TTC39A-216ENST00000530004 C19orf25Q9UFG5 118 aaPredicted RBP13.32□□□□□ -0.28
TTC39A-216ENST00000530004 SLC13A4Q9UKG4 626 aa13.32□□□□□ -0.28
TTC39A-216ENST00000530004 ZNF443Q9Y2A4 671 aaPredicted RBP13.32□□□□□ -0.28
TTC39A-216ENST00000530004 IFT52Q9Y366 437 aa13.32□□□□□ -0.28
TTC39A-216ENST00000530004 HS3ST3B1Q9Y662 390 aa13.32□□□□□ -0.28
TTC39A-216ENST00000530004 ASPMQ8IZT6 3477 aa13.31□□□□□ -0.28
TTC39A-216ENST00000530004 LOC102723996A0A087X1L8 192 aa13.31□□□□□ -0.28
TTC39A-216ENST00000530004 C1QTNF9BB2RNN3 333 aa13.31□□□□□ -0.28
TTC39A-216ENST00000530004 SYT5O00445 386 aa13.31□□□□□ -0.28
TTC39A-216ENST00000530004 KLK10O43240 276 aa13.31□□□□□ -0.28
TTC39A-216ENST00000530004 HS6ST1O60243 411 aa13.31□□□□□ -0.28
TTC39A-216ENST00000530004 KIAA0513O60268 411 aa13.31□□□□□ -0.28
TTC39A-216ENST00000530004 DDAH2O95865 285 aa13.31□□□□□ -0.28
TTC39A-216ENST00000530004 C1QTNF9P0C862 333 aa13.31□□□□□ -0.28
TTC39A-216ENST00000530004 CT45A8P0DMV1 189 aa13.31□□□□□ -0.28
TTC39A-216ENST00000530004 CT45A9P0DMV2 189 aa13.31□□□□□ -0.28
TTC39A-216ENST00000530004 THRBP10828 461 aa13.31□□□□□ -0.28
TTC39A-216ENST00000530004 TRHRP34981 398 aaPredicted RBP13.31□□□□□ -0.28
TTC39A-216ENST00000530004 SLC37A1P57057 533 aa13.31□□□□□ -0.28
TTC39A-216ENST00000530004 IL10RAQ13651 578 aa13.31□□□□□ -0.28
TTC39A-216ENST00000530004 PDK3Q15120 406 aa13.31□□□□□ -0.28
TTC39A-216ENST00000530004 NNATQ16517 81 aa13.31□□□□□ -0.28
TTC39A-216ENST00000530004 CT45A2Q5DJT8 189 aa13.31□□□□□ -0.28
TTC39A-216ENST00000530004 DHRS4L2Q6PKH6 230 aa13.31□□□□□ -0.28
TTC39A-216ENST00000530004 CYP4Z1Q86W10 505 aa13.31□□□□□ -0.28
TTC39A-216ENST00000530004 MARVELD2Q8N4S9 558 aa13.31□□□□□ -0.28
TTC39A-216ENST00000530004 OR52J3Q8NH60 311 aa13.31□□□□□ -0.28
TTC39A-216ENST00000530004 OR14A16Q8NHC5 309 aa13.31□□□□□ -0.28
TTC39A-216ENST00000530004 TFAP2CQ92754 450 aa13.31□□□□□ -0.28
TTC39A-216ENST00000530004 DAZLQ92904 295 aaKnown RBP13.31□□□□□ -0.28
TTC39A-216ENST00000530004 C8orf44Q96CB5 159 aa13.31□□□□□ -0.28
TTC39A-216ENST00000530004 SAP130Q9H0E3 1048 aa13.31□□□□□ -0.28
TTC39A-216ENST00000530004 Q9N2J8 555 aa13.31□□□□□ -0.28
TTC39A-216ENST00000530004 ZNF232Q9UNY5 417 aa13.31□□□□□ -0.28
TTC39A-216ENST00000530004 NPIPA5A0A0B4J1W7 369 aa13.3□□□□□ -0.28
TTC39A-216ENST00000530004 CENPVL1A0A0U1RR11 272 aa13.3□□□□□ -0.28
TTC39A-216ENST00000530004 AGAP5A6NIR3 686 aa13.3□□□□□ -0.28
TTC39A-216ENST00000530004 NPIPA7E9PJI5 369 aa13.3□□□□□ -0.28
TTC39A-216ENST00000530004 SEMA7AO75326 666 aa13.3□□□□□ -0.28
TTC39A-216ENST00000530004 GADD45GO95257 159 aa13.3□□□□□ -0.28
TTC39A-216ENST00000530004 IGKV3-11P04433 115 aa13.3□□□□□ -0.28
TTC39A-216ENST00000530004 NPIPA8P0DM63 369 aa13.3□□□□□ -0.28
TTC39A-216ENST00000530004 IL7RP16871 459 aa13.3□□□□□ -0.28
TTC39A-216ENST00000530004 WT1P19544 449 aaPredicted RBP13.3□□□□□ -0.28
TTC39A-216ENST00000530004 RPS4Y1P22090 263 aaKnown RBP13.3□□□□□ -0.28
TTC39A-216ENST00000530004 OTX2P32243 289 aa13.3□□□□□ -0.28
TTC39A-216ENST00000530004 EIF2S3P41091 472 aaKnown RBP13.3□□□□□ -0.28
TTC39A-216ENST00000530004 LARS2Q15031 903 aaKnown RBP13.3□□□□□ -0.28
TTC39A-216ENST00000530004 ZIK1Q3SY52 487 aaPredicted RBP13.3□□□□□ -0.28
TTC39A-216ENST00000530004 KIRREL2Q6UWL6 708 aa13.3□□□□□ -0.28
TTC39A-216ENST00000530004 UNQ6494/PRO21346Q6UXR6 183 aa13.3□□□□□ -0.28
TTC39A-216ENST00000530004 CPEB2Q7Z5Q1 589 aaKnown RBP13.3□□□□□ -0.28
TTC39A-216ENST00000530004 PPP1R32Q7Z5V6 425 aa13.3□□□□□ -0.28
TTC39A-216ENST00000530004 DHRSXQ8N5I4 330 aa13.3□□□□□ -0.28
TTC39A-216ENST00000530004 OR4C15Q8NGM1 316 aa13.3□□□□□ -0.28
TTC39A-216ENST00000530004 OR6T1Q8NGN1 323 aa13.3□□□□□ -0.28
TTC39A-216ENST00000530004 ADAMTS17Q8TE56 1095 aa13.3□□□□□ -0.28
TTC39A-216ENST00000530004 ZNF721Q8TF20 911 aa13.3□□□□□ -0.28
TTC39A-216ENST00000530004 CYGBQ8WWM9 190 aa13.3□□□□□ -0.28
TTC39A-216ENST00000530004 RDH12Q96NR8 316 aa13.3□□□□□ -0.28
TTC39A-216ENST00000530004 NR1H4Q96RI1 486 aaPredicted RBP13.3□□□□□ -0.28
TTC39A-216ENST00000530004 ARHGDIGQ99819 225 aa13.3□□□□□ -0.28
TTC39A-216ENST00000530004 POLE3Q9NRF9 147 aa13.3□□□□□ -0.28
TTC39A-216ENST00000530004 ACER3Q9NUN7 267 aa13.3□□□□□ -0.28
TTC39A-216ENST00000530004 RHCGQ9UBD6 479 aa13.3□□□□□ -0.28
TTC39A-216ENST00000530004 TMEFF2Q9UIK5 374 aaPredicted RBP13.3□□□□□ -0.28
TTC39A-216ENST00000530004 CHST2Q9Y4C5 530 aa13.3□□□□□ -0.28
TTC39A-216ENST00000530004 IGHV3-20A0A0C4DH32 117 aa13.3□□□□□ -0.28
TTC39A-216ENST00000530004 TTC36A6NLP5 189 aa13.3□□□□□ -0.28
TTC39A-216ENST00000530004 CLDN24A6NM45 220 aa13.3□□□□□ -0.28
TTC39A-216ENST00000530004 PEX12O00623 359 aa13.3□□□□□ -0.28
TTC39A-216ENST00000530004 SOCS6O14544 535 aa13.3□□□□□ -0.28
TTC39A-216ENST00000530004 FFAR1O14842 300 aa13.3□□□□□ -0.28
TTC39A-216ENST00000530004 DBIP07108 87 aaKnown RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms