RNA–Protein interactions for RNA: ENST00000528232.5

CTNND1-218, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-218ENST00000528232 ALDH3B1P43353 468 aa6.82□□□□□ -1.32
CTNND1-218ENST00000528232 CXCR4P61073 352 aa6.82□□□□□ -1.32
CTNND1-218ENST00000528232 HNRNPA0Q13151 305 aaKnown RBP6.82□□□□□ -1.32
CTNND1-218ENST00000528232 ARHGAP19Q14CB8 494 aa6.82□□□□□ -1.32
CTNND1-218ENST00000528232 GPR19Q15760 415 aa6.82□□□□□ -1.32
CTNND1-218ENST00000528232 GFOD2Q3B7J2 385 aa6.82□□□□□ -1.32
CTNND1-218ENST00000528232 KLHDC8AQ8IYD2 350 aa6.82□□□□□ -1.32
CTNND1-218ENST00000528232 ZNF440Q8IYI8 595 aa6.82□□□□□ -1.32
CTNND1-218ENST00000528232 CSNK1A1LQ8N752 337 aa6.82□□□□□ -1.32
CTNND1-218ENST00000528232 OR51D1Q8NGF3 324 aa6.82□□□□□ -1.32
CTNND1-218ENST00000528232 HCAR2Q8TDS4 363 aa6.82□□□□□ -1.32
CTNND1-218ENST00000528232 SMAP2Q8WU79 429 aaPredicted RBP6.82□□□□□ -1.32
CTNND1-218ENST00000528232 NECTIN4Q96NY8 510 aa6.82□□□□□ -1.32
CTNND1-218ENST00000528232 OR4K3Q96R72 315 aa6.82□□□□□ -1.32
CTNND1-218ENST00000528232 BARD1Q99728 777 aaKnown RBP6.82□□□□□ -1.32
CTNND1-218ENST00000528232 C20orf27Q9GZN8 174 aa6.82□□□□□ -1.32
CTNND1-218ENST00000528232 RIMS3Q9UJD0 308 aa6.82□□□□□ -1.32
CTNND1-218ENST00000528232 SARDHQ9UL12 918 aa6.82□□□□□ -1.32
CTNND1-218ENST00000528232 ENPP4Q9Y6X5 453 aa6.82□□□□□ -1.32
CTNND1-218ENST00000528232 UBR3Q6ZT12 1888 aa6.82□□□□□ -1.32
CTNND1-218ENST00000528232 TEX13CA0A0J9YWL9 993 aa6.82□□□□□ -1.32
CTNND1-218ENST00000528232 HYKKA2RU49 373 aa6.82□□□□□ -1.32
CTNND1-218ENST00000528232 TVP23AA6NH52 213 aa6.82□□□□□ -1.32
CTNND1-218ENST00000528232 BHLHE40O14503 412 aa6.82□□□□□ -1.32
CTNND1-218ENST00000528232 BCAS1O75363 584 aaPredicted RBP6.82□□□□□ -1.32
CTNND1-218ENST00000528232 FARS2O95363 451 aaKnown RBP6.82□□□□□ -1.32
CTNND1-218ENST00000528232 C1SP09871 688 aa6.82□□□□□ -1.32
CTNND1-218ENST00000528232 DDCP20711 480 aa6.82□□□□□ -1.32
CTNND1-218ENST00000528232 PRLHRP49683 370 aa6.82□□□□□ -1.32
CTNND1-218ENST00000528232 RANP62826 216 aaKnown RBP6.82□□□□□ -1.32
CTNND1-218ENST00000528232 ZNF169Q14929 603 aaPredicted RBP6.82□□□□□ -1.32
CTNND1-218ENST00000528232 GTDC1Q4AE62 458 aa6.82□□□□□ -1.32
CTNND1-218ENST00000528232 TMEM41BQ5BJD5 291 aa6.82□□□□□ -1.32
CTNND1-218ENST00000528232 HS3ST5Q8IZT8 346 aa6.82□□□□□ -1.32
CTNND1-218ENST00000528232 LSMEM2Q8N112 164 aa6.82□□□□□ -1.32
CTNND1-218ENST00000528232 ZNF565Q8N9K5 539 aa6.82□□□□□ -1.32
CTNND1-218ENST00000528232 ACTRT3Q9BYD9 372 aa6.82□□□□□ -1.32
CTNND1-218ENST00000528232 LIN7BQ9HAP6 207 aa6.82□□□□□ -1.32
CTNND1-218ENST00000528232 SIAEQ9HAT2 523 aa6.82□□□□□ -1.32
CTNND1-218ENST00000528232 GDE1Q9NZC3 331 aa6.82□□□□□ -1.32
CTNND1-218ENST00000528232 KLRF1Q9NZS2 232 aa6.82□□□□□ -1.32
CTNND1-218ENST00000528232 ADAM18Q9Y3Q7 739 aa6.82□□□□□ -1.32
CTNND1-218ENST00000528232 MAN2B1O00754 1011 aa6.82□□□□□ -1.32
CTNND1-218ENST00000528232 ITGAMP11215 1152 aa6.82□□□□□ -1.32
CTNND1-218ENST00000528232 RNH1P13489 461 aaKnown RBP6.82□□□□□ -1.32
CTNND1-218ENST00000528232 GABRB3P28472 473 aa6.82□□□□□ -1.32
CTNND1-218ENST00000528232 HSD11B1P28845 292 aa6.82□□□□□ -1.32
CTNND1-218ENST00000528232 CCR7P32248 378 aa6.82□□□□□ -1.32
CTNND1-218ENST00000528232 CPOXP36551 454 aa6.82□□□□□ -1.32
CTNND1-218ENST00000528232 ZNF41P51814 821 aaPredicted RBP6.82□□□□□ -1.32
CTNND1-218ENST00000528232 PRKXP51817 358 aa6.82□□□□□ -1.32
CTNND1-218ENST00000528232 RPS26P62854 115 aaKnown RBP6.82□□□□□ -1.32
CTNND1-218ENST00000528232 TLE3Q04726 772 aa6.82□□□□□ -1.32
CTNND1-218ENST00000528232 DBPQ10586 325 aaPredicted RBP6.82□□□□□ -1.32
CTNND1-218ENST00000528232 PMS2P3Q13401 168 aa6.82□□□□□ -1.32
CTNND1-218ENST00000528232 HNRNPA1L2Q32P51 320 aaKnown RBP6.82□□□□□ -1.32
CTNND1-218ENST00000528232 CES4AQ5XG92 561 aa6.82□□□□□ -1.32
CTNND1-218ENST00000528232 SLC22A25Q6T423 547 aa6.82□□□□□ -1.32
CTNND1-218ENST00000528232 OR2T35Q8NGX2 323 aa6.82□□□□□ -1.32
CTNND1-218ENST00000528232 PHOSPHO2Q8TCD6 241 aa6.82□□□□□ -1.32
CTNND1-218ENST00000528232 TM9SF4Q92544 642 aa6.82□□□□□ -1.32
CTNND1-218ENST00000528232 PNPLA2Q96AD5 504 aa6.82□□□□□ -1.32
CTNND1-218ENST00000528232 MMABQ96EY8 250 aaPredicted RBP6.82□□□□□ -1.32
CTNND1-218ENST00000528232 CPNE2Q96FN4 548 aaPredicted RBP6.82□□□□□ -1.32
CTNND1-218ENST00000528232 HHIPL1Q96JK4 782 aa6.82□□□□□ -1.32
CTNND1-218ENST00000528232 SERINC2Q96SA4 455 aa6.82□□□□□ -1.32
CTNND1-218ENST00000528232 FEVQ99581 238 aa6.82□□□□□ -1.32
CTNND1-218ENST00000528232 KCNJ16Q9NPI9 418 aa6.82□□□□□ -1.32
CTNND1-218ENST00000528232 RPS10P5Q9NQ39 176 aa6.82□□□□□ -1.32
CTNND1-218ENST00000528232 CLDN24A6NM45 220 aa6.82□□□□□ -1.32
CTNND1-218ENST00000528232 RTCAO00442 366 aaKnown RBP6.82□□□□□ -1.32
CTNND1-218ENST00000528232 GJB3O75712 270 aa6.82□□□□□ -1.32
CTNND1-218ENST00000528232 RPP14O95059 124 aaKnown RBP6.82□□□□□ -1.32
CTNND1-218ENST00000528232 ALDOCP09972 364 aaKnown RBP6.82□□□□□ -1.32
CTNND1-218ENST00000528232 PTBP1P26599 531 aaKnown RBP eCLIP6.82□□□□□ -1.322e-7■■■■□ 23.9
CTNND1-218ENST00000528232 DCTP40126 519 aa6.82□□□□□ -1.32
CTNND1-218ENST00000528232 RABIFP47224 123 aa6.82□□□□□ -1.32
CTNND1-218ENST00000528232 MLLT10P55197 1068 aa6.82□□□□□ -1.32
CTNND1-218ENST00000528232 TRA2BP62995 288 aaKnown RBP6.82□□□□□ -1.32
CTNND1-218ENST00000528232 DEFB103AP81534 67 aa6.82□□□□□ -1.32
CTNND1-218ENST00000528232 CDC20Q12834 499 aa6.82□□□□□ -1.32
CTNND1-218ENST00000528232 SNTB2Q13425 540 aaKnown RBP6.82□□□□□ -1.32
CTNND1-218ENST00000528232 DEFB134Q4QY38 66 aa6.82□□□□□ -1.32
CTNND1-218ENST00000528232 LIPIQ6XZB0 460 aa6.82□□□□□ -1.32
CTNND1-218ENST00000528232 PARS2Q7L3T8 475 aaKnown RBP6.82□□□□□ -1.32
CTNND1-218ENST00000528232 NAGSQ8N159 534 aa6.82□□□□□ -1.32
CTNND1-218ENST00000528232 PNPLA1Q8N8W4 532 aa6.82□□□□□ -1.32
CTNND1-218ENST00000528232 TMEM185AQ8NFB2 350 aa6.82□□□□□ -1.32
CTNND1-218ENST00000528232 OR5AR1Q8NGP9 310 aa6.82□□□□□ -1.32
CTNND1-218ENST00000528232 ASB11Q8WXH4 323 aa6.82□□□□□ -1.32
CTNND1-218ENST00000528232 MYLIPQ8WY64 445 aa6.82□□□□□ -1.32
CTNND1-218ENST00000528232 ZNF419Q96HQ0 510 aaPredicted RBP6.82□□□□□ -1.32
CTNND1-218ENST00000528232 SLC46A2Q9BY10 475 aa6.82□□□□□ -1.32
CTNND1-218ENST00000528232 MARCH5Q9NX47 278 aa6.82□□□□□ -1.32
CTNND1-218ENST00000528232 LAMP5Q9UJQ1 280 aa6.82□□□□□ -1.32
CTNND1-218ENST00000528232 A0A0U1RQS6 177 aa6.81□□□□□ -1.32
CTNND1-218ENST00000528232 FAM221BA6H8Z2 402 aa6.81□□□□□ -1.32
CTNND1-218ENST00000528232 ZNF860A6NHJ4 632 aa6.81□□□□□ -1.32
CTNND1-218ENST00000528232 RNF212BA8MTL3 300 aa6.81□□□□□ -1.32
CTNND1-218ENST00000528232 BLOC1S5-TXNDC5H3BN57 136 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms