RNA–Protein interactions for RNA: ENST00000527881.1

TSKU-203, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSKU, Length 3,554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-203ENST00000527881 SORCS1Q8WY21 1168 aa11.73□□□□□ -0.53
TSKU-203ENST00000527881 TCEAL4Q96EI5 215 aa11.73□□□□□ -0.53
TSKU-203ENST00000527881 GPA33Q99795 319 aa11.73□□□□□ -0.53
TSKU-203ENST00000527881 YIPF4Q9BSR8 244 aa11.73□□□□□ -0.53
TSKU-203ENST00000527881 BRD9Q9H8M2 597 aa11.73□□□□□ -0.53
TSKU-203ENST00000527881 NOX3Q9HBY0 568 aa11.73□□□□□ -0.53
TSKU-203ENST00000527881 MED9Q9NWA0 146 aa11.73□□□□□ -0.53
TSKU-203ENST00000527881 COA4Q9NYJ1 87 aa11.73□□□□□ -0.53
TSKU-203ENST00000527881 SLC13A4Q9UKG4 626 aa11.73□□□□□ -0.53
TSKU-203ENST00000527881 PRAF2O60831 178 aa11.72□□□□□ -0.53
TSKU-203ENST00000527881 SEMA7AO75326 666 aa11.72□□□□□ -0.53
TSKU-203ENST00000527881 STX11O75558 287 aa11.72□□□□□ -0.53
TSKU-203ENST00000527881 RECKO95980 971 aa11.72□□□□□ -0.53
TSKU-203ENST00000527881 GIPP09681 153 aaPredicted RBP11.72□□□□□ -0.53
TSKU-203ENST00000527881 ZNF8P17098 575 aaPredicted RBP11.72□□□□□ -0.53
TSKU-203ENST00000527881 SPAM1P38567 509 aa11.72□□□□□ -0.53
TSKU-203ENST00000527881 STAT5AP42229 794 aa11.72□□□□□ -0.53
TSKU-203ENST00000527881 MANFP55145 182 aaKnown RBP11.72□□□□□ -0.53
TSKU-203ENST00000527881 PCBP3P57721 371 aaKnown RBP11.72□□□□□ -0.53
TSKU-203ENST00000527881 UBE2MP61081 183 aaKnown RBP11.72□□□□□ -0.53
TSKU-203ENST00000527881 ZNF322Q6U7Q0 402 aaPredicted RBP11.72□□□□□ -0.53
TSKU-203ENST00000527881 APOOLQ6UXV4 268 aa11.72□□□□□ -0.53
TSKU-203ENST00000527881 SPAG16Q8N0X2 631 aa11.72□□□□□ -0.53
TSKU-203ENST00000527881 MMP21Q8N119 569 aa11.72□□□□□ -0.53
TSKU-203ENST00000527881 ING5Q8WYH8 240 aa11.72□□□□□ -0.53
TSKU-203ENST00000527881 KCTD12Q96CX2 325 aaKnown RBP11.72□□□□□ -0.53
TSKU-203ENST00000527881 ORAI3Q9BRQ5 295 aa11.72□□□□□ -0.53
TSKU-203ENST00000527881 ADAT1Q9BUB4 502 aaKnown RBP11.72□□□□□ -0.53
TSKU-203ENST00000527881 TTTY10Q9BZA0 68 aa11.72□□□□□ -0.53
TSKU-203ENST00000527881 PRG3Q9Y2Y8 225 aaPredicted RBP11.72□□□□□ -0.53
TSKU-203ENST00000527881 DAPL1A0PJW8 107 aa11.72□□□□□ -0.53
TSKU-203ENST00000527881 SELENOFO60613 162 aa11.72□□□□□ -0.53
TSKU-203ENST00000527881 AKIRIN2Q53H80 203 aa11.72□□□□□ -0.53
TSKU-203ENST00000527881 PRAMEF13Q5VWM6 474 aa11.72□□□□□ -0.53
TSKU-203ENST00000527881 SMARCD3Q6STE5 483 aa11.72□□□□□ -0.53
TSKU-203ENST00000527881 SERPINA12Q8IW75 414 aa11.72□□□□□ -0.53
TSKU-203ENST00000527881 OR4D9Q8NGE8 314 aa11.72□□□□□ -0.53
TSKU-203ENST00000527881 OR4D11Q8NGI4 311 aa11.72□□□□□ -0.53
TSKU-203ENST00000527881 TNFAIP8L1Q8WVP5 186 aa11.72□□□□□ -0.53
TSKU-203ENST00000527881 THAP4Q8WY91 577 aa11.72□□□□□ -0.53
TSKU-203ENST00000527881 KAT2AQ92830 837 aa11.72□□□□□ -0.53
TSKU-203ENST00000527881 TCEAL3Q969E4 200 aa11.72□□□□□ -0.53
TSKU-203ENST00000527881 MFFQ9GZY8 342 aa11.72□□□□□ -0.53
TSKU-203ENST00000527881 SMG9Q9H0W8 520 aaKnown RBP11.72□□□□□ -0.53
TSKU-203ENST00000527881 YKT6O15498 198 aa11.72□□□□□ -0.53
TSKU-203ENST00000527881 AHRP35869 848 aa11.72□□□□□ -0.53
TSKU-203ENST00000527881 SLC6A12P48065 614 aa11.72□□□□□ -0.53
TSKU-203ENST00000527881 CCR8P51685 355 aa11.72□□□□□ -0.53
TSKU-203ENST00000527881 PFN3P60673 137 aa11.72□□□□□ -0.53
TSKU-203ENST00000527881 CDH26Q8IXH8 852 aa11.72□□□□□ -0.53
TSKU-203ENST00000527881 OR52B4Q8NGK2 314 aa11.72□□□□□ -0.53
TSKU-203ENST00000527881 PDGFDQ9GZP0 370 aaPredicted RBP11.72□□□□□ -0.53
TSKU-203ENST00000527881 RALGAPA2Q2PPJ7 1873 aa11.71□□□□□ -0.53
TSKU-203ENST00000527881 SULT1B1O43704 296 aa11.71□□□□□ -0.53
TSKU-203ENST00000527881 UBXN7O94888 489 aa11.71□□□□□ -0.53
TSKU-203ENST00000527881 ACP5P13686 325 aa11.71□□□□□ -0.53
TSKU-203ENST00000527881 GNSP15586 552 aa11.71□□□□□ -0.53
TSKU-203ENST00000527881 CDH4P55283 916 aa11.71□□□□□ -0.53
TSKU-203ENST00000527881 RAG2P55895 527 aa11.71□□□□□ -0.53
TSKU-203ENST00000527881 TAS2R41P59536 307 aa11.71□□□□□ -0.53
TSKU-203ENST00000527881 MEF2AQ02078 507 aaPredicted RBP11.71□□□□□ -0.53
TSKU-203ENST00000527881 EEF1A2Q05639 463 aaKnown RBP11.71□□□□□ -0.53
TSKU-203ENST00000527881 ZNF155Q12901 538 aaPredicted RBP11.71□□□□□ -0.53
TSKU-203ENST00000527881 SERTAD2Q14140 314 aa11.71□□□□□ -0.53
TSKU-203ENST00000527881 LYPLAL1Q5VWZ2 237 aa11.71□□□□□ -0.53
TSKU-203ENST00000527881 SERPINA13PQ6UXR4 307 aa11.71□□□□□ -0.53
TSKU-203ENST00000527881 ZNF704Q6ZNC4 412 aaPredicted RBP11.71□□□□□ -0.53
TSKU-203ENST00000527881 MCATQ8IVS2 390 aaKnown RBP11.71□□□□□ -0.53
TSKU-203ENST00000527881 OR1M1Q8NGA1 313 aa11.71□□□□□ -0.53
TSKU-203ENST00000527881 ASB11Q8WXH4 323 aa11.71□□□□□ -0.53
TSKU-203ENST00000527881 FOXJ1Q92949 421 aa11.71□□□□□ -0.53
TSKU-203ENST00000527881 ZNF707Q96C28 371 aaPredicted RBP11.71□□□□□ -0.53
TSKU-203ENST00000527881 ELP4Q96EB1 424 aa11.71□□□□□ -0.53
TSKU-203ENST00000527881 FAM46AQ96IP4 442 aaKnown RBP11.71□□□□□ -0.53
TSKU-203ENST00000527881 DMRTA2Q96SC8 542 aa11.71□□□□□ -0.53
TSKU-203ENST00000527881 KCNK12Q9HB15 430 aa11.71□□□□□ -0.53
TSKU-203ENST00000527881 TRIM36Q9NQ86 728 aa11.71□□□□□ -0.53
TSKU-203ENST00000527881 IRAK3Q9Y616 596 aa11.71□□□□□ -0.53
TSKU-203ENST00000527881 KPNA3O00505 521 aaPredicted RBP11.71□□□□□ -0.54
TSKU-203ENST00000527881 SOCS6O14544 535 aa11.71□□□□□ -0.54
TSKU-203ENST00000527881 SMAD9O15198 467 aaKnown RBP11.71□□□□□ -0.54
TSKU-203ENST00000527881 ZNF35P13682 527 aa11.71□□□□□ -0.54
TSKU-203ENST00000527881 PRKAG1P54619 331 aa11.71□□□□□ -0.54
TSKU-203ENST00000527881 DUSP28Q4G0W2 176 aa11.71□□□□□ -0.54
TSKU-203ENST00000527881 EOGTQ5NDL2 527 aa11.71□□□□□ -0.54
TSKU-203ENST00000527881 SLC6A19Q695T7 634 aa11.71□□□□□ -0.54
TSKU-203ENST00000527881 OR11G2Q8NGC1 345 aa11.71□□□□□ -0.54
TSKU-203ENST00000527881 OR5M9Q8NGP3 310 aa11.71□□□□□ -0.54
TSKU-203ENST00000527881 BBS10Q8TAM1 723 aa11.71□□□□□ -0.54
TSKU-203ENST00000527881 GNPDA2Q8TDQ7 276 aa11.71□□□□□ -0.54
TSKU-203ENST00000527881 ZNF354BQ96LW1 612 aa11.71□□□□□ -0.54
TSKU-203ENST00000527881 ZNF285Q96NJ3 590 aa11.71□□□□□ -0.54
TSKU-203ENST00000527881 ALG8Q9BVK2 526 aa11.71□□□□□ -0.54
TSKU-203ENST00000527881 MBD2Q9UBB5 411 aa11.71□□□□□ -0.54
TSKU-203ENST00000527881 ABHD14A-ACY1A0A1B0GW23 586 aa11.71□□□□□ -0.54
TSKU-203ENST00000527881 TTLL8A6PVC2 850 aa11.71□□□□□ -0.54
TSKU-203ENST00000527881 J3QLW9 94 aa11.71□□□□□ -0.54
TSKU-203ENST00000527881 K7ERQ8 282 aa11.71□□□□□ -0.54
TSKU-203ENST00000527881 S100A6P06703 90 aa11.71□□□□□ -0.54
TSKU-203ENST00000527881 IL3P08700 152 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms