RNA–Protein interactions for RNA: ENST00000527046.5

NEDD8-205, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-205ENST00000527046 SACM1LQ9NTJ5 587 aa9.85□□□□□ -0.83
NEDD8-205ENST00000527046 CNIH4Q9P003 139 aa9.85□□□□□ -0.83
NEDD8-205ENST00000527046 ABI3Q9P2A4 366 aa9.85□□□□□ -0.83
NEDD8-205ENST00000527046 ZFYVE26Q68DK2 2539 aa9.85□□□□□ -0.83
NEDD8-205ENST00000527046 FREM3P0C091 2139 aa9.85□□□□□ -0.83
NEDD8-205ENST00000527046 SHANK1Q9Y566 2161 aa9.84□□□□□ -0.83
NEDD8-205ENST00000527046 CCT8L1PA6NM43 557 aa9.84□□□□□ -0.83
NEDD8-205ENST00000527046 ALG1L2C9J202 215 aa9.84□□□□□ -0.83
NEDD8-205ENST00000527046 TP53I11O14683 189 aa9.84□□□□□ -0.83
NEDD8-205ENST00000527046 ADAM11O75078 769 aa9.84□□□□□ -0.83
NEDD8-205ENST00000527046 UBOX5O94941 541 aa9.84□□□□□ -0.83
NEDD8-205ENST00000527046 WISP1O95388 367 aa9.84□□□□□ -0.83
NEDD8-205ENST00000527046 EPPINO95925 133 aa9.84□□□□□ -0.83
NEDD8-205ENST00000527046 ARAFP10398 606 aa9.84□□□□□ -0.83
NEDD8-205ENST00000527046 CD46P15529 392 aa9.84□□□□□ -0.83
NEDD8-205ENST00000527046 LCN1P31025 176 aa9.84□□□□□ -0.83
NEDD8-205ENST00000527046 RFX3P48380 749 aa9.84□□□□□ -0.83
NEDD8-205ENST00000527046 MEOX1P50221 254 aa9.84□□□□□ -0.83
NEDD8-205ENST00000527046 ATP12AP54707 1039 aa9.84□□□□□ -0.83
NEDD8-205ENST00000527046 TXNL4AP83876 142 aaKnown RBP9.84□□□□□ -0.83
NEDD8-205ENST00000527046 SLC25A3Q00325 362 aa9.84□□□□□ -0.83
NEDD8-205ENST00000527046 NFATC3Q12968 1075 aa9.84□□□□□ -0.83
NEDD8-205ENST00000527046 EFR3AQ14156 821 aa9.84□□□□□ -0.83
NEDD8-205ENST00000527046 CD226Q15762 336 aa9.84□□□□□ -0.83
NEDD8-205ENST00000527046 MMEL1Q495T6 779 aa9.84□□□□□ -0.83
NEDD8-205ENST00000527046 RPS26P11Q5JNZ5 115 aaPredicted RBP9.84□□□□□ -0.83
NEDD8-205ENST00000527046 RINLQ6ZS11 566 aa9.84□□□□□ -0.83
NEDD8-205ENST00000527046 COMTD1Q86VU5 262 aa9.84□□□□□ -0.83
NEDD8-205ENST00000527046 CHERPQ8IWX8 916 aaKnown RBP9.84□□□□□ -0.83
NEDD8-205ENST00000527046 CISD2Q8N5K1 135 aaKnown RBP9.84□□□□□ -0.83
NEDD8-205ENST00000527046 TEX19Q8NA77 164 aa9.84□□□□□ -0.83
NEDD8-205ENST00000527046 PCYOX1LQ8NBM8 494 aa9.84□□□□□ -0.83
NEDD8-205ENST00000527046 OR10A6Q8NH74 314 aa9.84□□□□□ -0.83
NEDD8-205ENST00000527046 SLC7A6OSQ96CW6 309 aaPredicted RBP9.84□□□□□ -0.83
NEDD8-205ENST00000527046 SNRNP40Q96DI7 357 aaKnown RBP9.84□□□□□ -0.83
NEDD8-205ENST00000527046 TMEM19Q96HH6 336 aa9.84□□□□□ -0.83
NEDD8-205ENST00000527046 THUMPD3Q9BV44 507 aaKnown RBP9.84□□□□□ -0.83
NEDD8-205ENST00000527046 UBQLN3Q9H347 655 aa9.84□□□□□ -0.83
NEDD8-205ENST00000527046 BCL2L10Q9HD36 194 aa9.84□□□□□ -0.83
NEDD8-205ENST00000527046 TMEM181Q9P2C4 612 aa9.84□□□□□ -0.83
NEDD8-205ENST00000527046 ABCD2Q9UBJ2 740 aa9.84□□□□□ -0.83
NEDD8-205ENST00000527046 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.84□□□□□ -0.83
NEDD8-205ENST00000527046 LIPT1Q9Y234 373 aa9.84□□□□□ -0.83
NEDD8-205ENST00000527046 COL6A6A6NMZ7 2263 aa9.84□□□□□ -0.83
NEDD8-205ENST00000527046 HEATR5AQ86XA9 2040 aa9.83□□□□□ -0.84
NEDD8-205ENST00000527046 IGLV3-32A0A0A0MS00 114 aa9.83□□□□□ -0.84
NEDD8-205ENST00000527046 A0A1W2PQD3 144 aa9.83□□□□□ -0.84
NEDD8-205ENST00000527046 PRAMEF25A6NGN4 478 aa9.83□□□□□ -0.84
NEDD8-205ENST00000527046 AGAP5A6NIR3 686 aa9.83□□□□□ -0.84
NEDD8-205ENST00000527046 CLDN24A6NM45 220 aa9.83□□□□□ -0.84
NEDD8-205ENST00000527046 KIAA0513O60268 411 aa9.83□□□□□ -0.84
NEDD8-205ENST00000527046 STX11O75558 287 aa9.83□□□□□ -0.84
NEDD8-205ENST00000527046 PGM3O95394 542 aa9.83□□□□□ -0.84
NEDD8-205ENST00000527046 AK1P00568 194 aa9.83□□□□□ -0.84
NEDD8-205ENST00000527046 PPIBP23284 216 aaKnown RBP9.83□□□□□ -0.84
NEDD8-205ENST00000527046 EVI2BP34910 448 aa9.83□□□□□ -0.84
NEDD8-205ENST00000527046 RFC3P40938 356 aa9.83□□□□□ -0.84
NEDD8-205ENST00000527046 CASRP41180 1078 aa9.83□□□□□ -0.84
NEDD8-205ENST00000527046 TMED10P49755 219 aaKnown RBP9.83□□□□□ -0.84
NEDD8-205ENST00000527046 RNF144AP50876 292 aaPredicted RBP9.83□□□□□ -0.84
NEDD8-205ENST00000527046 TDGF1P3P51864 188 aa9.83□□□□□ -0.84
NEDD8-205ENST00000527046 PCBP3P57721 371 aaKnown RBP9.83□□□□□ -0.84
NEDD8-205ENST00000527046 PSME3P61289 254 aa9.83□□□□□ -0.84
NEDD8-205ENST00000527046 BNIP1Q12981 228 aa9.83□□□□□ -0.84
NEDD8-205ENST00000527046 SNTA1Q13424 505 aa9.83□□□□□ -0.84
NEDD8-205ENST00000527046 GPR68Q15743 365 aa9.83□□□□□ -0.84
NEDD8-205ENST00000527046 SLC30A6Q6NXT4 461 aa9.83□□□□□ -0.84
NEDD8-205ENST00000527046 ANGPTL8Q6UXH0 198 aa9.83□□□□□ -0.84
NEDD8-205ENST00000527046 SERPINA11Q86U17 422 aa9.83□□□□□ -0.84
NEDD8-205ENST00000527046 LSRQ86X29 649 aaPredicted RBP9.83□□□□□ -0.84
NEDD8-205ENST00000527046 FADS6Q8N9I5 356 aa9.83□□□□□ -0.84
NEDD8-205ENST00000527046 TMEM178AQ8NBL3 297 aa9.83□□□□□ -0.84
NEDD8-205ENST00000527046 DUSP19Q8WTR2 217 aa9.83□□□□□ -0.84
NEDD8-205ENST00000527046 TMCO6Q96DC7 493 aa9.83□□□□□ -0.84
NEDD8-205ENST00000527046 TMEM41AQ96HV5 264 aa9.83□□□□□ -0.84
NEDD8-205ENST00000527046 GNRHR2Q96P88 292 aa9.83□□□□□ -0.84
NEDD8-205ENST00000527046 NPAS1Q99742 590 aa9.83□□□□□ -0.84
NEDD8-205ENST00000527046 HOPXQ9BPY8 73 aaPredicted RBP9.83□□□□□ -0.84
NEDD8-205ENST00000527046 TREX2Q9BQ50 279 aaPredicted RBP9.83□□□□□ -0.84
NEDD8-205ENST00000527046 FAM173AQ9BQD7 235 aa9.83□□□□□ -0.84
NEDD8-205ENST00000527046 WFDC6Q9BQY6 131 aa9.83□□□□□ -0.84
NEDD8-205ENST00000527046 G6PC3Q9BUM1 346 aa9.83□□□□□ -0.84
NEDD8-205ENST00000527046 PIF1Q9H611 641 aa9.83□□□□□ -0.84
NEDD8-205ENST00000527046 MTHFD2LQ9H903 347 aaPredicted RBP9.83□□□□□ -0.84
NEDD8-205ENST00000527046 POLE3Q9NRF9 147 aa9.83□□□□□ -0.84
NEDD8-205ENST00000527046 UBQLN4Q9NRR5 601 aa9.83□□□□□ -0.84
NEDD8-205ENST00000527046 EXD2Q9NVH0 621 aa9.83□□□□□ -0.84
NEDD8-205ENST00000527046 ASF1BQ9NVP2 202 aa9.83□□□□□ -0.84
NEDD8-205ENST00000527046 GID8Q9NWU2 228 aa9.83□□□□□ -0.84
NEDD8-205ENST00000527046 TAS2R1Q9NYW7 299 aa9.83□□□□□ -0.84
NEDD8-205ENST00000527046 CD300AQ9UGN4 299 aa9.83□□□□□ -0.84
NEDD8-205ENST00000527046 KLF13Q9Y2Y9 288 aaPredicted RBP9.83□□□□□ -0.84
NEDD8-205ENST00000527046 PCDHGB3Q9Y5G1 929 aa9.83□□□□□ -0.84
NEDD8-205ENST00000527046 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.83□□□□□ -0.84
NEDD8-205ENST00000527046 BOD1L1Q8NFC6 3051 aa9.83□□□□□ -0.84
NEDD8-205ENST00000527046 BSNQ9UPA5 3926 aa9.83□□□□□ -0.84
NEDD8-205ENST00000527046 B2RBV5 119 aa9.82□□□□□ -0.84
NEDD8-205ENST00000527046 KLRC4-KLRK1H3BQV0 150 aa9.82□□□□□ -0.84
NEDD8-205ENST00000527046 SNPHO15079 494 aa9.82□□□□□ -0.84
NEDD8-205ENST00000527046 ZIC3O60481 467 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms