RNA–Protein interactions for RNA: ENST00000526866.5

CDC27-203, Transcript of cell division cycle 27, humanhuman

TSL 2

Gene CDC27, Length 1,420 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-203ENST00000526866 VDAC3Q9Y277 283 aa16.58■□□□□ 0.24
CDC27-203ENST00000526866 EMC9Q9Y3B6 208 aa16.58■□□□□ 0.24
CDC27-203ENST00000526866 USF3Q68DE3 2245 aa16.57■□□□□ 0.24
CDC27-203ENST00000526866 UQCRHLA0A096LP55 91 aa16.57■□□□□ 0.24
CDC27-203ENST00000526866 IGLV3-32A0A0A0MS00 114 aa16.57■□□□□ 0.24
CDC27-203ENST00000526866 UTS2O95399 124 aa16.57■□□□□ 0.24
CDC27-203ENST00000526866 ANGPTL1O95841 491 aa16.57■□□□□ 0.24
CDC27-203ENST00000526866 ENO1P06733 434 aaKnown RBP16.57■□□□□ 0.24
CDC27-203ENST00000526866 PPP3CBP16298 524 aa16.57■□□□□ 0.24
CDC27-203ENST00000526866 ATP5F1P24539 256 aaPredicted RBP16.57■□□□□ 0.24
CDC27-203ENST00000526866 PKNOX1P55347 436 aa16.57■□□□□ 0.24
CDC27-203ENST00000526866 CKAP4Q07065 602 aaKnown RBP16.57■□□□□ 0.24
CDC27-203ENST00000526866 C17orf67Q0P5P2 114 aa16.57■□□□□ 0.24
CDC27-203ENST00000526866 LCP2Q13094 533 aa16.57■□□□□ 0.24
CDC27-203ENST00000526866 ZNHIT3Q15649 155 aaPredicted RBP16.57■□□□□ 0.24
CDC27-203ENST00000526866 SPDYAQ5MJ70 313 aa16.57■□□□□ 0.24
CDC27-203ENST00000526866 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.57■□□□□ 0.24
CDC27-203ENST00000526866 ELP4Q96EB1 424 aa16.57■□□□□ 0.24
CDC27-203ENST00000526866 MIEF1Q9NQG6 463 aa16.57■□□□□ 0.24
CDC27-203ENST00000526866 ZNF701Q9NV72 531 aaPredicted RBP16.57■□□□□ 0.24
CDC27-203ENST00000526866 TAS2R7Q9NYW3 318 aa16.57■□□□□ 0.24
CDC27-203ENST00000526866 MRTO4Q9UKD2 239 aaKnown RBP16.57■□□□□ 0.24
CDC27-203ENST00000526866 GRID1Q9ULK0 1009 aa16.57■□□□□ 0.24
CDC27-203ENST00000526866 STK38LQ9Y2H1 464 aa16.57■□□□□ 0.24
CDC27-203ENST00000526866 GXYLT2A0PJZ3 443 aa16.56■□□□□ 0.24
CDC27-203ENST00000526866 SERTM1A2A2V5 107 aa16.56■□□□□ 0.24
CDC27-203ENST00000526866 SS18L1O75177 396 aaPredicted RBP16.56■□□□□ 0.24
CDC27-203ENST00000526866 PLGP00747 810 aaPredicted RBP16.56■□□□□ 0.24
CDC27-203ENST00000526866 IGKV1D-16P01601 117 aa16.56■□□□□ 0.24
CDC27-203ENST00000526866 NID1P14543 1247 aa16.56■□□□□ 0.24
CDC27-203ENST00000526866 NTSP30990 170 aa16.56■□□□□ 0.24
CDC27-203ENST00000526866 PSMD4P55036 377 aaKnown RBP16.56■□□□□ 0.24
CDC27-203ENST00000526866 FOXA1P55317 472 aa16.56■□□□□ 0.24
CDC27-203ENST00000526866 PRR5P85299 388 aa16.56■□□□□ 0.24
CDC27-203ENST00000526866 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.56■□□□□ 0.24
CDC27-203ENST00000526866 GRAMD1BQ3KR37 738 aa16.56■□□□□ 0.24
CDC27-203ENST00000526866 PLPPR2Q96GM1 343 aa16.56■□□□□ 0.24
CDC27-203ENST00000526866 GMPPAQ96IJ6 420 aaPredicted RBP16.56■□□□□ 0.24
CDC27-203ENST00000526866 AMDHD1Q96NU7 426 aa16.56■□□□□ 0.24
CDC27-203ENST00000526866 FMO2Q99518 471 aa16.56■□□□□ 0.24
CDC27-203ENST00000526866 NPAS1Q99742 590 aa16.56■□□□□ 0.24
CDC27-203ENST00000526866 TSPYL1Q9H0U9 437 aa16.56■□□□□ 0.24
CDC27-203ENST00000526866 POLR3HQ9Y535 204 aaPredicted RBP16.56■□□□□ 0.24
CDC27-203ENST00000526866 RTTNQ86VV8 2226 aa16.56■□□□□ 0.24
CDC27-203ENST00000526866 PRR14LQ5THK1 2151 aa16.55■□□□□ 0.24
CDC27-203ENST00000526866 A0A087WUV0 522 aaPredicted RBP16.55■□□□□ 0.24
CDC27-203ENST00000526866 IL11P20809 199 aa16.55■□□□□ 0.24
CDC27-203ENST00000526866 GCAP28676 217 aa16.55■□□□□ 0.24
CDC27-203ENST00000526866 ECHS1P30084 290 aa16.55■□□□□ 0.24
CDC27-203ENST00000526866 GABRA3P34903 492 aa16.55■□□□□ 0.24
CDC27-203ENST00000526866 PRKAA2P54646 552 aa16.55■□□□□ 0.24
CDC27-203ENST00000526866 CTBP2P56545 445 aa16.55■□□□□ 0.24
CDC27-203ENST00000526866 CAPRIN1Q14444 709 aaKnown RBP16.55■□□□□ 0.24
CDC27-203ENST00000526866 TIFABQ6ZNK6 161 aa16.55■□□□□ 0.24
CDC27-203ENST00000526866 CXXC5Q7LFL8 322 aaKnown RBP16.55■□□□□ 0.24
CDC27-203ENST00000526866 WFDC8Q8IUA0 241 aa16.55■□□□□ 0.24
CDC27-203ENST00000526866 SLC22A9Q8IVM8 553 aa16.55■□□□□ 0.24
CDC27-203ENST00000526866 OR10D3Q8NH80 312 aa16.55■□□□□ 0.24
CDC27-203ENST00000526866 IFT81Q8WYA0 676 aa16.55■□□□□ 0.24
CDC27-203ENST00000526866 PIK3R3Q92569 461 aa16.55■□□□□ 0.24
CDC27-203ENST00000526866 SLC9A6Q92581 669 aa16.55■□□□□ 0.24
CDC27-203ENST00000526866 L3HYPDHQ96EM0 354 aa16.55■□□□□ 0.24
CDC27-203ENST00000526866 ADGRG7Q96K78 797 aa16.55■□□□□ 0.24
CDC27-203ENST00000526866 TMEM204Q9BSN7 226 aa16.55■□□□□ 0.24
CDC27-203ENST00000526866 GSTO2Q9H4Y5 243 aa16.55■□□□□ 0.24
CDC27-203ENST00000526866 CXorf56Q9H5V9 222 aa16.55■□□□□ 0.24
CDC27-203ENST00000526866 MYNNQ9NPC7 610 aa16.55■□□□□ 0.24
CDC27-203ENST00000526866 EXOC1LA0A1B0GW35 172 aa16.54■□□□□ 0.24
CDC27-203ENST00000526866 CCDC151A5D8V7 595 aa16.54■□□□□ 0.24
CDC27-203ENST00000526866 HS3ST1O14792 307 aa16.54■□□□□ 0.24
CDC27-203ENST00000526866 CXCL13O43927 109 aa16.54■□□□□ 0.24
CDC27-203ENST00000526866 OPN1LWP04000 364 aa16.54■□□□□ 0.24
CDC27-203ENST00000526866 NR1H2P55055 460 aa16.54■□□□□ 0.24
CDC27-203ENST00000526866 ATP5J2P56134 94 aa16.54■□□□□ 0.24
CDC27-203ENST00000526866 CTU2Q2VPK5 515 aaKnown RBP16.54■□□□□ 0.24
CDC27-203ENST00000526866 ZNF611Q8N823 705 aa16.54■□□□□ 0.24
CDC27-203ENST00000526866 ACTR6Q9GZN1 396 aa16.54■□□□□ 0.24
CDC27-203ENST00000526866 C3orf14Q9HBI5 128 aa16.54■□□□□ 0.24
CDC27-203ENST00000526866 MID1IP1Q9NPA3 183 aa16.54■□□□□ 0.24
CDC27-203ENST00000526866 EQTNQ9NQ60 294 aa16.54■□□□□ 0.24
CDC27-203ENST00000526866 STOML1Q9UBI4 398 aa16.54■□□□□ 0.24
CDC27-203ENST00000526866 FBN1P35555 2871 aaKnown RBP16.54■□□□□ 0.24
CDC27-203ENST00000526866 UBFD1O14562 309 aaKnown RBP16.53■□□□□ 0.24
CDC27-203ENST00000526866 KCNH1O95259 989 aa16.53■□□□□ 0.24
CDC27-203ENST00000526866 ZNF17P17021 662 aa16.53■□□□□ 0.24
CDC27-203ENST00000526866 KRTAP1-1Q07627 177 aa16.53■□□□□ 0.24
CDC27-203ENST00000526866 TNK1Q13470 666 aa16.53■□□□□ 0.24
CDC27-203ENST00000526866 BEND4Q6ZU67 534 aa16.53■□□□□ 0.24
CDC27-203ENST00000526866 ZNF551Q7Z340 670 aaPredicted RBP16.53■□□□□ 0.24
CDC27-203ENST00000526866 GALNT10Q86SR1 603 aa16.53■□□□□ 0.24
CDC27-203ENST00000526866 EXOC3L1Q86VI1 746 aa16.53■□□□□ 0.24
CDC27-203ENST00000526866 WDR75Q8IWA0 830 aaKnown RBP16.53■□□□□ 0.24
CDC27-203ENST00000526866 ANP32BQ92688 251 aaKnown RBP16.53■□□□□ 0.24
CDC27-203ENST00000526866 PAQR5Q9NXK6 330 aaPredicted RBP16.53■□□□□ 0.24
CDC27-203ENST00000526866 MCTS1Q9ULC4 181 aaKnown RBP16.53■□□□□ 0.24
CDC27-203ENST00000526866 CHD3Q12873 2000 aaKnown RBP16.53■□□□□ 0.24
CDC27-203ENST00000526866 TMCC2O75069 709 aa16.53■□□□□ 0.24
CDC27-203ENST00000526866 SOX30O94993 753 aa16.53■□□□□ 0.24
CDC27-203ENST00000526866 SYNGR4O95473 234 aa16.53■□□□□ 0.24
CDC27-203ENST00000526866 IMPG1Q17R60 797 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms