RNA–Protein interactions for RNA: ENST00000525257.1

USP47-205, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 4

Gene USP47, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-205ENST00000525257 ANGPTL1O95841 491 aa21.47■■□□□ 1.03
USP47-205ENST00000525257 NID1P14543 1247 aa21.47■■□□□ 1.03
USP47-205ENST00000525257 PPP3CBP16298 524 aa21.47■■□□□ 1.03
USP47-205ENST00000525257 GSTM5P46439 218 aa21.47■■□□□ 1.03
USP47-205ENST00000525257 CTBP2P56545 445 aa21.47■■□□□ 1.03
USP47-205ENST00000525257 STAC2Q6ZMT1 411 aa21.47■■□□□ 1.03
USP47-205ENST00000525257 WFDC8Q8IUA0 241 aa21.47■■□□□ 1.03
USP47-205ENST00000525257 OR2L13Q8N349 312 aa21.47■■□□□ 1.03
USP47-205ENST00000525257 CXorf56Q9H5V9 222 aa21.47■■□□□ 1.03
USP47-205ENST00000525257 PLSCR4Q9NRQ2 329 aa21.47■■□□□ 1.03
USP47-205ENST00000525257 RTTNQ86VV8 2226 aa21.47■■□□□ 1.03
USP47-205ENST00000525257 SLITRK5O94991 958 aa21.46■■□□□ 1.03
USP47-205ENST00000525257 ENO1P06733 434 aaKnown RBP21.46■■□□□ 1.03
USP47-205ENST00000525257 PAX1P15863 534 aa21.46■■□□□ 1.03
USP47-205ENST00000525257 IMPDH1P20839 514 aa21.46■■□□□ 1.03
USP47-205ENST00000525257 NTSP30990 170 aa21.46■■□□□ 1.03
USP47-205ENST00000525257 PSMD4P55036 377 aaKnown RBP21.46■■□□□ 1.03
USP47-205ENST00000525257 CKAP4Q07065 602 aaKnown RBP21.46■■□□□ 1.03
USP47-205ENST00000525257 C17orf67Q0P5P2 114 aa21.46■■□□□ 1.03
USP47-205ENST00000525257 LCP2Q13094 533 aa21.46■■□□□ 1.03
USP47-205ENST00000525257 TMEM44Q2T9K0 475 aa21.46■■□□□ 1.03
USP47-205ENST00000525257 GRAMD1BQ3KR37 738 aa21.46■■□□□ 1.03
USP47-205ENST00000525257 APOOLQ6UXV4 268 aa21.46■■□□□ 1.03
USP47-205ENST00000525257 SH2D5Q6ZV89 423 aa21.46■■□□□ 1.03
USP47-205ENST00000525257 CXXC5Q7LFL8 322 aaKnown RBP21.46■■□□□ 1.03
USP47-205ENST00000525257 PLPPR2Q96GM1 343 aa21.46■■□□□ 1.03
USP47-205ENST00000525257 GMPPAQ96IJ6 420 aaPredicted RBP21.46■■□□□ 1.03
USP47-205ENST00000525257 LMF2Q9BU23 707 aaKnown RBP21.46■■□□□ 1.03
USP47-205ENST00000525257 ZNF701Q9NV72 531 aaPredicted RBP21.46■■□□□ 1.03
USP47-205ENST00000525257 SIRT5Q9NXA8 310 aa21.46■■□□□ 1.03
USP47-205ENST00000525257 GRID1Q9ULK0 1009 aa21.46■■□□□ 1.03
USP47-205ENST00000525257 STK38LQ9Y2H1 464 aa21.46■■□□□ 1.03
USP47-205ENST00000525257 SONP18583 2426 aaKnown RBP21.45■■□□□ 1.02
USP47-205ENST00000525257 IGLV3-32A0A0A0MS00 114 aa21.45■■□□□ 1.02
USP47-205ENST00000525257 GXYLT2A0PJZ3 443 aa21.45■■□□□ 1.02
USP47-205ENST00000525257 CCDC151A5D8V7 595 aa21.45■■□□□ 1.02
USP47-205ENST00000525257 IGKV1D-16P01601 117 aa21.45■■□□□ 1.02
USP47-205ENST00000525257 ATP5F1P24539 256 aaPredicted RBP21.45■■□□□ 1.02
USP47-205ENST00000525257 GABRA3P34903 492 aa21.45■■□□□ 1.02
USP47-205ENST00000525257 NR1H2P55055 460 aa21.45■■□□□ 1.02
USP47-205ENST00000525257 PKNOX1P55347 436 aa21.45■■□□□ 1.02
USP47-205ENST00000525257 ATP5J2P56134 94 aa21.45■■□□□ 1.02
USP47-205ENST00000525257 CPEB4Q17RY0 729 aaKnown RBP eCLIP21.45■■□□□ 1.02
USP47-205ENST00000525257 FAM71E1Q6IPT2 247 aa21.45■■□□□ 1.02
USP47-205ENST00000525257 OR10D3Q8NH80 312 aa21.45■■□□□ 1.02
USP47-205ENST00000525257 IFT81Q8WYA0 676 aa21.45■■□□□ 1.02
USP47-205ENST00000525257 SLC9A6Q92581 669 aa21.45■■□□□ 1.02
USP47-205ENST00000525257 ELP4Q96EB1 424 aa21.45■■□□□ 1.02
USP47-205ENST00000525257 AMDHD1Q96NU7 426 aa21.45■■□□□ 1.02
USP47-205ENST00000525257 FMO2Q99518 471 aa21.45■■□□□ 1.02
USP47-205ENST00000525257 POLR3HQ9Y535 204 aaPredicted RBP21.45■■□□□ 1.02
USP47-205ENST00000525257 A0A087WUV0 522 aaPredicted RBP21.44■■□□□ 1.02
USP47-205ENST00000525257 HS3ST1O14792 307 aa21.44■■□□□ 1.02
USP47-205ENST00000525257 SS18L1O75177 396 aaPredicted RBP21.44■■□□□ 1.02
USP47-205ENST00000525257 OPN1LWP04000 364 aa21.44■■□□□ 1.02
USP47-205ENST00000525257 PRR5P85299 388 aa21.44■■□□□ 1.02
USP47-205ENST00000525257 PIK3R3Q92569 461 aa21.44■■□□□ 1.02
USP47-205ENST00000525257 ANP32BQ92688 251 aaKnown RBP21.44■■□□□ 1.02
USP47-205ENST00000525257 ACTR6Q9GZN1 396 aa21.44■■□□□ 1.02
USP47-205ENST00000525257 TSPYL1Q9H0U9 437 aa21.44■■□□□ 1.02
USP47-205ENST00000525257 C3orf14Q9HBI5 128 aa21.44■■□□□ 1.02
USP47-205ENST00000525257 MYNNQ9NPC7 610 aa21.44■■□□□ 1.02
USP47-205ENST00000525257 EQTNQ9NQ60 294 aa21.44■■□□□ 1.02
USP47-205ENST00000525257 STOML1Q9UBI4 398 aa21.44■■□□□ 1.02
USP47-205ENST00000525257 MCTS1Q9ULC4 181 aaKnown RBP21.44■■□□□ 1.02
USP47-205ENST00000525257 PRR14LQ5THK1 2151 aa21.44■■□□□ 1.02
USP47-205ENST00000525257 EXOC1LA0A1B0GW35 172 aa21.43■■□□□ 1.02
USP47-205ENST00000525257 KCNH1O95259 989 aa21.43■■□□□ 1.02
USP47-205ENST00000525257 ZNF17P17021 662 aa21.43■■□□□ 1.02
USP47-205ENST00000525257 PRKAA2P54646 552 aa21.43■■□□□ 1.02
USP47-205ENST00000525257 FOXA1P55317 472 aa21.43■■□□□ 1.02
USP47-205ENST00000525257 TNK1Q13470 666 aa21.43■■□□□ 1.02
USP47-205ENST00000525257 IMPG1Q17R60 797 aa21.43■■□□□ 1.02
USP47-205ENST00000525257 ALKBH2Q6NS38 261 aa21.43■■□□□ 1.02
USP47-205ENST00000525257 GALNT10Q86SR1 603 aa21.43■■□□□ 1.02
USP47-205ENST00000525257 SLC22A9Q8IVM8 553 aa21.43■■□□□ 1.02
USP47-205ENST00000525257 WDR75Q8IWA0 830 aaKnown RBP21.43■■□□□ 1.02
USP47-205ENST00000525257 ZNF611Q8N823 705 aa21.43■■□□□ 1.02
USP47-205ENST00000525257 PUM2Q8TB72 1066 aaKnown RBP eCLIP21.43■■□□□ 1.022e-9■■■■■ 34.5
USP47-205ENST00000525257 L3HYPDHQ96EM0 354 aa21.43■■□□□ 1.02
USP47-205ENST00000525257 NPAS1Q99742 590 aa21.43■■□□□ 1.02
USP47-205ENST00000525257 REPIN1Q9BWE0 567 aaKnown RBP21.43■■□□□ 1.02
USP47-205ENST00000525257 MID1IP1Q9NPA3 183 aa21.43■■□□□ 1.02
USP47-205ENST00000525257 TAS2R7Q9NYW3 318 aa21.43■■□□□ 1.02
USP47-205ENST00000525257 STAB1Q9NY15 2570 aa21.43■■□□□ 1.02
USP47-205ENST00000525257 MXRA5Q9NR99 2828 aa21.42■■□□□ 1.02
USP47-205ENST00000525257 SERTM1A2A2V5 107 aa21.42■■□□□ 1.02
USP47-205ENST00000525257 CXCL13O43927 109 aa21.42■■□□□ 1.02
USP47-205ENST00000525257 SYNGR4O95473 234 aa21.42■■□□□ 1.02
USP47-205ENST00000525257 CAPRIN1Q14444 709 aaKnown RBP21.42■■□□□ 1.02
USP47-205ENST00000525257 CTU2Q2VPK5 515 aaKnown RBP21.42■■□□□ 1.02
USP47-205ENST00000525257 BEND4Q6ZU67 534 aa21.42■■□□□ 1.02
USP47-205ENST00000525257 EXOC3L1Q86VI1 746 aa21.42■■□□□ 1.02
USP47-205ENST00000525257 GATSQ8NAP1 163 aa21.42■■□□□ 1.02
USP47-205ENST00000525257 GPR151Q8TDV0 419 aa21.42■■□□□ 1.02
USP47-205ENST00000525257 AKAP1Q92667 903 aaKnown RBP eCLIP21.42■■□□□ 1.02
USP47-205ENST00000525257 ADGRG7Q96K78 797 aa21.42■■□□□ 1.02
USP47-205ENST00000525257 TMEM204Q9BSN7 226 aa21.42■■□□□ 1.02
USP47-205ENST00000525257 GSTO2Q9H4Y5 243 aa21.42■■□□□ 1.02
USP47-205ENST00000525257 C12orf49Q9H741 205 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms