RNA–Protein interactions for RNA: ENST00000523685.5

CTNNA1-239, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-239ENST00000523685 FBXO48Q5FWF7 155 aa4.8□□□□□ -1.64
CTNNA1-239ENST00000523685 SPANXN3Q5MJ09 141 aa4.8□□□□□ -1.64
CTNNA1-239ENST00000523685 RIPPLY2Q5TAB7 128 aa4.8□□□□□ -1.64
CTNNA1-239ENST00000523685 TMEM198Q66K66 360 aa4.8□□□□□ -1.64
CTNNA1-239ENST00000523685 ADNP2Q6IQ32 1131 aa4.8□□□□□ -1.64
CTNNA1-239ENST00000523685 TRIM40Q6P9F5 258 aa4.8□□□□□ -1.64
CTNNA1-239ENST00000523685 CCDC137Q6PK04 289 aaKnown RBP4.8□□□□□ -1.64
CTNNA1-239ENST00000523685 OPN5Q6U736 354 aa4.8□□□□□ -1.64
CTNNA1-239ENST00000523685 SBSNQ6UWP8 590 aa4.8□□□□□ -1.64
CTNNA1-239ENST00000523685 PAMR1Q6UXH9 720 aa4.8□□□□□ -1.64
CTNNA1-239ENST00000523685 TMIGD1Q6UXZ0 262 aa4.8□□□□□ -1.64
CTNNA1-239ENST00000523685 OR4N5Q8IXE1 308 aa4.8□□□□□ -1.64
CTNNA1-239ENST00000523685 ZNF595Q8IYB9 648 aa4.8□□□□□ -1.64
CTNNA1-239ENST00000523685 NKAPQ8N5F7 415 aaKnown RBP4.8□□□□□ -1.64
CTNNA1-239ENST00000523685 NAT8LQ8N9F0 302 aa4.8□□□□□ -1.64
CTNNA1-239ENST00000523685 SNX31Q8N9S9 440 aa4.8□□□□□ -1.64
CTNNA1-239ENST00000523685 RELL2Q8NC24 303 aaPredicted RBP4.8□□□□□ -1.64
CTNNA1-239ENST00000523685 MORN4Q8NDC4 146 aa4.8□□□□□ -1.64
CTNNA1-239ENST00000523685 TNIP2Q8NFZ5 429 aa4.8□□□□□ -1.64
CTNNA1-239ENST00000523685 OR5L2Q8NGL0 311 aa4.8□□□□□ -1.64
CTNNA1-239ENST00000523685 OR14A16Q8NHC5 309 aa4.8□□□□□ -1.64
CTNNA1-239ENST00000523685 LINC01560Q8TB33 94 aa4.8□□□□□ -1.64
CTNNA1-239ENST00000523685 PTPMT1Q8WUK0 201 aaPredicted RBP4.8□□□□□ -1.64
CTNNA1-239ENST00000523685 PPWD1Q96BP3 646 aaKnown RBP4.8□□□□□ -1.64
CTNNA1-239ENST00000523685 CTHRC1Q96CG8 243 aa4.8□□□□□ -1.64
CTNNA1-239ENST00000523685 MS4A6EQ96DS6 147 aa4.8□□□□□ -1.64
CTNNA1-239ENST00000523685 TRIM44Q96DX7 344 aaPredicted RBP4.8□□□□□ -1.64
CTNNA1-239ENST00000523685 CERS2Q96G23 380 aa4.8□□□□□ -1.64
CTNNA1-239ENST00000523685 F2RL3Q96RI0 385 aa4.8□□□□□ -1.64
CTNNA1-239ENST00000523685 GAL3ST4Q96RP7 486 aa4.8□□□□□ -1.64
CTNNA1-239ENST00000523685 PRR25Q96S07 402 aa4.8□□□□□ -1.64
CTNNA1-239ENST00000523685 SERINC2Q96SA4 455 aa4.8□□□□□ -1.64
CTNNA1-239ENST00000523685 NPLQ9BXD5 320 aaPredicted RBP4.8□□□□□ -1.64
CTNNA1-239ENST00000523685 DUSP22Q9NRW4 184 aa4.8□□□□□ -1.64
CTNNA1-239ENST00000523685 B4GALT7Q9UBV7 327 aa4.8□□□□□ -1.64
CTNNA1-239ENST00000523685 COPS7AQ9UBW8 275 aa4.8□□□□□ -1.64
CTNNA1-239ENST00000523685 PPIEQ9UNP9 301 aaKnown RBP4.8□□□□□ -1.64
CTNNA1-239ENST00000523685 RPH3AQ9Y2J0 694 aaPredicted RBP4.8□□□□□ -1.64
CTNNA1-239ENST00000523685 ATG4BQ9Y4P1 393 aa4.8□□□□□ -1.64
CTNNA1-239ENST00000523685 CLDN16Q9Y5I7 305 aa4.8□□□□□ -1.64
CTNNA1-239ENST00000523685 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.8□□□□□ -1.64
CTNNA1-239ENST00000523685 ZNF407Q9C0G0 2248 aa4.8□□□□□ -1.64
CTNNA1-239ENST00000523685 NIPBLQ6KC79 2804 aaeCLIP4.79□□□□□ -1.642e-7■■■■□ 20.4
CTNNA1-239ENST00000523685 HCFC1P51610 2035 aa4.79□□□□□ -1.64
CTNNA1-239ENST00000523685 DNAJC13O75165 2243 aa4.79□□□□□ -1.64
CTNNA1-239ENST00000523685 A0A087X1B8 175 aa4.79□□□□□ -1.64
CTNNA1-239ENST00000523685 TUBAL3A6NHL2 446 aa4.79□□□□□ -1.64
CTNNA1-239ENST00000523685 EEF1E1-BLOC1S5C9J1V9 151 aa4.79□□□□□ -1.64
CTNNA1-239ENST00000523685 J3KTA2 159 aa4.79□□□□□ -1.64
CTNNA1-239ENST00000523685 SAP18O00422 153 aaKnown RBP4.79□□□□□ -1.64
CTNNA1-239ENST00000523685 RTCAO00442 366 aaKnown RBP4.79□□□□□ -1.64
CTNNA1-239ENST00000523685 CYR61O00622 381 aa4.79□□□□□ -1.64
CTNNA1-239ENST00000523685 CES2O00748 559 aa4.79□□□□□ -1.64
CTNNA1-239ENST00000523685 DYNC1I1O14576 645 aa4.79□□□□□ -1.64
CTNNA1-239ENST00000523685 EEF1E1O43324 174 aaKnown RBP4.79□□□□□ -1.64
CTNNA1-239ENST00000523685 SPRY2O43597 315 aa4.79□□□□□ -1.64
CTNNA1-239ENST00000523685 HCN1O60741 890 aa4.79□□□□□ -1.64
CTNNA1-239ENST00000523685 TNFRSF6BO95407 300 aa4.79□□□□□ -1.64
CTNNA1-239ENST00000523685 ETHE1O95571 254 aa4.79□□□□□ -1.64
CTNNA1-239ENST00000523685 TTC4O95801 387 aa4.79□□□□□ -1.64
CTNNA1-239ENST00000523685 TMEM225BP0DP42 221 aa4.79□□□□□ -1.64
CTNNA1-239ENST00000523685 PCNAP12004 261 aa4.79□□□□□ -1.64
CTNNA1-239ENST00000523685 COX7A2P14406 83 aa4.79□□□□□ -1.64
CTNNA1-239ENST00000523685 GABRA1P14867 456 aa4.79□□□□□ -1.64
CTNNA1-239ENST00000523685 GNAZP19086 355 aa4.79□□□□□ -1.64
CTNNA1-239ENST00000523685 CPN2P22792 545 aa4.79□□□□□ -1.64
CTNNA1-239ENST00000523685 GDF1P27539 372 aa4.79□□□□□ -1.64
CTNNA1-239ENST00000523685 MSH2P43246 934 aa4.79□□□□□ -1.64
CTNNA1-239ENST00000523685 ASCL1P50553 236 aa4.79□□□□□ -1.64
CTNNA1-239ENST00000523685 ALDH18A1P54886 795 aaKnown RBP4.79□□□□□ -1.64
CTNNA1-239ENST00000523685 EEFSECP57772 596 aaKnown RBP4.79□□□□□ -1.64
CTNNA1-239ENST00000523685 TGM3Q08188 693 aa4.79□□□□□ -1.64
CTNNA1-239ENST00000523685 FOXO1Q12778 655 aa4.79□□□□□ -1.64
CTNNA1-239ENST00000523685 FHL2Q14192 279 aa4.79□□□□□ -1.64
CTNNA1-239ENST00000523685 EFTUD2Q15029 972 aaKnown RBP eCLIP4.79□□□□□ -1.64
CTNNA1-239ENST00000523685 TOMM20Q15388 145 aa4.79□□□□□ -1.64
CTNNA1-239ENST00000523685 TSNQ15631 228 aaKnown RBP4.79□□□□□ -1.64
CTNNA1-239ENST00000523685 PPP1R3AQ16821 1122 aa4.79□□□□□ -1.64
CTNNA1-239ENST00000523685 DEFB113Q30KQ7 82 aa4.79□□□□□ -1.64
CTNNA1-239ENST00000523685 PIGGQ5H8A4 983 aa4.79□□□□□ -1.64
CTNNA1-239ENST00000523685 SLC22A10Q63ZE4 541 aa4.79□□□□□ -1.64
CTNNA1-239ENST00000523685 FAM45BPQ6NSW5 357 aa4.79□□□□□ -1.64
CTNNA1-239ENST00000523685 TMEM64Q6YI46 380 aa4.79□□□□□ -1.64
CTNNA1-239ENST00000523685 BIVMQ86UB2 503 aa4.79□□□□□ -1.64
CTNNA1-239ENST00000523685 FBXW8Q8N3Y1 598 aa4.79□□□□□ -1.64
CTNNA1-239ENST00000523685 SPATA6LQ8N4H0 392 aa4.79□□□□□ -1.64
CTNNA1-239ENST00000523685 ANKRD42Q8N9B4 389 aa4.79□□□□□ -1.64
CTNNA1-239ENST00000523685 NAXEQ8NCW5 288 aa4.79□□□□□ -1.64
CTNNA1-239ENST00000523685 TRIM58Q8NG06 486 aa4.79□□□□□ -1.64
CTNNA1-239ENST00000523685 TTLQ8NG68 377 aa4.79□□□□□ -1.64
CTNNA1-239ENST00000523685 OR2L5Q8NG80 312 aa4.79□□□□□ -1.64
CTNNA1-239ENST00000523685 OR10G3Q8NGC4 313 aa4.79□□□□□ -1.64
CTNNA1-239ENST00000523685 SLC22A8Q8TCC7 542 aa4.79□□□□□ -1.64
CTNNA1-239ENST00000523685 FAM45AQ8TCE6 357 aa4.79□□□□□ -1.64
CTNNA1-239ENST00000523685 FAM222BQ8WU58 562 aa4.79□□□□□ -1.64
CTNNA1-239ENST00000523685 EXT2Q93063 718 aa4.79□□□□□ -1.64
CTNNA1-239ENST00000523685 RNASE6Q93091 150 aaKnown RBP4.79□□□□□ -1.64
CTNNA1-239ENST00000523685 ESAMQ96AP7 390 aa4.79□□□□□ -1.64
CTNNA1-239ENST00000523685 C18orf12Q96KH6 178 aa4.79□□□□□ -1.64
CTNNA1-239ENST00000523685 QRFPRQ96P65 431 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms