RNA–Protein interactions for RNA: ENST00000522843.5

SDCBP-210, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-210ENST00000522843 C17orf64Q86WR6 236 aa5.95□□□□□ -1.46
SDCBP-210ENST00000522843 CNTN4Q8IWV2 1026 aa5.95□□□□□ -1.46
SDCBP-210ENST00000522843 LMNTD2Q8IXW0 634 aa5.95□□□□□ -1.46
SDCBP-210ENST00000522843 MPP5Q8N3R9 675 aa5.95□□□□□ -1.46
SDCBP-210ENST00000522843 TMEM132CQ8N3T6 1108 aa5.95□□□□□ -1.46
SDCBP-210ENST00000522843 ARFGAP2Q8N6H7 521 aa5.95□□□□□ -1.46
SDCBP-210ENST00000522843 FAM47BQ8NA70 645 aa5.95□□□□□ -1.46
SDCBP-210ENST00000522843 ABTB1Q969K4 478 aaPredicted RBP5.95□□□□□ -1.46
SDCBP-210ENST00000522843 CTHRC1Q96CG8 243 aa5.95□□□□□ -1.46
SDCBP-210ENST00000522843 ZFP3Q96NJ6 502 aa5.95□□□□□ -1.46
SDCBP-210ENST00000522843 MNTQ99583 582 aa5.95□□□□□ -1.46
SDCBP-210ENST00000522843 DOHHQ9BU89 302 aa5.95□□□□□ -1.46
SDCBP-210ENST00000522843 EMC7Q9NPA0 242 aa5.95□□□□□ -1.46
SDCBP-210ENST00000522843 LPAR3Q9UBY5 353 aa5.95□□□□□ -1.46
SDCBP-210ENST00000522843 CRYL1Q9Y2S2 319 aa5.95□□□□□ -1.46
SDCBP-210ENST00000522843 C15orf41Q9Y2V0 281 aa5.95□□□□□ -1.46
SDCBP-210ENST00000522843 CLCA3PQ9Y6N3 262 aa5.95□□□□□ -1.46
SDCBP-210ENST00000522843 CADP27708 2225 aa5.95□□□□□ -1.46
SDCBP-210ENST00000522843 EXOC1LA0A1B0GW35 172 aa5.94□□□□□ -1.46
SDCBP-210ENST00000522843 FRG2CA6NGY1 282 aa5.94□□□□□ -1.46
SDCBP-210ENST00000522843 C17orf105B2RV13 164 aa5.94□□□□□ -1.46
SDCBP-210ENST00000522843 RGS16O15492 202 aaPredicted RBP5.94□□□□□ -1.46
SDCBP-210ENST00000522843 TPD52L2O43399 206 aaKnown RBP5.94□□□□□ -1.46
SDCBP-210ENST00000522843 OR10H2O60403 315 aa5.94□□□□□ -1.46
SDCBP-210ENST00000522843 LY86O95711 162 aa5.94□□□□□ -1.46
SDCBP-210ENST00000522843 TBX6O95947 436 aaPredicted RBP5.94□□□□□ -1.46
SDCBP-210ENST00000522843 CGAP01215 116 aa5.94□□□□□ -1.46
SDCBP-210ENST00000522843 IGKV3-11P04433 115 aa5.94□□□□□ -1.46
SDCBP-210ENST00000522843 MPC1LP0DKB6 136 aa5.94□□□□□ -1.46
SDCBP-210ENST00000522843 IGHV4-31P0DP07 118 aa5.94□□□□□ -1.46
SDCBP-210ENST00000522843 CYP4B1P13584 511 aa5.94□□□□□ -1.46
SDCBP-210ENST00000522843 CPN1P15169 458 aa5.94□□□□□ -1.46
SDCBP-210ENST00000522843 SRD5A1P18405 259 aa5.94□□□□□ -1.46
SDCBP-210ENST00000522843 MGAT1P26572 445 aa5.94□□□□□ -1.46
SDCBP-210ENST00000522843 MSH2P43246 934 aa5.94□□□□□ -1.46
SDCBP-210ENST00000522843 SERPINB9P50453 376 aa5.94□□□□□ -1.46
SDCBP-210ENST00000522843 DIO3P55073 304 aa5.94□□□□□ -1.46
SDCBP-210ENST00000522843 RAB38P57729 211 aa5.94□□□□□ -1.46
SDCBP-210ENST00000522843 KRTAP10-11P60412 298 aa5.94□□□□□ -1.46
SDCBP-210ENST00000522843 BTN3A2P78410 334 aa5.94□□□□□ -1.46
SDCBP-210ENST00000522843 VLDLRP98155 873 aa5.94□□□□□ -1.46
SDCBP-210ENST00000522843 SLC18A2Q05940 514 aa5.94□□□□□ -1.46
SDCBP-210ENST00000522843 MGAT5Q09328 741 aa5.94□□□□□ -1.46
SDCBP-210ENST00000522843 SLC13A2Q13183 592 aa5.94□□□□□ -1.46
SDCBP-210ENST00000522843 NAE1Q13564 534 aa5.94□□□□□ -1.46
SDCBP-210ENST00000522843 CRYMQ14894 314 aa5.94□□□□□ -1.46
SDCBP-210ENST00000522843 SF3B4Q15427 424 aaKnown RBP eCLIP5.94□□□□□ -1.466e-7■■■■■ 30.8
SDCBP-210ENST00000522843 KRT71Q3SY84 523 aa5.94□□□□□ -1.46
SDCBP-210ENST00000522843 NIPAL1Q6NVV3 410 aa5.94□□□□□ -1.46
SDCBP-210ENST00000522843 ZNF549Q6P9A3 640 aa5.94□□□□□ -1.46
SDCBP-210ENST00000522843 AGTRAPQ6RW13 159 aa5.94□□□□□ -1.46
SDCBP-210ENST00000522843 SBSNQ6UWP8 590 aa5.94□□□□□ -1.46
SDCBP-210ENST00000522843 TMEM64Q6YI46 380 aa5.94□□□□□ -1.46
SDCBP-210ENST00000522843 YRDCQ86U90 279 aaKnown RBP5.94□□□□□ -1.46
SDCBP-210ENST00000522843 TRABD2AQ86V40 505 aa5.94□□□□□ -1.46
SDCBP-210ENST00000522843 EXOC3L1Q86VI1 746 aa5.94□□□□□ -1.46
SDCBP-210ENST00000522843 CDYL2Q8N8U2 506 aa5.94□□□□□ -1.46
SDCBP-210ENST00000522843 ZNF610Q8N9Z0 462 aa5.94□□□□□ -1.46
SDCBP-210ENST00000522843 OR14A16Q8NHC5 309 aa5.94□□□□□ -1.46
SDCBP-210ENST00000522843 NUBPLQ8TB37 319 aa5.94□□□□□ -1.46
SDCBP-210ENST00000522843 RAB3IL1Q8TBN0 382 aa5.94□□□□□ -1.46
SDCBP-210ENST00000522843 DOK4Q8TEW6 326 aa5.94□□□□□ -1.46
SDCBP-210ENST00000522843 DCAKDQ8WVC6 231 aa5.94□□□□□ -1.46
SDCBP-210ENST00000522843 AKAP1Q92667 903 aaKnown RBP eCLIP5.94□□□□□ -1.46
SDCBP-210ENST00000522843 NEUROG1Q92886 237 aa5.94□□□□□ -1.46
SDCBP-210ENST00000522843 MTBPQ96DY7 904 aa5.94□□□□□ -1.46
SDCBP-210ENST00000522843 ZNF597Q96LX8 424 aa5.94□□□□□ -1.46
SDCBP-210ENST00000522843 QRFPRQ96P65 431 aa5.94□□□□□ -1.46
SDCBP-210ENST00000522843 FAM111AQ96PZ2 611 aa5.94□□□□□ -1.46
SDCBP-210ENST00000522843 TNFRSF13CQ96RJ3 184 aa5.94□□□□□ -1.46
SDCBP-210ENST00000522843 MLST8Q9BVC4 326 aa5.94□□□□□ -1.46
SDCBP-210ENST00000522843 ALOXE3Q9BYJ1 711 aa5.94□□□□□ -1.46
SDCBP-210ENST00000522843 SHARPINQ9H0F6 387 aa5.94□□□□□ -1.46
SDCBP-210ENST00000522843 PCBD2Q9H0N5 130 aa5.94□□□□□ -1.46
SDCBP-210ENST00000522843 CNOT10Q9H9A5 744 aaKnown RBP5.94□□□□□ -1.46
SDCBP-210ENST00000522843 NSMCE4AQ9NXX6 385 aa5.94□□□□□ -1.46
SDCBP-210ENST00000522843 CNIH4Q9P003 139 aa5.94□□□□□ -1.46
SDCBP-210ENST00000522843 PSMC3IPQ9P2W1 217 aaPredicted RBP5.94□□□□□ -1.46
SDCBP-210ENST00000522843 HEY2Q9UBP5 337 aa5.94□□□□□ -1.46
SDCBP-210ENST00000522843 CHMP2BQ9UQN3 213 aa5.94□□□□□ -1.46
SDCBP-210ENST00000522843 PDE10AQ9Y233 779 aa5.94□□□□□ -1.46
SDCBP-210ENST00000522843 MAGED1Q9Y5V3 778 aaPredicted RBP5.94□□□□□ -1.46
SDCBP-210ENST00000522843 IQANK1A0A1B0GTG1 560 aa5.93□□□□□ -1.46
SDCBP-210ENST00000522843 C16orf97H3BN30 126 aa5.93□□□□□ -1.46
SDCBP-210ENST00000522843 EIF3FO00303 357 aaPredicted RBP5.93□□□□□ -1.46
SDCBP-210ENST00000522843 HCRTR2O43614 444 aa5.93□□□□□ -1.46
SDCBP-210ENST00000522843 ZBTB14O43829 449 aa5.93□□□□□ -1.46
SDCBP-210ENST00000522843 SHOX2O60902 331 aaPredicted RBP5.93□□□□□ -1.46
SDCBP-210ENST00000522843 CTNSO60931 367 aa5.93□□□□□ -1.46
SDCBP-210ENST00000522843 BANF1O75531 89 aa5.93□□□□□ -1.46
SDCBP-210ENST00000522843 SCGB1D2O95969 90 aa5.93□□□□□ -1.46
SDCBP-210ENST00000522843 CD8AP01732 235 aa5.93□□□□□ -1.46
SDCBP-210ENST00000522843 IFNA16P05015 189 aa5.93□□□□□ -1.46
SDCBP-210ENST00000522843 SNRPAP09012 282 aaKnown RBP5.93□□□□□ -1.46
SDCBP-210ENST00000522843 POU2F1P14859 743 aa5.93□□□□□ -1.46
SDCBP-210ENST00000522843 PTPN6P29350 595 aa5.93□□□□□ -1.46
SDCBP-210ENST00000522843 HNRNPH1P31943 449 aaKnown RBP5.93□□□□□ -1.46
SDCBP-210ENST00000522843 AHRP35869 848 aa5.93□□□□□ -1.46
SDCBP-210ENST00000522843 GNALP38405 381 aa5.93□□□□□ -1.46
SDCBP-210ENST00000522843 SLC6A12P48065 614 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms