RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 GM2AP17900 193 aa3.57□□□□□ -1.84
SKP1-209ENST00000522552 CD40LGP29965 261 aa3.57□□□□□ -1.84
SKP1-209ENST00000522552 CSNK1G2P78368 415 aa3.57□□□□□ -1.84
SKP1-209ENST00000522552 CYLC2Q14093 348 aaPredicted RBP3.57□□□□□ -1.84
SKP1-209ENST00000522552 GRB14Q14449 540 aa3.57□□□□□ -1.84
SKP1-209ENST00000522552 ATXN7L3Q14CW9 347 aaPredicted RBP3.57□□□□□ -1.84
SKP1-209ENST00000522552 FAM74A3Q4VXF1 159 aa3.57□□□□□ -1.84
SKP1-209ENST00000522552 FNDC7Q5VTL7 733 aa3.57□□□□□ -1.84
SKP1-209ENST00000522552 STEAP1BQ6NZ63 245 aa3.57□□□□□ -1.84
SKP1-209ENST00000522552 LEG1Q6P5S2 330 aa3.57□□□□□ -1.84
SKP1-209ENST00000522552 GCNT7Q6ZNI0 430 aa3.57□□□□□ -1.84
SKP1-209ENST00000522552 Q6ZRG5 221 aa3.57□□□□□ -1.84
SKP1-209ENST00000522552 Q6ZSV7 163 aa3.57□□□□□ -1.84
SKP1-209ENST00000522552 LANCL3Q6ZV70 420 aa3.57□□□□□ -1.84
SKP1-209ENST00000522552 GPRIN3Q6ZVF9 776 aa3.57□□□□□ -1.84
SKP1-209ENST00000522552 TTLL10Q6ZVT0 673 aa3.57□□□□□ -1.84
SKP1-209ENST00000522552 LRRC6Q86X45 466 aa3.57□□□□□ -1.84
SKP1-209ENST00000522552 CATSPERDQ86XM0 798 aa3.57□□□□□ -1.84
SKP1-209ENST00000522552 ERI1Q8IV48 349 aaKnown RBP3.57□□□□□ -1.84
SKP1-209ENST00000522552 CMTM8Q8IZV2 173 aa3.57□□□□□ -1.84
SKP1-209ENST00000522552 PELI3Q8N2H9 469 aa3.57□□□□□ -1.84
SKP1-209ENST00000522552 ELMOD1Q8N336 334 aa3.57□□□□□ -1.84
SKP1-209ENST00000522552 CLIP4Q8N3C7 705 aa3.57□□□□□ -1.84
SKP1-209ENST00000522552 FBXO36Q8NEA4 188 aa3.57□□□□□ -1.84
SKP1-209ENST00000522552 OR52N5Q8NH56 324 aa3.57□□□□□ -1.84
SKP1-209ENST00000522552 MAGEC3Q8TD91 643 aa3.57□□□□□ -1.84
SKP1-209ENST00000522552 ZNF473Q8WTR7 871 aaKnown RBP3.57□□□□□ -1.84
SKP1-209ENST00000522552 PHLDA1Q8WV24 401 aaPredicted RBP3.57□□□□□ -1.84
SKP1-209ENST00000522552 GLT1D1Q96MS3 346 aa3.57□□□□□ -1.84
SKP1-209ENST00000522552 MBOAT4Q96T53 435 aa3.57□□□□□ -1.84
SKP1-209ENST00000522552 CSF3RQ99062 836 aa3.57□□□□□ -1.84
SKP1-209ENST00000522552 FAM49AQ9H0Q0 323 aaPredicted RBP3.57□□□□□ -1.84
SKP1-209ENST00000522552 ANKRD19PQ9H560 264 aa3.57□□□□□ -1.84
SKP1-209ENST00000522552 IKZF5Q9H5V7 419 aa3.57□□□□□ -1.84
SKP1-209ENST00000522552 PELI2Q9HAT8 420 aa3.57□□□□□ -1.84
SKP1-209ENST00000522552 SLC25A19Q9HC21 320 aa3.57□□□□□ -1.84
SKP1-209ENST00000522552 S100A14Q9HCY8 104 aa3.57□□□□□ -1.84
SKP1-209ENST00000522552 FGF21Q9NSA1 209 aa3.57□□□□□ -1.84
SKP1-209ENST00000522552 ASB6Q9NWX5 421 aa3.57□□□□□ -1.84
SKP1-209ENST00000522552 CLEC5AQ9NY25 188 aa3.57□□□□□ -1.84
SKP1-209ENST00000522552 POLKQ9UBT6 870 aa3.57□□□□□ -1.84
SKP1-209ENST00000522552 NPIPA1Q9UND3 350 aa3.57□□□□□ -1.84
SKP1-209ENST00000522552 CNTNAP2Q9UHC6 1331 aa3.57□□□□□ -1.84
SKP1-209ENST00000522552 RPAP1Q9BWH6 1393 aaPredicted RBP3.56□□□□□ -1.84
SKP1-209ENST00000522552 C1orf232A0A0U1RR37 186 aa3.56□□□□□ -1.84
SKP1-209ENST00000522552 ZCWPW2A0A1B0GU75 182 aa3.56□□□□□ -1.84
SKP1-209ENST00000522552 CCT8L1PA6NM43 557 aa3.56□□□□□ -1.84
SKP1-209ENST00000522552 A8MUA0 341 aa3.56□□□□□ -1.84
SKP1-209ENST00000522552 A8MVM7 634 aa3.56□□□□□ -1.84
SKP1-209ENST00000522552 CCSO14618 274 aa3.56□□□□□ -1.84
SKP1-209ENST00000522552 TAPBPO15533 448 aa3.56□□□□□ -1.84
SKP1-209ENST00000522552 RAMP3O60896 148 aa3.56□□□□□ -1.84
SKP1-209ENST00000522552 TOXO94900 526 aa3.56□□□□□ -1.84
SKP1-209ENST00000522552 DIRAS1O95057 198 aa3.56□□□□□ -1.84
SKP1-209ENST00000522552 CA1P00915 261 aaPredicted RBP3.56□□□□□ -1.84
SKP1-209ENST00000522552 FCER2P06734 321 aa3.56□□□□□ -1.84
SKP1-209ENST00000522552 MBL2P11226 248 aaPredicted RBP3.56□□□□□ -1.84
SKP1-209ENST00000522552 AOC1P19801 751 aa3.56□□□□□ -1.84
SKP1-209ENST00000522552 KITLGP21583 273 aa3.56□□□□□ -1.84
SKP1-209ENST00000522552 ACRV1P26436 265 aa3.56□□□□□ -1.84
SKP1-209ENST00000522552 CD82P27701 267 aa3.56□□□□□ -1.84
SKP1-209ENST00000522552 EVI2BP34910 448 aa3.56□□□□□ -1.84
SKP1-209ENST00000522552 CFHR2P36980 270 aa3.56□□□□□ -1.84
SKP1-209ENST00000522552 SLC1A2P43004 574 aa3.56□□□□□ -1.84
SKP1-209ENST00000522552 BRCC3P46736 316 aa3.56□□□□□ -1.84
SKP1-209ENST00000522552 ART1P52961 327 aa3.56□□□□□ -1.84
SKP1-209ENST00000522552 HMGCS2P54868 508 aa3.56□□□□□ -1.84
SKP1-209ENST00000522552 CLDN18P56856 261 aa3.56□□□□□ -1.84
SKP1-209ENST00000522552 STX17P56962 302 aa3.56□□□□□ -1.84
SKP1-209ENST00000522552 ZXDAP98168 799 aa3.56□□□□□ -1.84
SKP1-209ENST00000522552 CDKL1Q00532 357 aa3.56□□□□□ -1.84
SKP1-209ENST00000522552 RAD51Q06609 339 aa3.56□□□□□ -1.84
SKP1-209ENST00000522552 STX3Q13277 289 aa3.56□□□□□ -1.84
SKP1-209ENST00000522552 PMS2P3Q13401 168 aa3.56□□□□□ -1.84
SKP1-209ENST00000522552 SNAI3Q3KNW1 292 aa3.56□□□□□ -1.84
SKP1-209ENST00000522552 TMEM35AQ53FP2 167 aa3.56□□□□□ -1.84
SKP1-209ENST00000522552 TCHHL1Q5QJ38 904 aaPredicted RBP3.56□□□□□ -1.84
SKP1-209ENST00000522552 BEND6Q5SZJ8 279 aaPredicted RBP3.56□□□□□ -1.84
SKP1-209ENST00000522552 DCAF12Q5T6F0 453 aa3.56□□□□□ -1.84
SKP1-209ENST00000522552 TYW3Q6IPR3 259 aaKnown RBP3.56□□□□□ -1.84
SKP1-209ENST00000522552 TCEAL6Q6IPX3 200 aa3.56□□□□□ -1.84
SKP1-209ENST00000522552 SASS6Q6UVJ0 657 aa3.56□□□□□ -1.84
SKP1-209ENST00000522552 RFPL4BQ6ZWI9 263 aa3.56□□□□□ -1.84
SKP1-209ENST00000522552 Q71RC1 249 aaPredicted RBP3.56□□□□□ -1.84
SKP1-209ENST00000522552 GLCCI1Q86VQ1 547 aa3.56□□□□□ -1.84
SKP1-209ENST00000522552 RANBP3LQ86VV4 465 aaPredicted RBP3.56□□□□□ -1.84
SKP1-209ENST00000522552 PLCZ1Q86YW0 608 aa3.56□□□□□ -1.84
SKP1-209ENST00000522552 LRRC75AQ8NAA5 344 aa3.56□□□□□ -1.84
SKP1-209ENST00000522552 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.56□□□□□ -1.84
SKP1-209ENST00000522552 TMEM174Q8WUU8 243 aa3.56□□□□□ -1.84
SKP1-209ENST00000522552 SMG7Q92540 1137 aaKnown RBP3.56□□□□□ -1.84
SKP1-209ENST00000522552 KIFAP3Q92845 792 aa3.56□□□□□ -1.84
SKP1-209ENST00000522552 BADQ92934 168 aa3.56□□□□□ -1.84
SKP1-209ENST00000522552 SLC47A1Q96FL8 570 aa3.56□□□□□ -1.84
SKP1-209ENST00000522552 C4orf45Q96LM5 186 aa3.56□□□□□ -1.84
SKP1-209ENST00000522552 SEMA4CQ9C0C4 833 aa3.56□□□□□ -1.84
SKP1-209ENST00000522552 OR2B2Q9GZK3 357 aa3.56□□□□□ -1.84
SKP1-209ENST00000522552 EBF3Q9H4W6 596 aa3.56□□□□□ -1.84
SKP1-209ENST00000522552 ALG9Q9H6U8 611 aa3.56□□□□□ -1.84
SKP1-209ENST00000522552 ZFP57Q9NU63 452 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms