RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 TCEAL3Q969E4 200 aa15.27■□□□□ 0.04
USP42-207ENST00000521713 INSM2Q96T92 566 aaPredicted RBP15.27■□□□□ 0.04
USP42-207ENST00000521713 PBDC1Q9BVG4 233 aa15.27■□□□□ 0.04
USP42-207ENST00000521713 NT5DC2Q9H857 520 aa15.27■□□□□ 0.04
USP42-207ENST00000521713 NLKQ9UBE8 527 aa15.27■□□□□ 0.04
USP42-207ENST00000521713 KCNN3Q9UGI6 736 aa15.27■□□□□ 0.04
USP42-207ENST00000521713 NAP1L6A6NFF2 107 aa15.27■□□□□ 0.03
USP42-207ENST00000521713 ETV4P43268 484 aa15.27■□□□□ 0.03
USP42-207ENST00000521713 HACD4Q5VWC8 232 aa15.27■□□□□ 0.03
USP42-207ENST00000521713 GLT8D1Q68CQ7 371 aa15.27■□□□□ 0.03
USP42-207ENST00000521713 C22orf42Q6IC83 251 aa15.27■□□□□ 0.03
USP42-207ENST00000521713 MAMDC2Q7Z304 686 aaPredicted RBP15.27■□□□□ 0.03
USP42-207ENST00000521713 GALNT10Q86SR1 603 aa15.27■□□□□ 0.03
USP42-207ENST00000521713 SYNPOQ8N3V7 929 aa15.27■□□□□ 0.03
USP42-207ENST00000521713 JAGN1Q8N5M9 183 aa15.27■□□□□ 0.03
USP42-207ENST00000521713 COQ10AQ96MF6 247 aa15.27■□□□□ 0.03
USP42-207ENST00000521713 ATOH8Q96SQ7 321 aa15.27■□□□□ 0.03
USP42-207ENST00000521713 GAL3ST1Q99999 423 aa15.27■□□□□ 0.03
USP42-207ENST00000521713 DPH2Q9BQC3 489 aaPredicted RBP15.27■□□□□ 0.03
USP42-207ENST00000521713 DHRS4Q9BTZ2 278 aa15.27■□□□□ 0.03
USP42-207ENST00000521713 PCDHGA7Q9Y5G6 932 aa15.27■□□□□ 0.03
USP42-207ENST00000521713 FAM227AF5H4B4 570 aa15.27■□□□□ 0.03
USP42-207ENST00000521713 RNASET2O00584 256 aaKnown RBP15.27■□□□□ 0.03
USP42-207ENST00000521713 HSPA12AO43301 675 aa15.27■□□□□ 0.03
USP42-207ENST00000521713 IFNA2P01563 188 aa15.27■□□□□ 0.03
USP42-207ENST00000521713 IGHEP01854 428 aa15.27■□□□□ 0.03
USP42-207ENST00000521713 CD27P26842 260 aa15.27■□□□□ 0.03
USP42-207ENST00000521713 NR0B1P51843 470 aaKnown RBP15.27■□□□□ 0.03
USP42-207ENST00000521713 CAPZA1P52907 286 aa15.27■□□□□ 0.03
USP42-207ENST00000521713 TMEM69Q5SWH9 247 aa15.27■□□□□ 0.03
USP42-207ENST00000521713 ZNF283Q8N7M2 679 aa15.27■□□□□ 0.03
USP42-207ENST00000521713 OR14K1Q8NGZ2 314 aa15.27■□□□□ 0.03
USP42-207ENST00000521713 CREB3L4Q8TEY5 395 aa15.27■□□□□ 0.03
USP42-207ENST00000521713 TM9SF4Q92544 642 aa15.27■□□□□ 0.03
USP42-207ENST00000521713 NECAB3Q96P71 396 aaPredicted RBP15.27■□□□□ 0.03
USP42-207ENST00000521713 SMIM14Q96QK8 99 aa15.27■□□□□ 0.03
USP42-207ENST00000521713 IL37Q9NZH6 218 aa15.27■□□□□ 0.03
USP42-207ENST00000521713 A0A1B0GVT2 93 aa15.26■□□□□ 0.03
USP42-207ENST00000521713 S1PR1P21453 382 aa15.26■□□□□ 0.03
USP42-207ENST00000521713 GCGRP47871 477 aa15.26■□□□□ 0.03
USP42-207ENST00000521713 RGS19P49795 217 aa15.26■□□□□ 0.03
USP42-207ENST00000521713 SF3A2Q15428 464 aaKnown RBP15.26■□□□□ 0.03
USP42-207ENST00000521713 EXOC3L2Q2M3D2 409 aa15.26■□□□□ 0.03
USP42-207ENST00000521713 DOK4Q8TEW6 326 aa15.26■□□□□ 0.03
USP42-207ENST00000521713 UTP4Q969X6 686 aaKnown RBP15.26■□□□□ 0.03
USP42-207ENST00000521713 CIDECQ96AQ7 238 aaPredicted RBP15.26■□□□□ 0.03
USP42-207ENST00000521713 SLC6A8P48029 635 aa15.26■□□□□ 0.03
USP42-207ENST00000521713 FOXK1P85037 733 aa15.26■□□□□ 0.03
USP42-207ENST00000521713 LAPTM4AQ15012 233 aa15.26■□□□□ 0.03
USP42-207ENST00000521713 CTSL3PQ5NE16 218 aa15.26■□□□□ 0.03
USP42-207ENST00000521713 RSPO2Q6UXX9 243 aaPredicted RBP15.26■□□□□ 0.03
USP42-207ENST00000521713 ZNF534Q76KX8 674 aa15.26■□□□□ 0.03
USP42-207ENST00000521713 BEST3Q8N1M1 668 aa15.26■□□□□ 0.03
USP42-207ENST00000521713 KHSRPQ92945 711 aaKnown RBP eCLIP15.26■□□□□ 0.032e-6■□□□□ 8.4
USP42-207ENST00000521713 C7orf50Q9BRJ6 194 aaKnown RBP15.26■□□□□ 0.03
USP42-207ENST00000521713 BEX1Q9HBH7 125 aa15.26■□□□□ 0.03
USP42-207ENST00000521713 CA5BQ9Y2D0 317 aa15.26■□□□□ 0.03
USP42-207ENST00000521713 NUBP2Q9Y5Y2 271 aa15.26■□□□□ 0.03
USP42-207ENST00000521713 LOC100509620A0A075B734 347 aa15.26■□□□□ 0.03
USP42-207ENST00000521713 SGK494L7N484 410 aa15.26■□□□□ 0.03
USP42-207ENST00000521713 ADAP00813 363 aa15.26■□□□□ 0.03
USP42-207ENST00000521713 EGFP01133 1207 aa15.26■□□□□ 0.03
USP42-207ENST00000521713 ITGA5P08648 1049 aa15.26■□□□□ 0.03
USP42-207ENST00000521713 RBMXP38159 391 aaKnown RBP15.26■□□□□ 0.03
USP42-207ENST00000521713 RPS5P46782 204 aaKnown RBP15.26■□□□□ 0.03
USP42-207ENST00000521713 FGFBP1Q14512 234 aa15.26■□□□□ 0.03
USP42-207ENST00000521713 ALG10BQ5I7T1 473 aa15.26■□□□□ 0.03
USP42-207ENST00000521713 ARHGAP11AQ6P4F7 1023 aa15.26■□□□□ 0.03
USP42-207ENST00000521713 SLC7A5P1Q8MH63 180 aa15.26■□□□□ 0.03
USP42-207ENST00000521713 SYT4Q9H2B2 425 aa15.26■□□□□ 0.03
USP42-207ENST00000521713 NDUFV2P19404 249 aa15.26■□□□□ 0.03
USP42-207ENST00000521713 HIST1H1TP22492 207 aaPredicted RBP15.26■□□□□ 0.03
USP42-207ENST00000521713 INHBCP55103 352 aa15.26■□□□□ 0.03
USP42-207ENST00000521713 SGCAQ16586 387 aa15.26■□□□□ 0.03
USP42-207ENST00000521713 POGLUT1Q8NBL1 392 aa15.26■□□□□ 0.03
USP42-207ENST00000521713 CLEC1AQ8NC01 280 aa15.26■□□□□ 0.03
USP42-207ENST00000521713 OR7G1Q8NGA0 311 aa15.26■□□□□ 0.03
USP42-207ENST00000521713 OR6Q1Q8NGQ2 317 aa15.26■□□□□ 0.03
USP42-207ENST00000521713 LINC01599Q8WXQ3 324 aa15.26■□□□□ 0.03
USP42-207ENST00000521713 WDR77Q9BQA1 342 aaPredicted RBP15.26■□□□□ 0.03
USP42-207ENST00000521713 INTS6Q9UL03 887 aaKnown RBP15.26■□□□□ 0.03
USP42-207ENST00000521713 SARDHQ9UL12 918 aa15.26■□□□□ 0.03
USP42-207ENST00000521713 MMP17Q9ULZ9 603 aa15.26■□□□□ 0.03
USP42-207ENST00000521713 TEX13DA0A0J9YY54 714 aaPredicted RBP15.25■□□□□ 0.03
USP42-207ENST00000521713 ZNF878C9JN71 531 aa15.25■□□□□ 0.03
USP42-207ENST00000521713 CA5AP35218 305 aa15.25■□□□□ 0.03
USP42-207ENST00000521713 NR4A2P43354 598 aa15.25■□□□□ 0.03
USP42-207ENST00000521713 DLX2Q07687 328 aaPredicted RBP15.25■□□□□ 0.03
USP42-207ENST00000521713 KCNJ8Q15842 424 aa15.25■□□□□ 0.03
USP42-207ENST00000521713 METTL11BQ5VVY1 283 aa15.25■□□□□ 0.03
USP42-207ENST00000521713 OR7G2Q8NG99 324 aa15.25■□□□□ 0.03
USP42-207ENST00000521713 PIGBOS1A0A0B4J2F0 54 aa15.25■□□□□ 0.03
USP42-207ENST00000521713 HCKP08631 526 aa15.25■□□□□ 0.03
USP42-207ENST00000521713 SDC1P18827 310 aa15.25■□□□□ 0.03
USP42-207ENST00000521713 FUT4P22083 530 aa15.25■□□□□ 0.03
USP42-207ENST00000521713 UQCRC1P31930 480 aa15.25■□□□□ 0.03
USP42-207ENST00000521713 KCTD9Q7L273 389 aa15.25■□□□□ 0.03
USP42-207ENST00000521713 OR14L1PQ8NHC6 308 aa15.25■□□□□ 0.03
USP42-207ENST00000521713 MFSD8Q8NHS3 518 aa15.25■□□□□ 0.03
USP42-207ENST00000521713 NAALAD2Q9Y3Q0 740 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms