RNA–Protein interactions for RNA: ENST00000519617.1

CCNC-208, Transcript of cyclin C, humanhuman

TSL 3

Gene CCNC, Length 246 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-208ENST00000519617 NT5DC2Q9H857 520 aa1.73□□□□□ -2.13
CCNC-208ENST00000519617 BRF2Q9HAW0 419 aa1.73□□□□□ -2.13
CCNC-208ENST00000519617 CACYBPQ9HB71 228 aaKnown RBP1.73□□□□□ -2.13
CCNC-208ENST00000519617 HHATLQ9HCP6 504 aa1.73□□□□□ -2.13
CCNC-208ENST00000519617 FGF22Q9HCT0 170 aa1.73□□□□□ -2.13
CCNC-208ENST00000519617 SLC40A1Q9NP59 571 aa1.73□□□□□ -2.13
CCNC-208ENST00000519617 MRPL40Q9NQ50 206 aaKnown RBP1.73□□□□□ -2.13
CCNC-208ENST00000519617 PRDM8Q9NQV8 689 aa1.73□□□□□ -2.13
CCNC-208ENST00000519617 MBNL1Q9NR56 388 aaKnown RBP1.73□□□□□ -2.13
CCNC-208ENST00000519617 ABCF3Q9NUQ8 709 aa1.73□□□□□ -2.13
CCNC-208ENST00000519617 GIMAP4Q9NUV9 329 aa1.73□□□□□ -2.13
CCNC-208ENST00000519617 DNAJC11Q9NVH1 559 aa1.73□□□□□ -2.13
CCNC-208ENST00000519617 ATAD3AQ9NVI7 634 aa1.73□□□□□ -2.13
CCNC-208ENST00000519617 HRASLS2Q9NWW9 162 aa1.73□□□□□ -2.13
CCNC-208ENST00000519617 SOHLH2Q9NX45 425 aa1.73□□□□□ -2.13
CCNC-208ENST00000519617 NDE1Q9NXR1 346 aa1.73□□□□□ -2.13
CCNC-208ENST00000519617 PSD3Q9NYI0 1048 aa1.73□□□□□ -2.13
CCNC-208ENST00000519617 OR6C3Q9NZP0 311 aa1.73□□□□□ -2.13
CCNC-208ENST00000519617 OGFRQ9NZT2 677 aa1.73□□□□□ -2.13
CCNC-208ENST00000519617 MARCH4Q9P2E8 410 aaPredicted RBP1.73□□□□□ -2.13
CCNC-208ENST00000519617 COPG2Q9UBF2 871 aa1.73□□□□□ -2.13
CCNC-208ENST00000519617 TBC1D29Q9UFV1 150 aa1.73□□□□□ -2.13
CCNC-208ENST00000519617 NXT1Q9UKK6 140 aaKnown RBP1.73□□□□□ -2.13
CCNC-208ENST00000519617 PCDHGB4Q9UN71 923 aa1.73□□□□□ -2.13
CCNC-208ENST00000519617 PSMD13Q9UNM6 376 aa1.73□□□□□ -2.13
CCNC-208ENST00000519617 PLCL2Q9UPR0 1127 aa1.73□□□□□ -2.13
CCNC-208ENST00000519617 KCNK6Q9Y257 313 aa1.73□□□□□ -2.13
CCNC-208ENST00000519617 EIF3LQ9Y262 564 aaKnown RBP1.73□□□□□ -2.13
CCNC-208ENST00000519617 VDAC3Q9Y277 283 aa1.73□□□□□ -2.13
CCNC-208ENST00000519617 PADI2Q9Y2J8 665 aa1.73□□□□□ -2.13
CCNC-208ENST00000519617 AP3M1Q9Y2T2 418 aa1.73□□□□□ -2.13
CCNC-208ENST00000519617 COL4A2P08572 1712 aa1.73□□□□□ -2.13
CCNC-208ENST00000519617 SZT2Q5T011 3432 aa1.73□□□□□ -2.13
CCNC-208ENST00000519617 XIRP2A4UGR9 3374 aa1.73□□□□□ -2.13
CCNC-208ENST00000519617 PRUNE2Q8WUY3 3088 aa1.72□□□□□ -2.13
CCNC-208ENST00000519617 GON4LQ3T8J9 2241 aa1.72□□□□□ -2.13
CCNC-208ENST00000519617 MUC22E2RYF6 1773 aaPredicted RBP1.72□□□□□ -2.13
CCNC-208ENST00000519617 CACNA1HO95180 2353 aa1.72□□□□□ -2.13
CCNC-208ENST00000519617 C5orf42Q9H799 3197 aa1.72□□□□□ -2.13
CCNC-208ENST00000519617 ATXN2Q99700 1313 aaKnown RBP1.72□□□□□ -2.13
CCNC-208ENST00000519617 PI4KAP42356 2102 aa1.72□□□□□ -2.13
CCNC-208ENST00000519617 CACNA1EQ15878 2313 aa1.72□□□□□ -2.13
CCNC-208ENST00000519617 CUL9Q8IWT3 2517 aa1.72□□□□□ -2.13
CCNC-208ENST00000519617 PLXNA2O75051 1894 aa1.72□□□□□ -2.13
CCNC-208ENST00000519617 ZNF106Q9H2Y7 1883 aaKnown RBP1.72□□□□□ -2.13
CCNC-208ENST00000519617 KCNE1BA0A087WTH5 132 aa1.72□□□□□ -2.13
CCNC-208ENST00000519617 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP1.72□□□□□ -2.13
CCNC-208ENST00000519617 A0A1W2PPM1 405 aa1.72□□□□□ -2.13
CCNC-208ENST00000519617 TRBC2A0A5B9 178 aa1.72□□□□□ -2.13
CCNC-208ENST00000519617 hDV102S1A0JD36 115 aa1.72□□□□□ -2.13
CCNC-208ENST00000519617 LNP1A1A4G5 178 aa1.72□□□□□ -2.13
CCNC-208ENST00000519617 GMNCA6NCL1 334 aa1.72□□□□□ -2.13
CCNC-208ENST00000519617 OR6C74A6NCV1 312 aa1.72□□□□□ -2.13
CCNC-208ENST00000519617 NCF1BA6NI72 391 aaPredicted RBP1.72□□□□□ -2.13
CCNC-208ENST00000519617 SLC9B1P1A6NJY1 282 aa1.72□□□□□ -2.13
CCNC-208ENST00000519617 OR52A4PA6NMU1 304 aa1.72□□□□□ -2.13
CCNC-208ENST00000519617 IQCF5A8MTL0 148 aa1.72□□□□□ -2.13
CCNC-208ENST00000519617 NCF1CA8MVU1 366 aaPredicted RBP1.72□□□□□ -2.13
CCNC-208ENST00000519617 ARHGEF33A8MVX0 844 aa1.72□□□□□ -2.13
CCNC-208ENST00000519617 C9J4A7 227 aa1.72□□□□□ -2.13
CCNC-208ENST00000519617 FAM157AC9JC47 383 aa1.72□□□□□ -2.13
CCNC-208ENST00000519617 E7EQ34 232 aa1.72□□□□□ -2.13
CCNC-208ENST00000519617 H0YIV9 168 aa1.72□□□□□ -2.13
CCNC-208ENST00000519617 GOLGA8RI6L899 631 aa1.72□□□□□ -2.13
CCNC-208ENST00000519617 CDC7O00311 574 aa1.72□□□□□ -2.13
CCNC-208ENST00000519617 FOXE1O00358 373 aaPredicted RBP1.72□□□□□ -2.13
CCNC-208ENST00000519617 GAPDHSO14556 408 aaPredicted RBP1.72□□□□□ -2.13
CCNC-208ENST00000519617 SLC30A4O14863 429 aa1.72□□□□□ -2.13
CCNC-208ENST00000519617 AZIN1O14977 448 aa1.72□□□□□ -2.13
CCNC-208ENST00000519617 POLR1CO15160 346 aaPredicted RBP1.72□□□□□ -2.13
CCNC-208ENST00000519617 SLC22A2O15244 555 aa1.72□□□□□ -2.13
CCNC-208ENST00000519617 POLR3GO15318 223 aaPredicted RBP1.72□□□□□ -2.13
CCNC-208ENST00000519617 HDAC3O15379 428 aa1.72□□□□□ -2.13
CCNC-208ENST00000519617 RRP8O43159 456 aaKnown RBP1.72□□□□□ -2.13
CCNC-208ENST00000519617 TYROBPO43914 113 aa1.72□□□□□ -2.13
CCNC-208ENST00000519617 KLK8O60259 260 aa1.72□□□□□ -2.13
CCNC-208ENST00000519617 PLIN3O60664 434 aa1.72□□□□□ -2.13
CCNC-208ENST00000519617 HNRNPCL1O60812 293 aaKnown RBP1.72□□□□□ -2.13
CCNC-208ENST00000519617 SDC3O75056 442 aa1.72□□□□□ -2.13
CCNC-208ENST00000519617 SPAG7O75391 227 aa1.72□□□□□ -2.13
CCNC-208ENST00000519617 GMNNO75496 209 aa1.72□□□□□ -2.13
CCNC-208ENST00000519617 BANF1O75531 89 aa1.72□□□□□ -2.13
CCNC-208ENST00000519617 TIPRLO75663 272 aa1.72□□□□□ -2.13
CCNC-208ENST00000519617 BCAS2O75934 225 aaPredicted RBP1.72□□□□□ -2.13
CCNC-208ENST00000519617 DCTN3O75935 186 aa1.72□□□□□ -2.13
CCNC-208ENST00000519617 ATP5HO75947 161 aa1.72□□□□□ -2.13
CCNC-208ENST00000519617 OR2B3O76000 313 aa1.72□□□□□ -2.13
CCNC-208ENST00000519617 KIAA0754O94854 1291 aa1.72□□□□□ -2.13
CCNC-208ENST00000519617 SEMA3DO95025 777 aa1.72□□□□□ -2.13
CCNC-208ENST00000519617 SLC16A8O95907 504 aa1.72□□□□□ -2.13
CCNC-208ENST00000519617 SHBGP04278 402 aa1.72□□□□□ -2.13
CCNC-208ENST00000519617 IL6P05231 212 aa1.72□□□□□ -2.13
CCNC-208ENST00000519617 RPLP0P05388 317 aaKnown RBP1.72□□□□□ -2.13
CCNC-208ENST00000519617 SERPINA6P08185 405 aa1.72□□□□□ -2.13
CCNC-208ENST00000519617 FGF4P08620 206 aa1.72□□□□□ -2.13
CCNC-208ENST00000519617 ANKRD34CP0C6C1 535 aa1.72□□□□□ -2.13
CCNC-208ENST00000519617 C1GALT1C1LP0DN25 315 aa1.72□□□□□ -2.13
CCNC-208ENST00000519617 PRPS2P11908 318 aa1.72□□□□□ -2.13
CCNC-208ENST00000519617 PCNAP12004 261 aa1.72□□□□□ -2.13
CCNC-208ENST00000519617 ICAM2P13598 275 aa1.72□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms