RNA–Protein interactions for RNA: ENST00000519540.5

FAM49B-214, Transcript of family with sequence similarity 49 member B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM49B, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-214ENST00000519540 MAP2K4P45985 399 aa17.13■□□□□ 0.33
FAM49B-214ENST00000519540 DECR1Q16698 335 aa17.13■□□□□ 0.33
FAM49B-214ENST00000519540 C12orf73Q69YU5 71 aa17.13■□□□□ 0.33
FAM49B-214ENST00000519540 GUSBP11Q6P575 273 aa17.13■□□□□ 0.33
FAM49B-214ENST00000519540 TMEM71Q6P5X7 295 aa17.13■□□□□ 0.33
FAM49B-214ENST00000519540 ZNF730Q6ZMV8 503 aa17.13■□□□□ 0.33
FAM49B-214ENST00000519540 PTCHD4Q6ZW05 846 aa17.13■□□□□ 0.33
FAM49B-214ENST00000519540 PRICKLE2Q7Z3G6 844 aa17.13■□□□□ 0.33
FAM49B-214ENST00000519540 ERI1Q8IV48 349 aaKnown RBP17.13■□□□□ 0.33
FAM49B-214ENST00000519540 NKAIN4Q8IVV8 208 aa17.13■□□□□ 0.33
FAM49B-214ENST00000519540 ZNF501Q96CX3 271 aaPredicted RBP17.13■□□□□ 0.33
FAM49B-214ENST00000519540 PTCHD1Q96NR3 888 aa17.13■□□□□ 0.33
FAM49B-214ENST00000519540 NAA50Q9GZZ1 169 aaKnown RBP17.13■□□□□ 0.33
FAM49B-214ENST00000519540 OR10A5Q9H207 317 aa17.13■□□□□ 0.33
FAM49B-214ENST00000519540 AMBNQ9NP70 447 aa17.13■□□□□ 0.33
FAM49B-214ENST00000519540 C11orf16Q9NQ32 467 aa17.13■□□□□ 0.33
FAM49B-214ENST00000519540 FKBP14Q9NWM8 211 aa17.13■□□□□ 0.33
FAM49B-214ENST00000519540 U3KQA8 63 aa17.13■□□□□ 0.33
FAM49B-214ENST00000519540 CPED1A4D0V7 1026 aa17.12■□□□□ 0.33
FAM49B-214ENST00000519540 CLCA1A8K7I4 914 aa17.12■□□□□ 0.33
FAM49B-214ENST00000519540 ZNF99A8MXY4 864 aaPredicted RBP17.12■□□□□ 0.33
FAM49B-214ENST00000519540 SIGLEC6O43699 453 aa17.12■□□□□ 0.33
FAM49B-214ENST00000519540 NTN1O95631 604 aa17.12■□□□□ 0.33
FAM49B-214ENST00000519540 IGKV1D-16P01601 117 aa17.12■□□□□ 0.33
FAM49B-214ENST00000519540 PRG2P13727 222 aa17.12■□□□□ 0.33
FAM49B-214ENST00000519540 TNNI3P19429 210 aa17.12■□□□□ 0.33
FAM49B-214ENST00000519540 GSTM3P21266 225 aa17.12■□□□□ 0.33
FAM49B-214ENST00000519540 IFNGR2P38484 337 aa17.12■□□□□ 0.33
FAM49B-214ENST00000519540 RFX3P48380 749 aa17.12■□□□□ 0.33
FAM49B-214ENST00000519540 MASP1P48740 699 aa17.12■□□□□ 0.33
FAM49B-214ENST00000519540 GP2P55259 537 aaKnown RBP17.12■□□□□ 0.33
FAM49B-214ENST00000519540 SQSTM1Q13501 440 aa17.12■□□□□ 0.33
FAM49B-214ENST00000519540 FLYWCH1Q4VC44 716 aa17.12■□□□□ 0.33
FAM49B-214ENST00000519540 NPSR1Q6W5P4 371 aa17.12■□□□□ 0.33
FAM49B-214ENST00000519540 ZNF574Q6ZN55 896 aaPredicted RBP17.12■□□□□ 0.33
FAM49B-214ENST00000519540 TMPRSS9Q7Z410 1059 aa17.12■□□□□ 0.33
FAM49B-214ENST00000519540 RANBP3LQ86VV4 465 aaPredicted RBP17.12■□□□□ 0.33
FAM49B-214ENST00000519540 ZNF615Q8N8J6 731 aa17.12■□□□□ 0.33
FAM49B-214ENST00000519540 C16orf52Q8NHV5 167 aa17.12■□□□□ 0.33
FAM49B-214ENST00000519540 GNPDA2Q8TDQ7 276 aa17.12■□□□□ 0.33
FAM49B-214ENST00000519540 ACOT11Q8WXI4 607 aaPredicted RBP17.12■□□□□ 0.33
FAM49B-214ENST00000519540 GGHQ92820 318 aa17.12■□□□□ 0.33
FAM49B-214ENST00000519540 COPS4Q9BT78 406 aa17.12■□□□□ 0.33
FAM49B-214ENST00000519540 FGF21Q9NSA1 209 aa17.12■□□□□ 0.33
FAM49B-214ENST00000519540 MMACHCQ9Y4U1 282 aa17.12■□□□□ 0.33
FAM49B-214ENST00000519540 H3BMQ9 156 aa17.11■□□□□ 0.33
FAM49B-214ENST00000519540 TOX3O15405 576 aaPredicted RBP17.11■□□□□ 0.33
FAM49B-214ENST00000519540 GKN3PP0CG01 181 aa17.11■□□□□ 0.33
FAM49B-214ENST00000519540 CT45A8P0DMV1 189 aa17.11■□□□□ 0.33
FAM49B-214ENST00000519540 CT45A9P0DMV2 189 aa17.11■□□□□ 0.33
FAM49B-214ENST00000519540 NUDT6P53370 316 aa17.11■□□□□ 0.33
FAM49B-214ENST00000519540 SH3BGRP55822 239 aaPredicted RBP17.11■□□□□ 0.33
FAM49B-214ENST00000519540 DSG2Q14126 1118 aa17.11■□□□□ 0.33
FAM49B-214ENST00000519540 CT45A2Q5DJT8 189 aa17.11■□□□□ 0.33
FAM49B-214ENST00000519540 PERM1Q5SV97 790 aa17.11■□□□□ 0.33
FAM49B-214ENST00000519540 RRM2BQ7LG56 351 aa17.11■□□□□ 0.33
FAM49B-214ENST00000519540 SVOPQ8N4V2 548 aa17.11■□□□□ 0.33
FAM49B-214ENST00000519540 RCBTB1Q8NDN9 531 aa17.11■□□□□ 0.33
FAM49B-214ENST00000519540 TOR1AIP2Q8NFQ8 470 aa17.11■□□□□ 0.33
FAM49B-214ENST00000519540 COG8Q96MW5 612 aa17.11■□□□□ 0.33
FAM49B-214ENST00000519540 ARMC7Q9H6L4 198 aa17.11■□□□□ 0.33
FAM49B-214ENST00000519540 ZNF304Q9HCX3 659 aa17.11■□□□□ 0.33
FAM49B-214ENST00000519540 ATXN7L1Q9ULK2 861 aaPredicted RBP17.11■□□□□ 0.33
FAM49B-214ENST00000519540 DSCR3O14972 297 aa17.11■□□□□ 0.33
FAM49B-214ENST00000519540 CLPSP04118 112 aa17.11■□□□□ 0.33
FAM49B-214ENST00000519540 OMPP47874 163 aa17.11■□□□□ 0.33
FAM49B-214ENST00000519540 RNF144AP50876 292 aaPredicted RBP17.11■□□□□ 0.33
FAM49B-214ENST00000519540 TMBIM6P55061 237 aa17.11■□□□□ 0.33
FAM49B-214ENST00000519540 PEAR1Q5VY43 1037 aaPredicted RBP17.11■□□□□ 0.33
FAM49B-214ENST00000519540 MEX3DQ86XN8 651 aaKnown RBP17.11■□□□□ 0.33
FAM49B-214ENST00000519540 PTPMT1Q8WUK0 201 aaPredicted RBP17.11■□□□□ 0.33
FAM49B-214ENST00000519540 RORBQ92753 470 aa17.11■□□□□ 0.33
FAM49B-214ENST00000519540 MYDGFQ969H8 173 aa17.11■□□□□ 0.33
FAM49B-214ENST00000519540 POLR2J2Q9GZM3 115 aaKnown RBP17.11■□□□□ 0.33
FAM49B-214ENST00000519540 GAREM1Q9H706 876 aa17.11■□□□□ 0.33
FAM49B-214ENST00000519540 Q9N2J8 555 aa17.11■□□□□ 0.33
FAM49B-214ENST00000519540 ACOT13Q9NPJ3 140 aa17.11■□□□□ 0.33
FAM49B-214ENST00000519540 SLC7A7Q9UM01 511 aa17.11■□□□□ 0.33
FAM49B-214ENST00000519540 IGKV3D-11A0A0A0MRZ8 115 aa17.1■□□□□ 0.33
FAM49B-214ENST00000519540 SH3D21A4FU49 640 aa17.1■□□□□ 0.33
FAM49B-214ENST00000519540 C17orf105B2RV13 164 aa17.1■□□□□ 0.33
FAM49B-214ENST00000519540 BCAS1O75363 584 aaPredicted RBP17.1■□□□□ 0.33
FAM49B-214ENST00000519540 CFIP05156 583 aa17.1■□□□□ 0.33
FAM49B-214ENST00000519540 DRD5P21918 477 aa17.1■□□□□ 0.33
FAM49B-214ENST00000519540 ACVR2AP27037 513 aa17.1■□□□□ 0.33
FAM49B-214ENST00000519540 HTR2AP28223 471 aa17.1■□□□□ 0.33
FAM49B-214ENST00000519540 SNRPGP62308 76 aaKnown RBP17.1■□□□□ 0.33
FAM49B-214ENST00000519540 PLAURQ03405 335 aa17.1■□□□□ 0.33
FAM49B-214ENST00000519540 MVKQ03426 396 aa17.1■□□□□ 0.33
FAM49B-214ENST00000519540 TSPAN31Q12999 210 aa17.1■□□□□ 0.33
FAM49B-214ENST00000519540 QSOX2Q6ZRP7 698 aa17.1■□□□□ 0.33
FAM49B-214ENST00000519540 FAM181AQ8N9Y4 354 aa17.1■□□□□ 0.33
FAM49B-214ENST00000519540 PIGXQ8TBF5 258 aa17.1■□□□□ 0.33
FAM49B-214ENST00000519540 TRUB1Q8WWH5 349 aaKnown RBP17.1■□□□□ 0.33
FAM49B-214ENST00000519540 CLN6Q9NWW5 311 aa17.1■□□□□ 0.33
FAM49B-214ENST00000519540 ADAMTS20P59510 1910 aa17.1■□□□□ 0.33
FAM49B-214ENST00000519540 TRAPPC13A5PLN9 417 aa17.09■□□□□ 0.33
FAM49B-214ENST00000519540 FMO6PO60774 539 aa17.09■□□□□ 0.33
FAM49B-214ENST00000519540 ATE1O95260 518 aa17.09■□□□□ 0.33
FAM49B-214ENST00000519540 FADS2O95864 444 aaKnown RBP17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms