RNA–Protein interactions for RNA: ENST00000519004.5

PABPC1-208, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-208ENST00000519004 MAPK9P45984 424 aa12.71□□□□□ -0.37
PABPC1-208ENST00000519004 DGKGP49619 791 aa12.71□□□□□ -0.37
PABPC1-208ENST00000519004 PGFP49763 221 aa12.71□□□□□ -0.37
PABPC1-208ENST00000519004 RPS27AP62979 156 aaKnown RBP12.71□□□□□ -0.37
PABPC1-208ENST00000519004 UBA52P62987 128 aaKnown RBP12.71□□□□□ -0.37
PABPC1-208ENST00000519004 PITPNAQ00169 270 aa12.71□□□□□ -0.37
PABPC1-208ENST00000519004 DUSP4Q13115 394 aa12.71□□□□□ -0.37
PABPC1-208ENST00000519004 FZD5Q13467 585 aa12.71□□□□□ -0.37
PABPC1-208ENST00000519004 SLC25A35Q3KQZ1 300 aa12.71□□□□□ -0.37
PABPC1-208ENST00000519004 GGTA1PQ4G0N0 100 aa12.71□□□□□ -0.37
PABPC1-208ENST00000519004 C10orf91Q5T1B1 145 aa12.71□□□□□ -0.37
PABPC1-208ENST00000519004 ARMC12Q5T9G4 340 aa12.71□□□□□ -0.37
PABPC1-208ENST00000519004 TECPR1Q7Z6L1 1165 aa12.71□□□□□ -0.37
PABPC1-208ENST00000519004 TPRA1Q86W33 373 aa12.71□□□□□ -0.37
PABPC1-208ENST00000519004 ZNF683Q8IZ20 524 aa12.71□□□□□ -0.37
PABPC1-208ENST00000519004 GPC2Q8N158 579 aa12.71□□□□□ -0.37
PABPC1-208ENST00000519004 GSDMCQ9BYG8 508 aa12.71□□□□□ -0.37
PABPC1-208ENST00000519004 TMEM38AQ9H6F2 299 aa12.71□□□□□ -0.37
PABPC1-208ENST00000519004 RNF122Q9H9V4 155 aa12.71□□□□□ -0.37
PABPC1-208ENST00000519004 BPIFA1Q9NP55 256 aa12.71□□□□□ -0.37
PABPC1-208ENST00000519004 PRDM5Q9NQX1 630 aaPredicted RBP12.71□□□□□ -0.37
PABPC1-208ENST00000519004 C1GALT1Q9NS00 363 aa12.71□□□□□ -0.37
PABPC1-208ENST00000519004 TMEM161AQ9NX61 479 aa12.71□□□□□ -0.37
PABPC1-208ENST00000519004 ZNF282Q9UDV7 671 aaPredicted RBP12.71□□□□□ -0.37
PABPC1-208ENST00000519004 FBXL3Q9UKT7 428 aa12.71□□□□□ -0.37
PABPC1-208ENST00000519004 PLXNA4Q9HCM2 1894 aa12.71□□□□□ -0.37
PABPC1-208ENST00000519004 RFXAPO00287 272 aa12.71□□□□□ -0.38
PABPC1-208ENST00000519004 RNF13O43567 381 aa12.71□□□□□ -0.38
PABPC1-208ENST00000519004 HYAL3O43820 417 aaPredicted RBP12.71□□□□□ -0.38
PABPC1-208ENST00000519004 CREBL2O60519 120 aaPredicted RBP12.71□□□□□ -0.38
PABPC1-208ENST00000519004 OAZ2O95190 189 aa12.71□□□□□ -0.38
PABPC1-208ENST00000519004 LAG3P18627 525 aa12.71□□□□□ -0.38
PABPC1-208ENST00000519004 ANXA7P20073 488 aaKnown RBP12.71□□□□□ -0.38
PABPC1-208ENST00000519004 ACHEP22303 614 aa12.71□□□□□ -0.38
PABPC1-208ENST00000519004 SPAM1P38567 509 aa12.71□□□□□ -0.38
PABPC1-208ENST00000519004 GCGRP47871 477 aa12.71□□□□□ -0.38
PABPC1-208ENST00000519004 GIPRP48546 466 aa12.71□□□□□ -0.38
PABPC1-208ENST00000519004 CCR8P51685 355 aa12.71□□□□□ -0.38
PABPC1-208ENST00000519004 RIDAP52758 137 aaKnown RBP12.71□□□□□ -0.38
PABPC1-208ENST00000519004 H2BFSP57053 126 aa12.71□□□□□ -0.38
PABPC1-208ENST00000519004 CDK5Q00535 292 aa12.71□□□□□ -0.38
PABPC1-208ENST00000519004 SMCO1Q147U7 214 aa12.71□□□□□ -0.38
PABPC1-208ENST00000519004 TEX30Q5JUR7 227 aa12.71□□□□□ -0.38
PABPC1-208ENST00000519004 ELFN2Q5R3F8 820 aa12.71□□□□□ -0.38
PABPC1-208ENST00000519004 SLC36A4Q6YBV0 504 aa12.71□□□□□ -0.38
PABPC1-208ENST00000519004 ESPNLQ6ZVH7 1005 aa12.71□□□□□ -0.38
PABPC1-208ENST00000519004 NAA40Q86UY6 237 aa12.71□□□□□ -0.38
PABPC1-208ENST00000519004 OR4F15Q8NGB8 312 aa12.71□□□□□ -0.38
PABPC1-208ENST00000519004 OR52N2Q8NGI0 321 aa12.71□□□□□ -0.38
PABPC1-208ENST00000519004 SMIM4Q8WVI0 70 aa12.71□□□□□ -0.38
PABPC1-208ENST00000519004 NR4A3Q92570 626 aa12.71□□□□□ -0.38
PABPC1-208ENST00000519004 MRPS31Q92665 395 aaKnown RBP12.71□□□□□ -0.38
PABPC1-208ENST00000519004 MRPL38Q96DV4 380 aaKnown RBP12.71□□□□□ -0.38
PABPC1-208ENST00000519004 PFDN5Q99471 154 aa12.71□□□□□ -0.38
PABPC1-208ENST00000519004 TM6SF2Q9BZW4 377 aa12.71□□□□□ -0.38
PABPC1-208ENST00000519004 MROH8Q9H579 483 aa12.71□□□□□ -0.38
PABPC1-208ENST00000519004 TAS2R5Q9NYW4 299 aa12.71□□□□□ -0.38
PABPC1-208ENST00000519004 RCE1Q9Y256 329 aa12.71□□□□□ -0.38
PABPC1-208ENST00000519004 GPR52Q9Y2T5 361 aa12.71□□□□□ -0.38
PABPC1-208ENST00000519004 CARHSP1Q9Y2V2 147 aaKnown RBP12.71□□□□□ -0.38
PABPC1-208ENST00000519004 KIAA1671Q9BY89 1806 aa12.71□□□□□ -0.38
PABPC1-208ENST00000519004 TXNL1O43396 289 aa12.7□□□□□ -0.38
PABPC1-208ENST00000519004 CHST10O43529 356 aa12.7□□□□□ -0.38
PABPC1-208ENST00000519004 F12P00748 615 aaPredicted RBP12.7□□□□□ -0.38
PABPC1-208ENST00000519004 SFTPCP11686 197 aa12.7□□□□□ -0.38
PABPC1-208ENST00000519004 RHOQP17081 205 aa12.7□□□□□ -0.38
PABPC1-208ENST00000519004 CSF2RBP32927 897 aa12.7□□□□□ -0.38
PABPC1-208ENST00000519004 EIF2S3P41091 472 aaKnown RBP12.7□□□□□ -0.38
PABPC1-208ENST00000519004 AKR1C2P52895 323 aa12.7□□□□□ -0.38
PABPC1-208ENST00000519004 BACE1P56817 501 aa12.7□□□□□ -0.38
PABPC1-208ENST00000519004 OC90Q02509 493 aaPredicted RBP12.7□□□□□ -0.38
PABPC1-208ENST00000519004 AKR1C1Q04828 323 aa12.7□□□□□ -0.38
PABPC1-208ENST00000519004 RAB33AQ14088 237 aa12.7□□□□□ -0.38
PABPC1-208ENST00000519004 ARHGEF7Q14155 803 aa12.7□□□□□ -0.38
PABPC1-208ENST00000519004 C2orf68Q2NKX9 166 aa12.7□□□□□ -0.38
PABPC1-208ENST00000519004 FAM27D1Q5T7N8 215 aa12.7□□□□□ -0.38
PABPC1-208ENST00000519004 CPTPQ5TA50 214 aa12.7□□□□□ -0.38
PABPC1-208ENST00000519004 FAM122BQ7Z309 247 aa12.7□□□□□ -0.38
PABPC1-208ENST00000519004 KLBQ86Z14 1044 aa12.7□□□□□ -0.38
PABPC1-208ENST00000519004 KLHL36Q8N4N3 616 aa12.7□□□□□ -0.38
PABPC1-208ENST00000519004 HORMAD2Q8N7B1 307 aa12.7□□□□□ -0.38
PABPC1-208ENST00000519004 WDSUB1Q8N9V3 476 aa12.7□□□□□ -0.38
PABPC1-208ENST00000519004 OR5M1Q8NGP8 315 aa12.7□□□□□ -0.38
PABPC1-208ENST00000519004 MAP3K3Q99759 626 aa12.7□□□□□ -0.38
PABPC1-208ENST00000519004 CIPCQ9C0C6 399 aa12.7□□□□□ -0.38
PABPC1-208ENST00000519004 ZYG11BQ9C0D3 744 aa12.7□□□□□ -0.38
PABPC1-208ENST00000519004 TMEM248Q9NWD8 314 aa12.7□□□□□ -0.38
PABPC1-208ENST00000519004 A0A1B0GWJ7 208 aa12.7□□□□□ -0.38
PABPC1-208ENST00000519004 MOXD2PA6NHM9 499 aa12.7□□□□□ -0.38
PABPC1-208ENST00000519004 PRAMEF4O60810 478 aa12.7□□□□□ -0.38
PABPC1-208ENST00000519004 CLN5O75503 358 aa12.7□□□□□ -0.38
PABPC1-208ENST00000519004 CD63P08962 238 aa12.7□□□□□ -0.38
PABPC1-208ENST00000519004 RPA2P15927 270 aa12.7□□□□□ -0.38
PABPC1-208ENST00000519004 LPOP22079 712 aaPredicted RBP12.7□□□□□ -0.38
PABPC1-208ENST00000519004 RPL3P39023 403 aaKnown RBP12.7□□□□□ -0.38
PABPC1-208ENST00000519004 ACTR1BP42025 376 aa12.7□□□□□ -0.38
PABPC1-208ENST00000519004 SLC6A11P48066 632 aa12.7□□□□□ -0.38
PABPC1-208ENST00000519004 ZNF235Q14590 738 aa12.7□□□□□ -0.38
PABPC1-208ENST00000519004 PRAMEF9Q5VWM5 478 aa12.7□□□□□ -0.38
PABPC1-208ENST00000519004 C18orf63Q68DL7 685 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms