RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 XKR8Q9H6D3 395 aa-1.99□□□□□ -2.73
RNU6-539P-201ENST00000516665 C12orf10Q9HB07 376 aa-1.99□□□□□ -2.73
RNU6-539P-201ENST00000516665 FANCFQ9NPI8 374 aa-1.99□□□□□ -2.73
RNU6-539P-201ENST00000516665 FBXO6Q9NRD1 293 aaPredicted RBP-1.99□□□□□ -2.73
RNU6-539P-201ENST00000516665 BCCIPQ9P287 314 aaKnown RBP eCLIP-1.99□□□□□ -2.73
RNU6-539P-201ENST00000516665 MRPS33Q9Y291 106 aaKnown RBP-1.99□□□□□ -2.73
RNU6-539P-201ENST00000516665 NCKAP1Q9Y2A7 1128 aa-1.99□□□□□ -2.73
RNU6-539P-201ENST00000516665 SOX21Q9Y651 276 aaPredicted RBP-1.99□□□□□ -2.73
RNU6-539P-201ENST00000516665 CACNA1BQ00975 2339 aa-1.99□□□□□ -2.73
RNU6-539P-201ENST00000516665 SETXQ7Z333 2677 aaKnown RBP-2□□□□□ -2.73
RNU6-539P-201ENST00000516665 ASXL3Q9C0F0 2248 aa-2□□□□□ -2.73
RNU6-539P-201ENST00000516665 IGHV5-51A0A0C4DH38 117 aa-2□□□□□ -2.73
RNU6-539P-201ENST00000516665 A0A1B0GVI7 797 aa-2□□□□□ -2.73
RNU6-539P-201ENST00000516665 TMEM120BA0PK00 339 aa-2□□□□□ -2.73
RNU6-539P-201ENST00000516665 GOLGA6CA6NDK9 693 aa-2□□□□□ -2.73
RNU6-539P-201ENST00000516665 GOLGA6BA6NDN3 693 aa-2□□□□□ -2.73
RNU6-539P-201ENST00000516665 NPIPB15A6NHN6 443 aaPredicted RBP-2□□□□□ -2.73
RNU6-539P-201ENST00000516665 IDSB3KWA1 339 aa-2□□□□□ -2.73
RNU6-539P-201ENST00000516665 PGRMC2O15173 223 aa-2□□□□□ -2.73
RNU6-539P-201ENST00000516665 RAD51BO15315 384 aa-2□□□□□ -2.73
RNU6-539P-201ENST00000516665 CLN5O75503 358 aa-2□□□□□ -2.73
RNU6-539P-201ENST00000516665 OAS1P00973 400 aaKnown RBP-2□□□□□ -2.73
RNU6-539P-201ENST00000516665 OXTP01178 125 aa-2□□□□□ -2.73
RNU6-539P-201ENST00000516665 OPRK1P41145 380 aa-2□□□□□ -2.73
RNU6-539P-201ENST00000516665 SLC1A3P43003 542 aa-2□□□□□ -2.73
RNU6-539P-201ENST00000516665 TPMTP51580 245 aa-2□□□□□ -2.73
RNU6-539P-201ENST00000516665 AK2P54819 239 aa-2□□□□□ -2.73
RNU6-539P-201ENST00000516665 RPL7AP62424 266 aaKnown RBP-2□□□□□ -2.73
RNU6-539P-201ENST00000516665 CSNK1G2P78368 415 aa-2□□□□□ -2.73
RNU6-539P-201ENST00000516665 FUT5Q11128 374 aa-2□□□□□ -2.73
RNU6-539P-201ENST00000516665 HEPACAMQ14CZ8 416 aa-2□□□□□ -2.73
RNU6-539P-201ENST00000516665 PPP2R5AQ15172 486 aa-2□□□□□ -2.73
RNU6-539P-201ENST00000516665 SLC9A3R2Q15599 337 aa-2□□□□□ -2.73
RNU6-539P-201ENST00000516665 RBBP7Q16576 425 aa-2□□□□□ -2.73
RNU6-539P-201ENST00000516665 CFAP221Q4G0U5 840 aa-2□□□□□ -2.73
RNU6-539P-201ENST00000516665 DCAF12Q5T6F0 453 aa-2□□□□□ -2.73
RNU6-539P-201ENST00000516665 CPTPQ5TA50 214 aa-2□□□□□ -2.73
RNU6-539P-201ENST00000516665 LGSNQ5TDP6 509 aa-2□□□□□ -2.73
RNU6-539P-201ENST00000516665 PARGQ86W56 976 aa-2□□□□□ -2.73
RNU6-539P-201ENST00000516665 MFSD6LQ8IWD5 586 aa-2□□□□□ -2.73
RNU6-539P-201ENST00000516665 SKA3Q8IX90 412 aa-2□□□□□ -2.73
RNU6-539P-201ENST00000516665 MYO1HQ8N1T3 1032 aa-2□□□□□ -2.73
RNU6-539P-201ENST00000516665 OR13C5Q8NGS8 318 aa-2□□□□□ -2.73
RNU6-539P-201ENST00000516665 NFKBIDQ8NI38 313 aa-2□□□□□ -2.73
RNU6-539P-201ENST00000516665 TTC8Q8TAM2 541 aa-2□□□□□ -2.73
RNU6-539P-201ENST00000516665 NDRG1Q92597 394 aaKnown RBP-2□□□□□ -2.73
RNU6-539P-201ENST00000516665 KRT35Q92764 455 aa-2□□□□□ -2.73
RNU6-539P-201ENST00000516665 PSMG2Q969U7 264 aa-2□□□□□ -2.73
RNU6-539P-201ENST00000516665 MCHR2Q969V1 340 aa-2□□□□□ -2.73
RNU6-539P-201ENST00000516665 MRPL24Q96A35 216 aaKnown RBP-2□□□□□ -2.73
RNU6-539P-201ENST00000516665 PGM2Q96G03 612 aa-2□□□□□ -2.73
RNU6-539P-201ENST00000516665 PCED1BQ96HM7 432 aa-2□□□□□ -2.73
RNU6-539P-201ENST00000516665 IGF2BP2-AS1Q96M15 143 aa-2□□□□□ -2.73
RNU6-539P-201ENST00000516665 RAB34Q9BZG1 259 aa-2□□□□□ -2.73
RNU6-539P-201ENST00000516665 OR11A1Q9GZK7 315 aa-2□□□□□ -2.73
RNU6-539P-201ENST00000516665 WDR12Q9GZL7 423 aaKnown RBP-2□□□□□ -2.73
RNU6-539P-201ENST00000516665 NOL11Q9H8H0 719 aaKnown RBP-2□□□□□ -2.73
RNU6-539P-201ENST00000516665 ZNF286AQ9HBT8 521 aa-2□□□□□ -2.73
RNU6-539P-201ENST00000516665 EXOSC3Q9NQT5 275 aaKnown RBP-2□□□□□ -2.73
RNU6-539P-201ENST00000516665 CENPMQ9NSP4 180 aa-2□□□□□ -2.73
RNU6-539P-201ENST00000516665 ARHGEF38Q9NXL2 777 aa-2□□□□□ -2.73
RNU6-539P-201ENST00000516665 GOLGA6AQ9NYA3 693 aa-2□□□□□ -2.73
RNU6-539P-201ENST00000516665 NAALADL1Q9UQQ1 740 aa-2□□□□□ -2.73
RNU6-539P-201ENST00000516665 COL4A3BPQ9Y5P4 624 aa-2□□□□□ -2.73
RNU6-539P-201ENST00000516665 RPS6KL1Q9Y6S9 549 aa-2□□□□□ -2.73
RNU6-539P-201ENST00000516665 ESYT2A0FGR8 921 aa-2.01□□□□□ -2.73
RNU6-539P-201ENST00000516665 VPS37CA5D8V6 355 aaPredicted RBP-2.01□□□□□ -2.73
RNU6-539P-201ENST00000516665 E9PSI1 815 aa-2.01□□□□□ -2.73
RNU6-539P-201ENST00000516665 POLR1CO15160 346 aaPredicted RBP-2.01□□□□□ -2.73
RNU6-539P-201ENST00000516665 HCRTR1O43613 425 aa-2.01□□□□□ -2.73
RNU6-539P-201ENST00000516665 VEGFDO43915 354 aa-2.01□□□□□ -2.73
RNU6-539P-201ENST00000516665 RHOBTB1O94844 696 aa-2.01□□□□□ -2.73
RNU6-539P-201ENST00000516665 ANP32DO95626 131 aa-2.01□□□□□ -2.73
RNU6-539P-201ENST00000516665 PFN1P07737 140 aaKnown RBP-2.01□□□□□ -2.73
RNU6-539P-201ENST00000516665 IFIT1P09914 478 aaKnown RBP-2.01□□□□□ -2.73
RNU6-539P-201ENST00000516665 CYP11B2P19099 503 aa-2.01□□□□□ -2.73
RNU6-539P-201ENST00000516665 PAPOLAP51003 745 aaKnown RBP-2.01□□□□□ -2.73
RNU6-539P-201ENST00000516665 RBPJQ06330 500 aa-2.01□□□□□ -2.73
RNU6-539P-201ENST00000516665 MERTKQ12866 999 aa-2.01□□□□□ -2.73
RNU6-539P-201ENST00000516665 IFT88Q13099 833 aa-2.01□□□□□ -2.73
RNU6-539P-201ENST00000516665 GPR68Q15743 365 aa-2.01□□□□□ -2.73
RNU6-539P-201ENST00000516665 NRF1Q16656 503 aa-2.01□□□□□ -2.73
RNU6-539P-201ENST00000516665 NAA16Q6N069 864 aaPredicted RBP-2.01□□□□□ -2.73
RNU6-539P-201ENST00000516665 FUT10Q6P4F1 479 aa-2.01□□□□□ -2.73
RNU6-539P-201ENST00000516665 TDHQ8IZJ6 230 aa-2.01□□□□□ -2.73
RNU6-539P-201ENST00000516665 RYBPQ8N488 228 aaPredicted RBP-2.01□□□□□ -2.73
RNU6-539P-201ENST00000516665 TC2NQ8N9U0 490 aa-2.01□□□□□ -2.73
RNU6-539P-201ENST00000516665 ICA1LQ8NDH6 482 aa-2.01□□□□□ -2.73
RNU6-539P-201ENST00000516665 MOB3AQ96BX8 217 aa-2.01□□□□□ -2.73
RNU6-539P-201ENST00000516665 ZNF274Q96GC6 653 aaPredicted RBP-2.01□□□□□ -2.73
RNU6-539P-201ENST00000516665 CELF6Q96J87 481 aaKnown RBP-2.01□□□□□ -2.73
RNU6-539P-201ENST00000516665 ERGIC2Q96RQ1 377 aa-2.01□□□□□ -2.73
RNU6-539P-201ENST00000516665 RAB40CQ96S21 281 aa-2.01□□□□□ -2.73
RNU6-539P-201ENST00000516665 GPR63Q9BZJ6 419 aa-2.01□□□□□ -2.73
RNU6-539P-201ENST00000516665 TRIM7Q9C029 511 aa-2.01□□□□□ -2.73
RNU6-539P-201ENST00000516665 DDX47Q9H0S4 455 aaKnown RBP-2.01□□□□□ -2.73
RNU6-539P-201ENST00000516665 SLC25A22Q9H936 323 aa-2.01□□□□□ -2.73
RNU6-539P-201ENST00000516665 RPF1Q9H9Y2 349 aaKnown RBP-2.01□□□□□ -2.73
RNU6-539P-201ENST00000516665 ASF1BQ9NVP2 202 aa-2.01□□□□□ -2.73
RNU6-539P-201ENST00000516665 SMPD3Q9NY59 655 aaPredicted RBP-2.01□□□□□ -2.73
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms