RNA–Protein interactions for RNA: ENST00000515711.1

LMNA-224, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-224ENST00000515711 CLCA3PQ9Y6N3 262 aa11.09□□□□□ -0.63
LMNA-224ENST00000515711 LOC400499M0QZD8 3231 aa11.09□□□□□ -0.63
LMNA-224ENST00000515711 TRIM64A6NGJ6 449 aa11.08□□□□□ -0.64
LMNA-224ENST00000515711 OR6C76A6NM76 312 aa11.08□□□□□ -0.64
LMNA-224ENST00000515711 POLR1CO15160 346 aaPredicted RBP11.08□□□□□ -0.64
LMNA-224ENST00000515711 MITFO75030 526 aaPredicted RBP11.08□□□□□ -0.64
LMNA-224ENST00000515711 LRP3O75074 770 aa11.08□□□□□ -0.64
LMNA-224ENST00000515711 OR5F1O95221 314 aa11.08□□□□□ -0.64
LMNA-224ENST00000515711 CLIC3O95833 236 aa11.08□□□□□ -0.64
LMNA-224ENST00000515711 FGF5P12034 268 aa11.08□□□□□ -0.64
LMNA-224ENST00000515711 LCN1P31025 176 aa11.08□□□□□ -0.64
LMNA-224ENST00000515711 RPL5P46777 297 aaKnown RBP11.08□□□□□ -0.64
LMNA-224ENST00000515711 NR1H2P55055 460 aa11.08□□□□□ -0.64
LMNA-224ENST00000515711 ESRRGP62508 458 aa11.08□□□□□ -0.64
LMNA-224ENST00000515711 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.08□□□□□ -0.64
LMNA-224ENST00000515711 FLYWCH1Q4VC44 716 aa11.08□□□□□ -0.64
LMNA-224ENST00000515711 CCNJQ5T5M9 372 aa11.08□□□□□ -0.64
LMNA-224ENST00000515711 PLEKHM3Q6ZWE6 761 aa11.08□□□□□ -0.64
LMNA-224ENST00000515711 OLIG3Q7RTU3 272 aa11.08□□□□□ -0.64
LMNA-224ENST00000515711 TSPYL5Q86VY4 417 aaPredicted RBP11.08□□□□□ -0.64
LMNA-224ENST00000515711 TMEM151BQ8IW70 566 aa11.08□□□□□ -0.64
LMNA-224ENST00000515711 CMIPQ8IY22 773 aa11.08□□□□□ -0.64
LMNA-224ENST00000515711 SHISA5Q8N114 240 aa11.08□□□□□ -0.64
LMNA-224ENST00000515711 AQP11Q8NBQ7 271 aa11.08□□□□□ -0.64
LMNA-224ENST00000515711 AGBL5Q8NDL9 886 aa11.08□□□□□ -0.64
LMNA-224ENST00000515711 RCBTB1Q8NDN9 531 aa11.08□□□□□ -0.64
LMNA-224ENST00000515711 C16orf52Q8NHV5 167 aa11.08□□□□□ -0.64
LMNA-224ENST00000515711 FBLIM1Q8WUP2 373 aa11.08□□□□□ -0.64
LMNA-224ENST00000515711 SLC38A4Q969I6 547 aa11.08□□□□□ -0.64
LMNA-224ENST00000515711 CLIP3Q96DZ5 547 aa11.08□□□□□ -0.64
LMNA-224ENST00000515711 HRASLS5Q96KN8 279 aa11.08□□□□□ -0.64
LMNA-224ENST00000515711 FUZQ9BT04 418 aa11.08□□□□□ -0.64
LMNA-224ENST00000515711 RSPO3Q9BXY4 272 aaPredicted RBP11.08□□□□□ -0.64
LMNA-224ENST00000515711 DGCR6LQ9BY27 220 aa11.08□□□□□ -0.64
LMNA-224ENST00000515711 QRSL1Q9H0R6 528 aaKnown RBP11.08□□□□□ -0.64
LMNA-224ENST00000515711 PNO1Q9NRX1 252 aaKnown RBP11.08□□□□□ -0.64
LMNA-224ENST00000515711 RXFP3Q9NSD7 469 aa11.08□□□□□ -0.64
LMNA-224ENST00000515711 AKAP7Q9P0M2 348 aaPredicted RBP11.08□□□□□ -0.64
LMNA-224ENST00000515711 COPS7AQ9UBW8 275 aa11.08□□□□□ -0.64
LMNA-224ENST00000515711 NDRG4Q9ULP0 352 aaKnown RBP11.08□□□□□ -0.64
LMNA-224ENST00000515711 CBLCQ9ULV8 474 aa11.08□□□□□ -0.64
LMNA-224ENST00000515711 PCDHGB5Q9Y5G0 923 aa11.08□□□□□ -0.64
LMNA-224ENST00000515711 SDK1Q7Z5N4 2213 aa11.07□□□□□ -0.64
LMNA-224ENST00000515711 TRBV4-1A0A0J9YWV2 114 aa11.07□□□□□ -0.64
LMNA-224ENST00000515711 GXYLT2A0PJZ3 443 aa11.07□□□□□ -0.64
LMNA-224ENST00000515711 SH3PXD2BA1X283 911 aa11.07□□□□□ -0.64
LMNA-224ENST00000515711 CDHR4A6H8M9 788 aa11.07□□□□□ -0.64
LMNA-224ENST00000515711 FRG2CA6NGY1 282 aa11.07□□□□□ -0.64
LMNA-224ENST00000515711 E9PQ18 207 aa11.07□□□□□ -0.64
LMNA-224ENST00000515711 PCDH17O14917 1159 aa11.07□□□□□ -0.64
LMNA-224ENST00000515711 HYAL3O43820 417 aaPredicted RBP11.07□□□□□ -0.64
LMNA-224ENST00000515711 CPNE3O75131 537 aaKnown RBP11.07□□□□□ -0.64
LMNA-224ENST00000515711 NME6O75414 186 aaPredicted RBP11.07□□□□□ -0.64
LMNA-224ENST00000515711 SEC24DO94855 1032 aaPredicted RBP11.07□□□□□ -0.64
LMNA-224ENST00000515711 GSTM3P21266 225 aa11.07□□□□□ -0.64
LMNA-224ENST00000515711 CSNK2BP67870 215 aa11.07□□□□□ -0.64
LMNA-224ENST00000515711 DCDP81605 110 aaKnown RBP11.07□□□□□ -0.64
LMNA-224ENST00000515711 TEKQ02763 1124 aa11.07□□□□□ -0.64
LMNA-224ENST00000515711 ZFP36L1Q07352 338 aaKnown RBP11.07□□□□□ -0.64
LMNA-224ENST00000515711 SF3A2Q15428 464 aaKnown RBP11.07□□□□□ -0.64
LMNA-224ENST00000515711 NPTX1Q15818 432 aa11.07□□□□□ -0.64
LMNA-224ENST00000515711 ZNF141Q15928 474 aa11.07□□□□□ -0.64
LMNA-224ENST00000515711 NKAIN1Q4KMZ8 207 aa11.07□□□□□ -0.64
LMNA-224ENST00000515711 PRAMEF17Q5VTA0 474 aa11.07□□□□□ -0.64
LMNA-224ENST00000515711 C1orf189Q5VU69 101 aa11.07□□□□□ -0.64
LMNA-224ENST00000515711 ANKRD34AQ69YU3 496 aa11.07□□□□□ -0.64
LMNA-224ENST00000515711 ZNF770Q6IQ21 691 aaPredicted RBP11.07□□□□□ -0.64
LMNA-224ENST00000515711 FIGNL1Q6PIW4 674 aa11.07□□□□□ -0.64
LMNA-224ENST00000515711 NPSR1Q6W5P4 371 aa11.07□□□□□ -0.64
LMNA-224ENST00000515711 COX15Q7KZN9 410 aa11.07□□□□□ -0.64
LMNA-224ENST00000515711 COMTD1Q86VU5 262 aa11.07□□□□□ -0.64
LMNA-224ENST00000515711 RBM45Q8IUH3 476 aaKnown RBP11.07□□□□□ -0.64
LMNA-224ENST00000515711 GRAMD2AQ8IUY3 354 aa11.07□□□□□ -0.64
LMNA-224ENST00000515711 DEPDC4Q8N2C3 294 aa11.07□□□□□ -0.64
LMNA-224ENST00000515711 MORN4Q8NDC4 146 aa11.07□□□□□ -0.64
LMNA-224ENST00000515711 OR9Q2Q8NGE9 314 aa11.07□□□□□ -0.64
LMNA-224ENST00000515711 SLC2A12Q8TD20 617 aa11.07□□□□□ -0.64
LMNA-224ENST00000515711 PTPMT1Q8WUK0 201 aaPredicted RBP11.07□□□□□ -0.64
LMNA-224ENST00000515711 DIO2Q92813 273 aa11.07□□□□□ -0.64
LMNA-224ENST00000515711 TSLPQ969D9 159 aa11.07□□□□□ -0.64
LMNA-224ENST00000515711 ZNF566Q969W8 418 aa11.07□□□□□ -0.64
LMNA-224ENST00000515711 SENP5Q96HI0 755 aaPredicted RBP11.07□□□□□ -0.64
LMNA-224ENST00000515711 MCHR1Q99705 422 aa11.07□□□□□ -0.64
LMNA-224ENST00000515711 ITPAQ9BY32 194 aa11.07□□□□□ -0.64
LMNA-224ENST00000515711 VN1R1Q9GZP7 353 aa11.07□□□□□ -0.64
LMNA-224ENST00000515711 HOXD1Q9GZZ0 328 aa11.07□□□□□ -0.64
LMNA-224ENST00000515711 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.07□□□□□ -0.64
LMNA-224ENST00000515711 RHCGQ9UBD6 479 aa11.07□□□□□ -0.64
LMNA-224ENST00000515711 OR10H1Q9Y4A9 318 aa11.07□□□□□ -0.64
LMNA-224ENST00000515711 CNOT1A5YKK6 2376 aaKnown RBP11.07□□□□□ -0.64
LMNA-224ENST00000515711 SMIM31A0A1B0GVY4 71 aa11.06□□□□□ -0.64
LMNA-224ENST00000515711 LNP1A1A4G5 178 aa11.06□□□□□ -0.64
LMNA-224ENST00000515711 DPPA5A6NC42 116 aa11.06□□□□□ -0.64
LMNA-224ENST00000515711 TMEM8BA6NDV4 472 aa11.06□□□□□ -0.64
LMNA-224ENST00000515711 TRIM64CA6NLI5 447 aa11.06□□□□□ -0.64
LMNA-224ENST00000515711 EFCAB7A8K855 629 aa11.06□□□□□ -0.64
LMNA-224ENST00000515711 OR10H3O60404 316 aa11.06□□□□□ -0.64
LMNA-224ENST00000515711 SEMA7AO75326 666 aa11.06□□□□□ -0.64
LMNA-224ENST00000515711 CLPSP04118 112 aa11.06□□□□□ -0.64
LMNA-224ENST00000515711 IGKV3-11P04433 115 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms