RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 IDO1P14902 403 aa11.61□□□□□ -0.55
CLCN3-210ENST00000515420 DPP4P27487 766 aa11.61□□□□□ -0.55
CLCN3-210ENST00000515420 COL8A1P27658 744 aa11.61□□□□□ -0.55
CLCN3-210ENST00000515420 RFX3P48380 749 aa11.61□□□□□ -0.55
CLCN3-210ENST00000515420 GRAMD1BQ3KR37 738 aa11.61□□□□□ -0.55
CLCN3-210ENST00000515420 GLYR1Q49A26 553 aaPredicted RBP11.61□□□□□ -0.55
CLCN3-210ENST00000515420 ACSF3Q4G176 576 aaPredicted RBP11.61□□□□□ -0.55
CLCN3-210ENST00000515420 NSUN5P2Q63ZY6 315 aa11.61□□□□□ -0.55
CLCN3-210ENST00000515420 SP5Q6BEB4 398 aaPredicted RBP11.61□□□□□ -0.55
CLCN3-210ENST00000515420 HIST2H2BCQ6DN03 193 aa11.61□□□□□ -0.55
CLCN3-210ENST00000515420 YRDCQ86U90 279 aaKnown RBP11.61□□□□□ -0.55
CLCN3-210ENST00000515420 LACC1Q8IV20 430 aa11.61□□□□□ -0.55
CLCN3-210ENST00000515420 MISPQ8IVT2 679 aa11.61□□□□□ -0.55
CLCN3-210ENST00000515420 GLB1L3Q8NCI6 653 aaPredicted RBP11.61□□□□□ -0.55
CLCN3-210ENST00000515420 OR2M3Q8NG83 312 aa11.61□□□□□ -0.55
CLCN3-210ENST00000515420 LILRB4Q8NHJ6 448 aa11.61□□□□□ -0.55
CLCN3-210ENST00000515420 GOT1L1Q8NHS2 421 aaPredicted RBP11.61□□□□□ -0.55
CLCN3-210ENST00000515420 FBXO30Q8TB52 745 aa11.61□□□□□ -0.55
CLCN3-210ENST00000515420 ZPLD1Q8TCW7 415 aa11.61□□□□□ -0.55
CLCN3-210ENST00000515420 MIPOL1Q8TD10 442 aa11.61□□□□□ -0.55
CLCN3-210ENST00000515420 ADAMTS15Q8TE58 950 aa11.61□□□□□ -0.55
CLCN3-210ENST00000515420 JADE3Q92613 823 aa11.61□□□□□ -0.55
CLCN3-210ENST00000515420 C16orf58Q96GQ5 468 aa11.61□□□□□ -0.55
CLCN3-210ENST00000515420 WDYHV1Q96HA8 205 aa11.61□□□□□ -0.55
CLCN3-210ENST00000515420 RUBCNLQ9H714 662 aa11.61□□□□□ -0.55
CLCN3-210ENST00000515420 UBQLN4Q9NRR5 601 aa11.61□□□□□ -0.55
CLCN3-210ENST00000515420 FLRT3Q9NZU0 649 aa11.61□□□□□ -0.55
CLCN3-210ENST00000515420 MARCOQ9UEW3 520 aaPredicted RBP11.61□□□□□ -0.55
CLCN3-210ENST00000515420 GPR45Q9Y5Y3 372 aa11.61□□□□□ -0.55
CLCN3-210ENST00000515420 MED12Q93074 2177 aa11.61□□□□□ -0.55
CLCN3-210ENST00000515420 NAV2Q8IVL1 2488 aa11.61□□□□□ -0.55
CLCN3-210ENST00000515420 HCFC1P51610 2035 aa11.6□□□□□ -0.55
CLCN3-210ENST00000515420 PCNX3Q9H6A9 2034 aa11.6□□□□□ -0.55
CLCN3-210ENST00000515420 CELSR2Q9HCU4 2923 aa11.6□□□□□ -0.55
CLCN3-210ENST00000515420 CD8B2A6NJW9 211 aa11.6□□□□□ -0.55
CLCN3-210ENST00000515420 B4DXG7 233 aa11.6□□□□□ -0.55
CLCN3-210ENST00000515420 ZNF195O14628 629 aa11.6□□□□□ -0.55
CLCN3-210ENST00000515420 ZIC3O60481 467 aa11.6□□□□□ -0.55
CLCN3-210ENST00000515420 TGDSO95455 350 aa11.6□□□□□ -0.55
CLCN3-210ENST00000515420 OXSR1O95747 527 aaPredicted RBP11.6□□□□□ -0.55
CLCN3-210ENST00000515420 ANGPTL1O95841 491 aa11.6□□□□□ -0.55
CLCN3-210ENST00000515420 UQCRC2P22695 453 aa11.6□□□□□ -0.55
CLCN3-210ENST00000515420 MSX1P28360 303 aa11.6□□□□□ -0.55
CLCN3-210ENST00000515420 SOAT1P35610 550 aa11.6□□□□□ -0.55
CLCN3-210ENST00000515420 TIMP3P35625 211 aa11.6□□□□□ -0.55
CLCN3-210ENST00000515420 ZFP36L2P47974 494 aaKnown RBP11.6□□□□□ -0.55
CLCN3-210ENST00000515420 TXNL4AP83876 142 aaKnown RBP11.6□□□□□ -0.55
CLCN3-210ENST00000515420 RCAN2Q14206 197 aa11.6□□□□□ -0.55
CLCN3-210ENST00000515420 CDSNQ15517 529 aa11.6□□□□□ -0.55
CLCN3-210ENST00000515420 BCL2A1Q16548 175 aa11.6□□□□□ -0.55
CLCN3-210ENST00000515420 GSTA3Q16772 222 aa11.6□□□□□ -0.55
CLCN3-210ENST00000515420 FAM174BQ3ZCQ3 159 aa11.6□□□□□ -0.55
CLCN3-210ENST00000515420 PDCD4Q53EL6 469 aaKnown RBP11.6□□□□□ -0.55
CLCN3-210ENST00000515420 SPANXN4Q5MJ08 99 aa11.6□□□□□ -0.55
CLCN3-210ENST00000515420 DCST2Q5T1A1 773 aa11.6□□□□□ -0.55
CLCN3-210ENST00000515420 OR5M10Q6IEU7 315 aa11.6□□□□□ -0.55
CLCN3-210ENST00000515420 MTERF4Q7Z6M4 381 aaKnown RBP11.6□□□□□ -0.55
CLCN3-210ENST00000515420 MARCH3Q86UD3 253 aa11.6□□□□□ -0.55
CLCN3-210ENST00000515420 CLECL1Q8IZS7 167 aa11.6□□□□□ -0.55
CLCN3-210ENST00000515420 ACBD4Q8NC06 268 aa11.6□□□□□ -0.55
CLCN3-210ENST00000515420 OR4A15Q8NGL6 344 aa11.6□□□□□ -0.55
CLCN3-210ENST00000515420 LRRC8CQ8TDW0 803 aa11.6□□□□□ -0.55
CLCN3-210ENST00000515420 NUDT8Q8WV74 236 aa11.6□□□□□ -0.55
CLCN3-210ENST00000515420 CDS1Q92903 461 aa11.6□□□□□ -0.55
CLCN3-210ENST00000515420 CCDC115Q96NT0 180 aa11.6□□□□□ -0.55
CLCN3-210ENST00000515420 UCN2Q96RP3 112 aa11.6□□□□□ -0.55
CLCN3-210ENST00000515420 YIPF4Q9BSR8 244 aa11.6□□□□□ -0.55
CLCN3-210ENST00000515420 HOXD1Q9GZZ0 328 aa11.6□□□□□ -0.55
CLCN3-210ENST00000515420 DSN1Q9H410 356 aa11.6□□□□□ -0.55
CLCN3-210ENST00000515420 WDR55Q9H6Y2 383 aaPredicted RBP11.6□□□□□ -0.55
CLCN3-210ENST00000515420 CALHM2Q9HA72 323 aa11.6□□□□□ -0.55
CLCN3-210ENST00000515420 ALKBH4Q9NXW9 302 aa11.6□□□□□ -0.55
CLCN3-210ENST00000515420 BTNL2Q9UIR0 455 aa11.6□□□□□ -0.55
CLCN3-210ENST00000515420 MAST4O15021 2626 aa11.6□□□□□ -0.55
CLCN3-210ENST00000515420 PKDREJQ9NTG1 2253 aa11.6□□□□□ -0.55
CLCN3-210ENST00000515420 DOCK7Q96N67 2140 aa11.59□□□□□ -0.55
CLCN3-210ENST00000515420 A0A0G2JNJ9 132 aa11.59□□□□□ -0.55
CLCN3-210ENST00000515420 GOLGA8QA0A0J9YX86 632 aa11.59□□□□□ -0.55
CLCN3-210ENST00000515420 GOLGA8OA6NCC3 632 aa11.59□□□□□ -0.55
CLCN3-210ENST00000515420 HSPB2A8KAH6 182 aa11.59□□□□□ -0.55
CLCN3-210ENST00000515420 CYSRT1A8MQ03 144 aa11.59□□□□□ -0.55
CLCN3-210ENST00000515420 GOLGA8NF8WBI6 632 aa11.59□□□□□ -0.55
CLCN3-210ENST00000515420 NDUFB5O43674 189 aa11.59□□□□□ -0.55
CLCN3-210ENST00000515420 AGR2O95994 175 aa11.59□□□□□ -0.55
CLCN3-210ENST00000515420 HPGDP15428 266 aa11.59□□□□□ -0.55
CLCN3-210ENST00000515420 ZNF708P17019 499 aa11.59□□□□□ -0.55
CLCN3-210ENST00000515420 ATP6V1C1P21283 382 aa11.59□□□□□ -0.55
CLCN3-210ENST00000515420 GRNP28799 593 aaKnown RBP11.59□□□□□ -0.55
CLCN3-210ENST00000515420 CEACAM8P31997 349 aaPredicted RBP11.59□□□□□ -0.55
CLCN3-210ENST00000515420 S100A3P33764 101 aa11.59□□□□□ -0.55
CLCN3-210ENST00000515420 LHX2P50458 406 aa11.59□□□□□ -0.55
CLCN3-210ENST00000515420 PPP2R2AP63151 447 aa11.59□□□□□ -0.55
CLCN3-210ENST00000515420 PHC1P78364 1004 aa11.59□□□□□ -0.55
CLCN3-210ENST00000515420 HSPB2Q16082 182 aa11.59□□□□□ -0.55
CLCN3-210ENST00000515420 SLC25A35Q3KQZ1 300 aa11.59□□□□□ -0.55
CLCN3-210ENST00000515420 SLC9B1Q4ZJI4 515 aa11.59□□□□□ -0.55
CLCN3-210ENST00000515420 DCST1Q5T197 706 aa11.59□□□□□ -0.55
CLCN3-210ENST00000515420 ZNF787Q6DD87 383 aa11.59□□□□□ -0.55
CLCN3-210ENST00000515420 FIGNL1Q6PIW4 674 aa11.59□□□□□ -0.55
CLCN3-210ENST00000515420 APOOLQ6UXV4 268 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms