RNA–Protein interactions for RNA: ENST00000515180.5

CDK7-212, Transcript of cyclin dependent kinase 7, humanhuman

TSL 3

Gene CDK7, Length 486 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-212ENST00000515180 TTC36A6NLP5 189 aa11.83□□□□□ -0.52
CDK7-212ENST00000515180 CLCA1A8K7I4 914 aa11.83□□□□□ -0.52
CDK7-212ENST00000515180 SHISA8B8ZZ34 492 aa11.83□□□□□ -0.52
CDK7-212ENST00000515180 NPIPA7E9PJI5 369 aa11.83□□□□□ -0.52
CDK7-212ENST00000515180 ERLIN1O75477 346 aa11.83□□□□□ -0.52
CDK7-212ENST00000515180 IL2RAP01589 272 aa11.83□□□□□ -0.52
CDK7-212ENST00000515180 NPIPA8P0DM63 369 aa11.83□□□□□ -0.52
CDK7-212ENST00000515180 GCKP35557 465 aa11.83□□□□□ -0.52
CDK7-212ENST00000515180 TIMP3P35625 211 aa11.83□□□□□ -0.52
CDK7-212ENST00000515180 PRIM2P49643 509 aa11.83□□□□□ -0.52
CDK7-212ENST00000515180 CLK3P49761 638 aaKnown RBP11.83□□□□□ -0.52
CDK7-212ENST00000515180 RNF144AP50876 292 aaPredicted RBP11.83□□□□□ -0.52
CDK7-212ENST00000515180 PSMD4P55036 377 aaKnown RBP11.83□□□□□ -0.52
CDK7-212ENST00000515180 CLDN18P56856 261 aa11.83□□□□□ -0.52
CDK7-212ENST00000515180 POU6F2P78424 691 aaPredicted RBP11.83□□□□□ -0.52
CDK7-212ENST00000515180 PRR5P85299 388 aa11.83□□□□□ -0.52
CDK7-212ENST00000515180 TLE4Q04727 773 aa11.83□□□□□ -0.52
CDK7-212ENST00000515180 FOXF2Q12947 444 aa11.83□□□□□ -0.52
CDK7-212ENST00000515180 MAD2L1Q13257 205 aaPredicted RBP11.83□□□□□ -0.52
CDK7-212ENST00000515180 TP53BP2Q13625 1128 aa11.83□□□□□ -0.52
CDK7-212ENST00000515180 RCAN2Q14206 197 aa11.83□□□□□ -0.52
CDK7-212ENST00000515180 SPDYE7PQ495Y7 208 aa11.83□□□□□ -0.52
CDK7-212ENST00000515180 VPS26BQ4G0F5 336 aa11.83□□□□□ -0.52
CDK7-212ENST00000515180 RAET1LQ5VY80 246 aa11.83□□□□□ -0.52
CDK7-212ENST00000515180 ENPP6Q6UWR7 440 aa11.83□□□□□ -0.52
CDK7-212ENST00000515180 DMRTC2Q8IXT2 367 aaPredicted RBP11.83□□□□□ -0.52
CDK7-212ENST00000515180 UBQLNLQ8IYU4 475 aa11.83□□□□□ -0.52
CDK7-212ENST00000515180 KLHDC3Q9BQ90 382 aa11.83□□□□□ -0.52
CDK7-212ENST00000515180 BHLHE41Q9C0J9 482 aaPredicted RBP11.83□□□□□ -0.52
CDK7-212ENST00000515180 TMBIM4Q9HC24 238 aa11.83□□□□□ -0.52
CDK7-212ENST00000515180 ATAD3AQ9NVI7 634 aa11.83□□□□□ -0.52
CDK7-212ENST00000515180 GIN1Q9NXP7 522 aa11.83□□□□□ -0.52
CDK7-212ENST00000515180 NOP53Q9NZM5 478 aaKnown RBP11.83□□□□□ -0.52
CDK7-212ENST00000515180 HAO1Q9UJM8 370 aa11.83□□□□□ -0.52
CDK7-212ENST00000515180 MRPS18CQ9Y3D5 142 aaKnown RBP11.83□□□□□ -0.52
CDK7-212ENST00000515180 CENPEQ02224 2701 aa11.83□□□□□ -0.52
CDK7-212ENST00000515180 MBD3L4A6NDZ8 208 aaPredicted RBP11.82□□□□□ -0.52
CDK7-212ENST00000515180 MBD3L3A6NE82 208 aaPredicted RBP11.82□□□□□ -0.52
CDK7-212ENST00000515180 MBD3L5A6NJ08 208 aaPredicted RBP11.82□□□□□ -0.52
CDK7-212ENST00000515180 FAM47E-STBD1D6RA91 191 aa11.82□□□□□ -0.52
CDK7-212ENST00000515180 H0YC42 278 aa11.82□□□□□ -0.52
CDK7-212ENST00000515180 OXSR1O95747 527 aaPredicted RBP11.82□□□□□ -0.52
CDK7-212ENST00000515180 ZNF708P17019 499 aa11.82□□□□□ -0.52
CDK7-212ENST00000515180 DDX5P17844 614 aaKnown RBP11.82□□□□□ -0.52
CDK7-212ENST00000515180 CHMP24386 653 aa11.82□□□□□ -0.52
CDK7-212ENST00000515180 SOAT1P35610 550 aa11.82□□□□□ -0.52
CDK7-212ENST00000515180 TPD52P55327 224 aaPredicted RBP11.82□□□□□ -0.52
CDK7-212ENST00000515180 NME5P56597 212 aa11.82□□□□□ -0.52
CDK7-212ENST00000515180 RPS26P62854 115 aaKnown RBP11.82□□□□□ -0.52
CDK7-212ENST00000515180 HBA1P69905 142 aa11.82□□□□□ -0.52
CDK7-212ENST00000515180 PHC1P78364 1004 aa11.82□□□□□ -0.52
CDK7-212ENST00000515180 SLC25A35Q3KQZ1 300 aa11.82□□□□□ -0.52
CDK7-212ENST00000515180 LSM12Q3MHD2 195 aaKnown RBP11.82□□□□□ -0.52
CDK7-212ENST00000515180 CDC73Q6P1J9 531 aa11.82□□□□□ -0.52
CDK7-212ENST00000515180 AAGABQ6PD74 315 aa11.82□□□□□ -0.52
CDK7-212ENST00000515180 ZCCHC12Q6PEW1 402 aa11.82□□□□□ -0.52
CDK7-212ENST00000515180 ARSKQ6UWY0 536 aa11.82□□□□□ -0.52
CDK7-212ENST00000515180 LURAP1LQ8IV03 231 aa11.82□□□□□ -0.52
CDK7-212ENST00000515180 MBD3L2Q8NHZ7 208 aaPredicted RBP11.82□□□□□ -0.52
CDK7-212ENST00000515180 ZPLD1Q8TCW7 415 aa11.82□□□□□ -0.52
CDK7-212ENST00000515180 TLCD1Q96CP7 247 aa11.82□□□□□ -0.52
CDK7-212ENST00000515180 LURAP1Q96LR2 239 aa11.82□□□□□ -0.52
CDK7-212ENST00000515180 DOCK7Q96N67 2140 aa11.82□□□□□ -0.52
CDK7-212ENST00000515180 PRPF18Q99633 342 aaKnown RBP11.82□□□□□ -0.52
CDK7-212ENST00000515180 NPAS1Q99742 590 aa11.82□□□□□ -0.52
CDK7-212ENST00000515180 BTBD2Q9BX70 525 aa11.82□□□□□ -0.52
CDK7-212ENST00000515180 DPY30Q9C005 99 aa11.82□□□□□ -0.52
CDK7-212ENST00000515180 CALHM2Q9HA72 323 aa11.82□□□□□ -0.52
CDK7-212ENST00000515180 GPATCH2Q9NW75 528 aa11.82□□□□□ -0.52
CDK7-212ENST00000515180 ASIC5Q9NY37 505 aa11.82□□□□□ -0.52
CDK7-212ENST00000515180 MARCOQ9UEW3 520 aaPredicted RBP11.82□□□□□ -0.52
CDK7-212ENST00000515180 ZNF337Q9Y3M9 751 aa11.82□□□□□ -0.52
CDK7-212ENST00000515180 GOLGA8QA0A0J9YX86 632 aa11.81□□□□□ -0.52
CDK7-212ENST00000515180 OR2M5A3KFT3 312 aa11.81□□□□□ -0.52
CDK7-212ENST00000515180 GOLGA8OA6NCC3 632 aa11.81□□□□□ -0.52
CDK7-212ENST00000515180 ALG1L2C9J202 215 aa11.81□□□□□ -0.52
CDK7-212ENST00000515180 GOLGA8NF8WBI6 632 aa11.81□□□□□ -0.52
CDK7-212ENST00000515180 SDHDO14521 159 aa11.81□□□□□ -0.52
CDK7-212ENST00000515180 DVL2O14641 736 aa11.81□□□□□ -0.52
CDK7-212ENST00000515180 ANKRD28O15084 1053 aa11.81□□□□□ -0.52
CDK7-212ENST00000515180 NDUFB5O43674 189 aa11.81□□□□□ -0.52
CDK7-212ENST00000515180 CPSF4O95639 269 aaKnown RBP11.81□□□□□ -0.52
CDK7-212ENST00000515180 TGM6O95932 706 aa11.81□□□□□ -0.52
CDK7-212ENST00000515180 KITP10721 976 aa11.81□□□□□ -0.52
CDK7-212ENST00000515180 LBPP18428 481 aa11.81□□□□□ -0.52
CDK7-212ENST00000515180 SSTR2P30874 369 aa11.81□□□□□ -0.52
CDK7-212ENST00000515180 UQCRC1P31930 480 aa11.81□□□□□ -0.52
CDK7-212ENST00000515180 DGKQP52824 942 aa11.81□□□□□ -0.52
CDK7-212ENST00000515180 SUCLG1P53597 346 aaKnown RBP11.81□□□□□ -0.52
CDK7-212ENST00000515180 CASP9P55211 416 aa11.81□□□□□ -0.52
CDK7-212ENST00000515180 CLDN15P56746 228 aa11.81□□□□□ -0.52
CDK7-212ENST00000515180 C21orf58P58505 322 aa11.81□□□□□ -0.52
CDK7-212ENST00000515180 C17orf67Q0P5P2 114 aa11.81□□□□□ -0.52
CDK7-212ENST00000515180 SF3B4Q15427 424 aaKnown RBP eCLIP11.81□□□□□ -0.52
CDK7-212ENST00000515180 CD226Q15762 336 aa11.81□□□□□ -0.52
CDK7-212ENST00000515180 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.81□□□□□ -0.52
CDK7-212ENST00000515180 SMU1Q2TAY7 513 aa11.81□□□□□ -0.52
CDK7-212ENST00000515180 OLIG3Q7RTU3 272 aa11.81□□□□□ -0.52
CDK7-212ENST00000515180 ANKRD46Q86W74 232 aa11.81□□□□□ -0.52
CDK7-212ENST00000515180 OR56A1Q8NGH5 318 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms