RNA–Protein interactions for RNA: ENST00000515035.5

TCOF1-214, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-214ENST00000515035 ZNF84P51523 738 aa12.57□□□□□ -0.4
TCOF1-214ENST00000515035 TEAD2Q15562 447 aa12.57□□□□□ -0.4
TCOF1-214ENST00000515035 PRRT3Q5FWE3 981 aa12.57□□□□□ -0.4
TCOF1-214ENST00000515035 C17orf99Q6UX52 265 aa12.57□□□□□ -0.4
TCOF1-214ENST00000515035 TP53INP2Q8IXH6 220 aa12.57□□□□□ -0.4
TCOF1-214ENST00000515035 C16orf78Q8WTQ4 265 aa12.57□□□□□ -0.4
TCOF1-214ENST00000515035 ZMYND19Q96E35 227 aaPredicted RBP12.57□□□□□ -0.4
TCOF1-214ENST00000515035 SPIN2AQ99865 258 aa12.57□□□□□ -0.4
TCOF1-214ENST00000515035 SPIN2BQ9BPZ2 258 aa12.57□□□□□ -0.4
TCOF1-214ENST00000515035 SLC25A18Q9H1K4 315 aa12.57□□□□□ -0.4
TCOF1-214ENST00000515035 KLF15Q9UIH9 416 aa12.57□□□□□ -0.4
TCOF1-214ENST00000515035 MYH2Q9UKX2 1941 aa12.57□□□□□ -0.4
TCOF1-214ENST00000515035 A0A1W2PS29 197 aa12.57□□□□□ -0.4
TCOF1-214ENST00000515035 DCDC2BA2VCK2 349 aa12.57□□□□□ -0.4
TCOF1-214ENST00000515035 ZNF623O75123 536 aa12.57□□□□□ -0.4
TCOF1-214ENST00000515035 CSF2RAP15509 400 aa12.57□□□□□ -0.4
TCOF1-214ENST00000515035 INHBCP55103 352 aa12.57□□□□□ -0.4
TCOF1-214ENST00000515035 RPS27AP62979 156 aaKnown RBP12.57□□□□□ -0.4
TCOF1-214ENST00000515035 UBA52P62987 128 aaKnown RBP12.57□□□□□ -0.4
TCOF1-214ENST00000515035 HACD4Q5VWC8 232 aa12.57□□□□□ -0.4
TCOF1-214ENST00000515035 TSSK4Q6SA08 328 aa12.57□□□□□ -0.4
TCOF1-214ENST00000515035 AVL9Q8NBF6 648 aa12.57□□□□□ -0.4
TCOF1-214ENST00000515035 ST7LQ8TDW4 575 aa12.57□□□□□ -0.4
TCOF1-214ENST00000515035 IGSF8Q969P0 613 aa12.57□□□□□ -0.4
TCOF1-214ENST00000515035 ELP4Q96EB1 424 aa12.57□□□□□ -0.4
TCOF1-214ENST00000515035 ZNF559Q9BR84 538 aa12.57□□□□□ -0.4
TCOF1-214ENST00000515035 GORASP2Q9H8Y8 452 aa12.57□□□□□ -0.4
TCOF1-214ENST00000515035 WNT6Q9Y6F9 365 aa12.57□□□□□ -0.4
TCOF1-214ENST00000515035 PCGF2P35227 344 aa12.57□□□□□ -0.4
TCOF1-214ENST00000515035 IL13RA1P78552 427 aa12.57□□□□□ -0.4
TCOF1-214ENST00000515035 ZNF252P-AS1Q0IIN9 211 aa12.57□□□□□ -0.4
TCOF1-214ENST00000515035 MBTPS1Q14703 1052 aa12.57□□□□□ -0.4
TCOF1-214ENST00000515035 RAB6CQ53S08 254 aa12.57□□□□□ -0.4
TCOF1-214ENST00000515035 C1orf220Q5T0J3 134 aa12.57□□□□□ -0.4
TCOF1-214ENST00000515035 IER5LQ5T953 404 aa12.57□□□□□ -0.4
TCOF1-214ENST00000515035 CPZQ66K79 652 aa12.57□□□□□ -0.4
TCOF1-214ENST00000515035 DOK4Q8TEW6 326 aa12.57□□□□□ -0.4
TCOF1-214ENST00000515035 MUL1Q969V5 352 aa12.57□□□□□ -0.4
TCOF1-214ENST00000515035 PITX2Q99697 317 aa12.57□□□□□ -0.4
TCOF1-214ENST00000515035 ZNF416Q9BWM5 594 aa12.57□□□□□ -0.4
TCOF1-214ENST00000515035 RAB6CQ9H0N0 254 aa12.57□□□□□ -0.4
TCOF1-214ENST00000515035 TCEAL2Q9H3H9 227 aaPredicted RBP12.57□□□□□ -0.4
TCOF1-214ENST00000515035 CA5BQ9Y2D0 317 aa12.57□□□□□ -0.4
TCOF1-214ENST00000515035 TOPAZ1Q8N9V7 1692 aa12.57□□□□□ -0.4
TCOF1-214ENST00000515035 MEIS3P1A6NDR6 274 aa12.56□□□□□ -0.4
TCOF1-214ENST00000515035 IQCF3P0C7M6 154 aa12.56□□□□□ -0.4
TCOF1-214ENST00000515035 SNU13P55769 128 aaKnown RBP12.56□□□□□ -0.4
TCOF1-214ENST00000515035 SMN1Q16637 294 aaKnown RBP12.56□□□□□ -0.4
TCOF1-214ENST00000515035 STEAP3Q658P3 488 aa12.56□□□□□ -0.4
TCOF1-214ENST00000515035 TAS1R3Q7RTX0 852 aa12.56□□□□□ -0.4
TCOF1-214ENST00000515035 ZNF679Q8IYX0 411 aa12.56□□□□□ -0.4
TCOF1-214ENST00000515035 NPWQ8N729 165 aa12.56□□□□□ -0.4
TCOF1-214ENST00000515035 CCDC71LQ8N9Z2 235 aa12.56□□□□□ -0.4
TCOF1-214ENST00000515035 ZNF417Q8TAU3 575 aa12.56□□□□□ -0.4
TCOF1-214ENST00000515035 FNDC9Q8TBE3 224 aa12.56□□□□□ -0.4
TCOF1-214ENST00000515035 SYNPRQ8TBG9 265 aa12.56□□□□□ -0.4
TCOF1-214ENST00000515035 ZBTB8AQ96BR9 441 aa12.56□□□□□ -0.4
TCOF1-214ENST00000515035 MMABQ96EY8 250 aaPredicted RBP12.56□□□□□ -0.4
TCOF1-214ENST00000515035 PTCHD1Q96NR3 888 aa12.56□□□□□ -0.4
TCOF1-214ENST00000515035 OR2M4Q96R27 311 aa12.56□□□□□ -0.4
TCOF1-214ENST00000515035 DPH1Q9BZG8 443 aa12.56□□□□□ -0.4
TCOF1-214ENST00000515035 GLTPQ9NZD2 209 aa12.56□□□□□ -0.4
TCOF1-214ENST00000515035 BTNL2Q9UIR0 455 aa12.56□□□□□ -0.4
TCOF1-214ENST00000515035 BOLA1Q9Y3E2 137 aa12.56□□□□□ -0.4
TCOF1-214ENST00000515035 PCYT1BQ9Y5K3 369 aaPredicted RBP12.56□□□□□ -0.4
TCOF1-214ENST00000515035 MYH7BA7E2Y1 1941 aa12.56□□□□□ -0.4
TCOF1-214ENST00000515035 TSPAN11A1L157 253 aa12.56□□□□□ -0.4
TCOF1-214ENST00000515035 PIP5K1CO60331 668 aa12.56□□□□□ -0.4
TCOF1-214ENST00000515035 CACNG3O60359 315 aa12.56□□□□□ -0.4
TCOF1-214ENST00000515035 CFIP05156 583 aa12.56□□□□□ -0.4
TCOF1-214ENST00000515035 LIPCP11150 499 aa12.56□□□□□ -0.4
TCOF1-214ENST00000515035 SLC2A5P22732 501 aa12.56□□□□□ -0.4
TCOF1-214ENST00000515035 DHPSP49366 369 aaPredicted RBP12.56□□□□□ -0.4
TCOF1-214ENST00000515035 AFF3P51826 1226 aaKnown RBP12.56□□□□□ -0.4
TCOF1-214ENST00000515035 TAS2R20P59543 309 aa12.56□□□□□ -0.4
TCOF1-214ENST00000515035 HNRNPKP61978 463 aaKnown RBP eCLIP12.56□□□□□ -0.4
TCOF1-214ENST00000515035 PLGLB1Q02325 96 aa12.56□□□□□ -0.4
TCOF1-214ENST00000515035 SCAPQ12770 1279 aa12.56□□□□□ -0.4
TCOF1-214ENST00000515035 RSU1Q15404 277 aa12.56□□□□□ -0.4
TCOF1-214ENST00000515035 CARD17Q5XLA6 110 aa12.56□□□□□ -0.4
TCOF1-214ENST00000515035 PAPD4Q6PIY7 484 aaKnown RBP12.56□□□□□ -0.4
TCOF1-214ENST00000515035 SLC22A25Q6T423 547 aa12.56□□□□□ -0.4
TCOF1-214ENST00000515035 SLC35F2Q8IXU6 374 aa12.56□□□□□ -0.4
TCOF1-214ENST00000515035 GPR148Q8TDV2 347 aa12.56□□□□□ -0.4
TCOF1-214ENST00000515035 SETD7Q8WTS6 366 aaKnown RBP12.56□□□□□ -0.4
TCOF1-214ENST00000515035 ADAMTS14Q8WXS8 1223 aa12.56□□□□□ -0.4
TCOF1-214ENST00000515035 PCYT2Q99447 389 aa12.56□□□□□ -0.4
TCOF1-214ENST00000515035 CASC3O15234 703 aaKnown RBP12.56□□□□□ -0.4
TCOF1-214ENST00000515035 CLEC3AO75596 197 aa12.56□□□□□ -0.4
TCOF1-214ENST00000515035 PDGFAP04085 211 aa12.56□□□□□ -0.4
TCOF1-214ENST00000515035 HNRNPA1P09651 372 aaKnown RBP eCLIP12.56□□□□□ -0.4
TCOF1-214ENST00000515035 ZNF865P0CJ78 1059 aaPredicted RBP12.56□□□□□ -0.4
TCOF1-214ENST00000515035 GABRB3P28472 473 aa12.56□□□□□ -0.4
TCOF1-214ENST00000515035 FXYD4P59646 89 aa12.56□□□□□ -0.4
TCOF1-214ENST00000515035 CTXN1P60606 82 aa12.56□□□□□ -0.4
TCOF1-214ENST00000515035 BEX5Q5H9J7 111 aa12.56□□□□□ -0.4
TCOF1-214ENST00000515035 DCST2Q5T1A1 773 aa12.56□□□□□ -0.4
TCOF1-214ENST00000515035 FCRL1Q96LA6 429 aa12.56□□□□□ -0.4
TCOF1-214ENST00000515035 TGM7Q96PF1 710 aa12.56□□□□□ -0.4
TCOF1-214ENST00000515035 ZNF587Q96SQ5 575 aaPredicted RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms