RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 TSTQ16762 297 aaKnown RBP6.92□□□□□ -1.3
CLIP1-205ENST00000514271 EXOC3L2Q2M3D2 409 aa6.92□□□□□ -1.3
CLIP1-205ENST00000514271 COL28A1Q2UY09 1125 aa6.92□□□□□ -1.3
CLIP1-205ENST00000514271 HACD4Q5VWC8 232 aa6.92□□□□□ -1.3
CLIP1-205ENST00000514271 TMEM132CQ8N3T6 1108 aa6.92□□□□□ -1.3
CLIP1-205ENST00000514271 PIGKQ92643 395 aa6.92□□□□□ -1.3
CLIP1-205ENST00000514271 ESAMQ96AP7 390 aa6.92□□□□□ -1.3
CLIP1-205ENST00000514271 OR2A7Q96R45 310 aa6.92□□□□□ -1.3
CLIP1-205ENST00000514271 GSDMCQ9BYG8 508 aa6.92□□□□□ -1.3
CLIP1-205ENST00000514271 PIGUQ9H490 435 aa6.92□□□□□ -1.3
CLIP1-205ENST00000514271 MTG2Q9H4K7 406 aa6.92□□□□□ -1.3
CLIP1-205ENST00000514271 CDCP1Q9H5V8 836 aa6.92□□□□□ -1.3
CLIP1-205ENST00000514271 SCPEP1Q9HB40 452 aa6.92□□□□□ -1.3
CLIP1-205ENST00000514271 PPP1R14DQ9NXH3 145 aa6.92□□□□□ -1.3
CLIP1-205ENST00000514271 SERGEFQ9UGK8 458 aa6.92□□□□□ -1.3
CLIP1-205ENST00000514271 A4GNTQ9UNA3 340 aa6.92□□□□□ -1.3
CLIP1-205ENST00000514271 SLC17A4Q9Y2C5 497 aa6.92□□□□□ -1.3
CLIP1-205ENST00000514271 R4GN57 208 aa6.92□□□□□ -1.3
CLIP1-205ENST00000514271 SPTY2D1-AS1A0A0U1RR47 76 aa6.92□□□□□ -1.3
CLIP1-205ENST00000514271 IGLON5A6NGN9 336 aa6.92□□□□□ -1.3
CLIP1-205ENST00000514271 NPIPB15A6NHN6 443 aaPredicted RBP6.92□□□□□ -1.3
CLIP1-205ENST00000514271 GABRR3A8MPY1 467 aa6.92□□□□□ -1.3
CLIP1-205ENST00000514271 C12orf71A8MTZ7 269 aa6.92□□□□□ -1.3
CLIP1-205ENST00000514271 PDZK1P1A8MUH7 402 aa6.92□□□□□ -1.3
CLIP1-205ENST00000514271 MPTX1A8MV57 137 aa6.92□□□□□ -1.3
CLIP1-205ENST00000514271 GSTA4O15217 222 aa6.92□□□□□ -1.3
CLIP1-205ENST00000514271 PCDH7O60245 1069 aa6.92□□□□□ -1.3
CLIP1-205ENST00000514271 ENTPD6O75354 484 aa6.92□□□□□ -1.3
CLIP1-205ENST00000514271 MPC1LP0DKB6 136 aa6.92□□□□□ -1.3
CLIP1-205ENST00000514271 JUPP14923 745 aa6.92□□□□□ -1.3
CLIP1-205ENST00000514271 PRPS1L1P21108 318 aa6.92□□□□□ -1.3
CLIP1-205ENST00000514271 IGFALSP35858 605 aa6.92□□□□□ -1.3
CLIP1-205ENST00000514271 CBX5P45973 191 aa6.92□□□□□ -1.3
CLIP1-205ENST00000514271 GSK3AP49840 483 aa6.92□□□□□ -1.3
CLIP1-205ENST00000514271 ARHGDIBP52566 201 aa6.92□□□□□ -1.3
CLIP1-205ENST00000514271 SRSF11Q05519 484 aaKnown RBP6.92□□□□□ -1.3
CLIP1-205ENST00000514271 PUDPQ08623 228 aa6.92□□□□□ -1.3
CLIP1-205ENST00000514271 ZNF273Q14593 569 aa6.92□□□□□ -1.3
CLIP1-205ENST00000514271 PTPRRQ15256 657 aa6.92□□□□□ -1.3
CLIP1-205ENST00000514271 SPIN4Q56A73 249 aa6.92□□□□□ -1.3
CLIP1-205ENST00000514271 NOXRED1Q6NXP6 359 aa6.92□□□□□ -1.3
CLIP1-205ENST00000514271 PAMR1Q6UXH9 720 aa6.92□□□□□ -1.3
CLIP1-205ENST00000514271 WASH2PQ6VEQ5 465 aa6.92□□□□□ -1.3
CLIP1-205ENST00000514271 ANKRD53Q8N9V6 530 aa6.92□□□□□ -1.3
CLIP1-205ENST00000514271 FBXO15Q8NCQ5 510 aaPredicted RBP6.92□□□□□ -1.3
CLIP1-205ENST00000514271 OR10Q1Q8NGQ4 319 aa6.92□□□□□ -1.3
CLIP1-205ENST00000514271 KISS1RQ969F8 398 aaPredicted RBP6.92□□□□□ -1.3
CLIP1-205ENST00000514271 LINC00615Q96LM1 132 aaPredicted RBP6.92□□□□□ -1.3
CLIP1-205ENST00000514271 OR4K3Q96R72 315 aa6.92□□□□□ -1.3
CLIP1-205ENST00000514271 PIP5K1AQ99755 562 aa6.92□□□□□ -1.3
CLIP1-205ENST00000514271 UCK1Q9HA47 277 aa6.92□□□□□ -1.3
CLIP1-205ENST00000514271 WASH6PQ9NQA3 447 aa6.92□□□□□ -1.3
CLIP1-205ENST00000514271 ZNF229Q9UJW7 825 aa6.92□□□□□ -1.3
CLIP1-205ENST00000514271 PCDHGA1Q9Y5H4 931 aa6.92□□□□□ -1.3
CLIP1-205ENST00000514271 U3KQV3 271 aa6.92□□□□□ -1.3
CLIP1-205ENST00000514271 V9GYQ6 96 aa6.92□□□□□ -1.3
CLIP1-205ENST00000514271 SPAG17Q6Q759 2223 aa6.92□□□□□ -1.3
CLIP1-205ENST00000514271 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.92□□□□□ -1.3
CLIP1-205ENST00000514271 GLYATL1P3A0A0U1RQE8 302 aa6.92□□□□□ -1.3
CLIP1-205ENST00000514271 ZSCAN5BA6NJL1 495 aa6.92□□□□□ -1.3
CLIP1-205ENST00000514271 MYO1GB0I1T2 1018 aa6.92□□□□□ -1.3
CLIP1-205ENST00000514271 GPR39O43194 453 aa6.92□□□□□ -1.3
CLIP1-205ENST00000514271 GFRA3O60609 400 aa6.92□□□□□ -1.3
CLIP1-205ENST00000514271 TRIM16O95361 564 aa6.92□□□□□ -1.3
CLIP1-205ENST00000514271 ADAP00813 363 aa6.92□□□□□ -1.3
CLIP1-205ENST00000514271 CSF2P04141 144 aa6.92□□□□□ -1.3
CLIP1-205ENST00000514271 ERGP11308 486 aa6.92□□□□□ -1.3
CLIP1-205ENST00000514271 CFL1P23528 166 aaKnown RBP6.92□□□□□ -1.3
CLIP1-205ENST00000514271 IL32P24001 234 aa6.92□□□□□ -1.3
CLIP1-205ENST00000514271 ELAVL4P26378 380 aaKnown RBP6.92□□□□□ -1.3
CLIP1-205ENST00000514271 IFNA8P32881 189 aa6.92□□□□□ -1.3
CLIP1-205ENST00000514271 MNDAP41218 407 aa6.92□□□□□ -1.3
CLIP1-205ENST00000514271 SOX3P41225 446 aa6.92□□□□□ -1.3
CLIP1-205ENST00000514271 CRISP1P54107 249 aa6.92□□□□□ -1.3
CLIP1-205ENST00000514271 PPP2CBP62714 309 aa6.92□□□□□ -1.3
CLIP1-205ENST00000514271 PPP2CAP67775 309 aa6.92□□□□□ -1.3
CLIP1-205ENST00000514271 HMGCS1Q01581 520 aa6.92□□□□□ -1.3
CLIP1-205ENST00000514271 RPA4Q13156 261 aa6.92□□□□□ -1.3
CLIP1-205ENST00000514271 DGCR6Q14129 220 aa6.92□□□□□ -1.3
CLIP1-205ENST00000514271 AARDQ4LEZ3 155 aa6.92□□□□□ -1.3
CLIP1-205ENST00000514271 SYT14P1Q58G82 188 aa6.92□□□□□ -1.3
CLIP1-205ENST00000514271 TRIM61Q5EBN2 209 aa6.92□□□□□ -1.3
CLIP1-205ENST00000514271 AADACL4Q5VUY2 407 aa6.92□□□□□ -1.3
CLIP1-205ENST00000514271 CD276Q5ZPR3 534 aa6.92□□□□□ -1.3
CLIP1-205ENST00000514271 PGBD2Q6P3X8 592 aa6.92□□□□□ -1.3
CLIP1-205ENST00000514271 PLD3Q8IV08 490 aa6.92□□□□□ -1.3
CLIP1-205ENST00000514271 TMEFF1Q8IYR6 380 aa6.92□□□□□ -1.3
CLIP1-205ENST00000514271 OR2T4Q8NH00 348 aa6.92□□□□□ -1.3
CLIP1-205ENST00000514271 FAM162AQ96A26 154 aa6.92□□□□□ -1.3
CLIP1-205ENST00000514271 QRFPRQ96P65 431 aa6.92□□□□□ -1.3
CLIP1-205ENST00000514271 HBEGFQ99075 208 aa6.92□□□□□ -1.3
CLIP1-205ENST00000514271 ELF4Q99607 663 aaPredicted RBP6.92□□□□□ -1.3
CLIP1-205ENST00000514271 DPH2Q9BQC3 489 aaPredicted RBP6.92□□□□□ -1.3
CLIP1-205ENST00000514271 BHLHE41Q9C0J9 482 aaPredicted RBP6.92□□□□□ -1.3
CLIP1-205ENST00000514271 ARRDC1-AS1Q9H2J1 176 aa6.92□□□□□ -1.3
CLIP1-205ENST00000514271 FOLH1BQ9HBA9 442 aa6.92□□□□□ -1.3
CLIP1-205ENST00000514271 NANSQ9NR45 359 aa6.92□□□□□ -1.3
CLIP1-205ENST00000514271 TAS2R7Q9NYW3 318 aa6.92□□□□□ -1.3
CLIP1-205ENST00000514271 NLGN3Q9NZ94 848 aa6.92□□□□□ -1.3
CLIP1-205ENST00000514271 GULP1Q9UBP9 304 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms