RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 DNASE1L1P49184 302 aa3.28□□□□□ -1.88
PDLIM5-218ENST00000513341 PNLIPRP1P54315 467 aa3.28□□□□□ -1.88
PDLIM5-218ENST00000513341 CSE1LP55060 971 aaKnown RBP3.28□□□□□ -1.88
PDLIM5-218ENST00000513341 CASP9P55211 416 aa3.28□□□□□ -1.88
PDLIM5-218ENST00000513341 TAS2R40P59535 323 aa3.28□□□□□ -1.88
PDLIM5-218ENST00000513341 KCNJ2P63252 427 aa3.28□□□□□ -1.88
PDLIM5-218ENST00000513341 BTG2P78543 158 aa3.28□□□□□ -1.88
PDLIM5-218ENST00000513341 FAM27E3Q08E93 113 aa3.28□□□□□ -1.88
PDLIM5-218ENST00000513341 KLHL30Q0D2K2 578 aa3.28□□□□□ -1.88
PDLIM5-218ENST00000513341 BIKQ13323 160 aa3.28□□□□□ -1.88
PDLIM5-218ENST00000513341 FGFBP1Q14512 234 aa3.28□□□□□ -1.88
PDLIM5-218ENST00000513341 NRF1Q16656 503 aa3.28□□□□□ -1.88
PDLIM5-218ENST00000513341 TYSND1Q2T9J0 566 aa3.28□□□□□ -1.88
PDLIM5-218ENST00000513341 FAM174BQ3ZCQ3 159 aa3.28□□□□□ -1.88
PDLIM5-218ENST00000513341 CCSMST1Q4G0I0 132 aa3.28□□□□□ -1.88
PDLIM5-218ENST00000513341 ZNF585BQ52M93 769 aa3.28□□□□□ -1.88
PDLIM5-218ENST00000513341 HSP90AA4PQ58FG1 418 aa3.28□□□□□ -1.88
PDLIM5-218ENST00000513341 ODF2Q5BJF6 829 aa3.28□□□□□ -1.88
PDLIM5-218ENST00000513341 OR2A2Q6IF42 318 aa3.28□□□□□ -1.88
PDLIM5-218ENST00000513341 CAPN13Q6MZZ7 669 aaPredicted RBP3.28□□□□□ -1.88
PDLIM5-218ENST00000513341 ZNF704Q6ZNC4 412 aaPredicted RBP3.28□□□□□ -1.88
PDLIM5-218ENST00000513341 RINLQ6ZS11 566 aa3.28□□□□□ -1.88
PDLIM5-218ENST00000513341 Q6ZWC4 215 aa3.28□□□□□ -1.88
PDLIM5-218ENST00000513341 PRSS41Q7RTY9 318 aa3.28□□□□□ -1.88
PDLIM5-218ENST00000513341 LUZP2Q86TE4 346 aa3.28□□□□□ -1.88
PDLIM5-218ENST00000513341 ASPGQ86U10 573 aa3.28□□□□□ -1.88
PDLIM5-218ENST00000513341 LRRC6Q86X45 466 aa3.28□□□□□ -1.88
PDLIM5-218ENST00000513341 RFX6Q8HWS3 928 aa3.28□□□□□ -1.88
PDLIM5-218ENST00000513341 KLHDC8BQ8IXV7 354 aa3.28□□□□□ -1.88
PDLIM5-218ENST00000513341 LRRC17Q8N6Y2 441 aa3.28□□□□□ -1.88
PDLIM5-218ENST00000513341 OR4L1Q8NH43 312 aa3.28□□□□□ -1.88
PDLIM5-218ENST00000513341 SLC22A8Q8TCC7 542 aa3.28□□□□□ -1.88
PDLIM5-218ENST00000513341 PAQR8Q8TEZ7 354 aa3.28□□□□□ -1.88
PDLIM5-218ENST00000513341 PROX1Q92786 737 aa3.28□□□□□ -1.88
PDLIM5-218ENST00000513341 P3H4Q92791 437 aa3.28□□□□□ -1.88
PDLIM5-218ENST00000513341 DAZLQ92904 295 aaKnown RBP3.28□□□□□ -1.88
PDLIM5-218ENST00000513341 NCLNQ969V3 563 aa3.28□□□□□ -1.88
PDLIM5-218ENST00000513341 MUL1Q969V5 352 aa3.28□□□□□ -1.88
PDLIM5-218ENST00000513341 R3HDM4Q96D70 268 aa3.28□□□□□ -1.88
PDLIM5-218ENST00000513341 C11orf24Q96F05 449 aaPredicted RBP3.28□□□□□ -1.88
PDLIM5-218ENST00000513341 WDYHV1Q96HA8 205 aa3.28□□□□□ -1.88
PDLIM5-218ENST00000513341 DNAJC1Q96KC8 554 aaKnown RBP3.28□□□□□ -1.88
PDLIM5-218ENST00000513341 TMEM204Q9BSN7 226 aa3.28□□□□□ -1.88
PDLIM5-218ENST00000513341 MED18Q9BUE0 208 aa3.28□□□□□ -1.88
PDLIM5-218ENST00000513341 PCDHAC1Q9H158 963 aa3.28□□□□□ -1.88
PDLIM5-218ENST00000513341 GBA3Q9H227 469 aa3.28□□□□□ -1.88
PDLIM5-218ENST00000513341 SH2D2AQ9NP31 389 aa3.28□□□□□ -1.88
PDLIM5-218ENST00000513341 FANCFQ9NPI8 374 aa3.28□□□□□ -1.88
PDLIM5-218ENST00000513341 SEMA4BQ9NPR2 832 aaPredicted RBP3.28□□□□□ -1.88
PDLIM5-218ENST00000513341 KLHL28Q9NXS3 571 aa3.28□□□□□ -1.88
PDLIM5-218ENST00000513341 LIMA1Q9UHB6 759 aaKnown RBP3.28□□□□□ -1.88
PDLIM5-218ENST00000513341 CIDEBQ9UHD4 219 aa3.28□□□□□ -1.88
PDLIM5-218ENST00000513341 ANAPC5Q9UJX4 755 aa3.28□□□□□ -1.88
PDLIM5-218ENST00000513341 ZNF223Q9UK11 482 aaPredicted RBP3.28□□□□□ -1.88
PDLIM5-218ENST00000513341 AMFRQ9UKV5 643 aa3.28□□□□□ -1.88
PDLIM5-218ENST00000513341 NFU1Q9UMS0 254 aa3.28□□□□□ -1.88
PDLIM5-218ENST00000513341 LAMP3Q9UQV4 416 aa3.28□□□□□ -1.88
PDLIM5-218ENST00000513341 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.28□□□□□ -1.883e-6■■□□□ 11.9
PDLIM5-218ENST00000513341 CLCA3PQ9Y6N3 262 aa3.28□□□□□ -1.88
PDLIM5-218ENST00000513341 MED12LQ86YW9 2145 aa3.28□□□□□ -1.89
PDLIM5-218ENST00000513341 NCKAP5O14513 1909 aa3.27□□□□□ -1.89
PDLIM5-218ENST00000513341 A0A087WV62 115 aa3.27□□□□□ -1.89
PDLIM5-218ENST00000513341 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.27□□□□□ -1.89
PDLIM5-218ENST00000513341 A0A0G2JMM0 328 aa3.27□□□□□ -1.89
PDLIM5-218ENST00000513341 A0A1W2PPB8 328 aa3.27□□□□□ -1.89
PDLIM5-218ENST00000513341 A0A1W2PRS3 328 aa3.27□□□□□ -1.89
PDLIM5-218ENST00000513341 LRRC53A6NM62 1247 aa3.27□□□□□ -1.89
PDLIM5-218ENST00000513341 LGALS16A8MUM7 142 aa3.27□□□□□ -1.89
PDLIM5-218ENST00000513341 KIR3DP1A8MWS1 328 aa3.27□□□□□ -1.89
PDLIM5-218ENST00000513341 KDM4EB2RXH2 506 aaPredicted RBP3.27□□□□□ -1.89
PDLIM5-218ENST00000513341 PSMD12O00232 456 aaPredicted RBP3.27□□□□□ -1.89
PDLIM5-218ENST00000513341 WWP2O00308 870 aa3.27□□□□□ -1.89
PDLIM5-218ENST00000513341 CCL22O00626 93 aa3.27□□□□□ -1.89
PDLIM5-218ENST00000513341 UBFD1O14562 309 aaKnown RBP3.27□□□□□ -1.89
PDLIM5-218ENST00000513341 PRMT5O14744 637 aaPredicted RBP3.27□□□□□ -1.89
PDLIM5-218ENST00000513341 HAT1O14929 419 aa3.27□□□□□ -1.89
PDLIM5-218ENST00000513341 PSMD3O43242 534 aa3.27□□□□□ -1.89
PDLIM5-218ENST00000513341 OR1I1O60431 355 aa3.27□□□□□ -1.89
PDLIM5-218ENST00000513341 CST8O60676 142 aa3.27□□□□□ -1.89
PDLIM5-218ENST00000513341 CDH16O75309 829 aa3.27□□□□□ -1.89
PDLIM5-218ENST00000513341 TRIM3O75382 744 aaPredicted RBP3.27□□□□□ -1.89
PDLIM5-218ENST00000513341 PSIP1O75475 530 aaKnown RBP3.27□□□□□ -1.89
PDLIM5-218ENST00000513341 TNFSF13O75888 250 aa3.27□□□□□ -1.89
PDLIM5-218ENST00000513341 CATP04040 527 aaKnown RBP3.27□□□□□ -1.89
PDLIM5-218ENST00000513341 H2AFZP0C0S5 128 aa3.27□□□□□ -1.89
PDLIM5-218ENST00000513341 RFPL3SP0C7P2 107 aa3.27□□□□□ -1.89
PDLIM5-218ENST00000513341 DANCRP0C864 163 aa3.27□□□□□ -1.89
PDLIM5-218ENST00000513341 PRSS56P0CW18 603 aa3.27□□□□□ -1.89
PDLIM5-218ENST00000513341 CCL3P10147 92 aa3.27□□□□□ -1.89
PDLIM5-218ENST00000513341 POU2F1P14859 743 aa3.27□□□□□ -1.89
PDLIM5-218ENST00000513341 MAOAP21397 527 aa3.27□□□□□ -1.89
PDLIM5-218ENST00000513341 TBXA2RP21731 343 aa3.27□□□□□ -1.89
PDLIM5-218ENST00000513341 RPS3P23396 243 aaKnown RBP eCLIP3.27□□□□□ -1.89
PDLIM5-218ENST00000513341 FOXN2P32314 431 aa3.27□□□□□ -1.89
PDLIM5-218ENST00000513341 GCKP35557 465 aa3.27□□□□□ -1.89
PDLIM5-218ENST00000513341 ACVR1BP36896 505 aa3.27□□□□□ -1.89
PDLIM5-218ENST00000513341 PIGAP37287 484 aa3.27□□□□□ -1.89
PDLIM5-218ENST00000513341 TTPAP49638 278 aa3.27□□□□□ -1.89
PDLIM5-218ENST00000513341 CDK9P50750 372 aaKnown RBP3.27□□□□□ -1.89
PDLIM5-218ENST00000513341 ACVR1Q04771 509 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms