RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 TCP10LQ8TDR4 215 aa8.1□□□□□ -1.11
NUP54-211ENST00000512151 ESAMQ96AP7 390 aa8.1□□□□□ -1.11
NUP54-211ENST00000512151 OMA1Q96E52 524 aa8.1□□□□□ -1.11
NUP54-211ENST00000512151 APOPT1Q96IL0 206 aa8.1□□□□□ -1.11
NUP54-211ENST00000512151 KCNC2Q96PR1 638 aa8.1□□□□□ -1.11
NUP54-211ENST00000512151 ZNF747Q9BV97 191 aa8.1□□□□□ -1.11
NUP54-211ENST00000512151 CBLN4Q9NTU7 201 aa8.1□□□□□ -1.11
NUP54-211ENST00000512151 FAIMQ9NVQ4 179 aa8.1□□□□□ -1.11
NUP54-211ENST00000512151 CPSF2Q9P2I0 782 aaKnown RBP8.1□□□□□ -1.11
NUP54-211ENST00000512151 XPR1Q9UBH6 696 aa8.1□□□□□ -1.11
NUP54-211ENST00000512151 TMEFF2Q9UIK5 374 aaPredicted RBP8.1□□□□□ -1.11
NUP54-211ENST00000512151 EMC9Q9Y3B6 208 aa8.1□□□□□ -1.11
NUP54-211ENST00000512151 MRPS18CQ9Y3D5 142 aaKnown RBP8.1□□□□□ -1.11
NUP54-211ENST00000512151 OARD1Q9Y530 152 aa8.1□□□□□ -1.11
NUP54-211ENST00000512151 ARFGEF3Q5TH69 2177 aa8.09□□□□□ -1.11
NUP54-211ENST00000512151 NCF1BA6NI72 391 aaPredicted RBP8.09□□□□□ -1.12
NUP54-211ENST00000512151 NCF1CA8MVU1 366 aaPredicted RBP8.09□□□□□ -1.12
NUP54-211ENST00000512151 G3V2L1 256 aa8.09□□□□□ -1.12
NUP54-211ENST00000512151 H7C417 338 aa8.09□□□□□ -1.12
NUP54-211ENST00000512151 SAP18O00422 153 aaKnown RBP8.09□□□□□ -1.12
NUP54-211ENST00000512151 PLIN3O60664 434 aa8.09□□□□□ -1.12
NUP54-211ENST00000512151 KERAO60938 352 aa8.09□□□□□ -1.12
NUP54-211ENST00000512151 SS18L1O75177 396 aaPredicted RBP8.09□□□□□ -1.12
NUP54-211ENST00000512151 GPR75O95800 540 aa8.09□□□□□ -1.12
NUP54-211ENST00000512151 FESP07332 822 aa8.09□□□□□ -1.12
NUP54-211ENST00000512151 NCF1P14598 390 aaPredicted RBP8.09□□□□□ -1.12
NUP54-211ENST00000512151 S1PR1P21453 382 aa8.09□□□□□ -1.12
NUP54-211ENST00000512151 GSTM2P28161 218 aa8.09□□□□□ -1.12
NUP54-211ENST00000512151 IL2RGP31785 369 aa8.09□□□□□ -1.12
NUP54-211ENST00000512151 TTKP33981 857 aa8.09□□□□□ -1.12
NUP54-211ENST00000512151 ETV4P43268 484 aa8.09□□□□□ -1.12
NUP54-211ENST00000512151 TNFRSF17Q02223 184 aa8.09□□□□□ -1.12
NUP54-211ENST00000512151 LGALS3BPQ08380 585 aa8.09□□□□□ -1.12
NUP54-211ENST00000512151 SLAMF1Q13291 335 aa8.09□□□□□ -1.12
NUP54-211ENST00000512151 P2RY6Q15077 328 aa8.09□□□□□ -1.12
NUP54-211ENST00000512151 TGFBIQ15582 683 aa8.09□□□□□ -1.12
NUP54-211ENST00000512151 TSNAXIP1Q2TAA8 658 aa8.09□□□□□ -1.12
NUP54-211ENST00000512151 FBXO48Q5FWF7 155 aa8.09□□□□□ -1.12
NUP54-211ENST00000512151 B3GLCTQ6Y288 498 aa8.09□□□□□ -1.12
NUP54-211ENST00000512151 BEND4Q6ZU67 534 aa8.09□□□□□ -1.12
NUP54-211ENST00000512151 CNPY4Q8N129 248 aa8.09□□□□□ -1.12
NUP54-211ENST00000512151 RHEBL1Q8TAI7 183 aa8.09□□□□□ -1.12
NUP54-211ENST00000512151 STAG3L4Q8TBR4 150 aa8.09□□□□□ -1.12
NUP54-211ENST00000512151 TANKQ92844 425 aa8.09□□□□□ -1.12
NUP54-211ENST00000512151 EXT2Q93063 718 aa8.09□□□□□ -1.12
NUP54-211ENST00000512151 TMEM79Q9BSE2 394 aa8.09□□□□□ -1.12
NUP54-211ENST00000512151 TBCDQ9BTW9 1192 aa8.09□□□□□ -1.12
NUP54-211ENST00000512151 OR10A5Q9H207 317 aa8.09□□□□□ -1.12
NUP54-211ENST00000512151 C12orf49Q9H741 205 aa8.09□□□□□ -1.12
NUP54-211ENST00000512151 METTL17Q9H7H0 456 aaPredicted RBP8.09□□□□□ -1.12
NUP54-211ENST00000512151 CXorf21Q9HAI6 301 aa8.09□□□□□ -1.12
NUP54-211ENST00000512151 SSU72Q9NP77 194 aaKnown RBP8.09□□□□□ -1.12
NUP54-211ENST00000512151 DNAJC11Q9NVH1 559 aa8.09□□□□□ -1.12
NUP54-211ENST00000512151 NPAP1Q9NZP6 1156 aa8.09□□□□□ -1.12
NUP54-211ENST00000512151 SENP1Q9P0U3 644 aa8.09□□□□□ -1.12
NUP54-211ENST00000512151 GRID1Q9ULK0 1009 aa8.09□□□□□ -1.12
NUP54-211ENST00000512151 PLLPQ9Y342 182 aa8.09□□□□□ -1.12
NUP54-211ENST00000512151 ACTL7BQ9Y614 415 aa8.09□□□□□ -1.12
NUP54-211ENST00000512151 LRP5LA4QPB2 252 aa8.08□□□□□ -1.12
NUP54-211ENST00000512151 EEDO75530 441 aaKnown RBP8.08□□□□□ -1.12
NUP54-211ENST00000512151 WDR47O94967 919 aa8.08□□□□□ -1.12
NUP54-211ENST00000512151 ENO2P09104 434 aaPredicted RBP8.08□□□□□ -1.12
NUP54-211ENST00000512151 RBP1P09455 135 aa8.08□□□□□ -1.12
NUP54-211ENST00000512151 CSF3P09919 207 aa8.08□□□□□ -1.12
NUP54-211ENST00000512151 NAGAP17050 411 aa8.08□□□□□ -1.12
NUP54-211ENST00000512151 GNAZP19086 355 aa8.08□□□□□ -1.12
NUP54-211ENST00000512151 BUD31P41223 144 aaPredicted RBP8.08□□□□□ -1.12
NUP54-211ENST00000512151 CCT5P48643 541 aa8.08□□□□□ -1.12
NUP54-211ENST00000512151 EFNA4P52798 201 aa8.08□□□□□ -1.12
NUP54-211ENST00000512151 GAS1P54826 345 aa8.08□□□□□ -1.12
NUP54-211ENST00000512151 GNGT1P63211 74 aa8.08□□□□□ -1.12
NUP54-211ENST00000512151 CDKL1Q00532 357 aa8.08□□□□□ -1.12
NUP54-211ENST00000512151 TGM3Q08188 693 aa8.08□□□□□ -1.12
NUP54-211ENST00000512151 SPOCK1Q08629 439 aa8.08□□□□□ -1.12
NUP54-211ENST00000512151 BIKQ13323 160 aa8.08□□□□□ -1.12
NUP54-211ENST00000512151 MFSD12Q6NUT3 480 aa8.08□□□□□ -1.12
NUP54-211ENST00000512151 SHISA2Q6UWI4 295 aa8.08□□□□□ -1.12
NUP54-211ENST00000512151 RINLQ6ZS11 566 aa8.08□□□□□ -1.12
NUP54-211ENST00000512151 ADAMTSL2Q86TH1 951 aa8.08□□□□□ -1.12
NUP54-211ENST00000512151 LCA5Q86VQ0 697 aa8.08□□□□□ -1.12
NUP54-211ENST00000512151 GABRG1Q8N1C3 465 aa8.08□□□□□ -1.12
NUP54-211ENST00000512151 KRT78Q8N1N4 520 aa8.08□□□□□ -1.12
NUP54-211ENST00000512151 RNF175Q8N4F7 328 aa8.08□□□□□ -1.12
NUP54-211ENST00000512151 METTL25Q8N6Q8 603 aa8.08□□□□□ -1.12
NUP54-211ENST00000512151 PDPRQ8NCN5 879 aa8.08□□□□□ -1.12
NUP54-211ENST00000512151 C17orf47Q8NEP4 570 aa8.08□□□□□ -1.12
NUP54-211ENST00000512151 GMPPAQ96IJ6 420 aaPredicted RBP8.08□□□□□ -1.12
NUP54-211ENST00000512151 FOXN4Q96NZ1 517 aa8.08□□□□□ -1.12
NUP54-211ENST00000512151 MRPL57Q9BQC6 102 aaKnown RBP8.08□□□□□ -1.12
NUP54-211ENST00000512151 PELOQ9BRX2 385 aaKnown RBP8.08□□□□□ -1.12
NUP54-211ENST00000512151 MS4A8Q9BY19 250 aa8.08□□□□□ -1.12
NUP54-211ENST00000512151 ITPAQ9BY32 194 aa8.08□□□□□ -1.12
NUP54-211ENST00000512151 TRIM54Q9BYV2 358 aa8.08□□□□□ -1.12
NUP54-211ENST00000512151 ROGDIQ9GZN7 287 aa8.08□□□□□ -1.12
NUP54-211ENST00000512151 MRPL46Q9H2W6 279 aaKnown RBP8.08□□□□□ -1.12
NUP54-211ENST00000512151 FBXO34Q9NWN3 711 aa8.08□□□□□ -1.12
NUP54-211ENST00000512151 SPACA6W5XKT8 324 aa8.08□□□□□ -1.12
NUP54-211ENST00000512151 A8MT66 165 aa8.07□□□□□ -1.12
NUP54-211ENST00000512151 SUPT3HB4E1H0 165 aa8.07□□□□□ -1.12
NUP54-211ENST00000512151 H3BML4 177 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms