RNA–Protein interactions for RNA: ENST00000512107.5

MATR3-238, Transcript of matrin 3, human

TSL 4

Gene MATR3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-238	ENST00000512107	TUBA8	Q9NY65	449 aa	Predicted RBP	13.32	□□□□□ -0.28
MATR3-238	ENST00000512107	PCDHGB7	Q9Y5F8	929 aa		13.32	□□□□□ -0.28
MATR3-238	ENST00000512107	IGSF10	Q6WRI0	2623 aa		13.32	□□□□□ -0.28
MATR3-238	ENST00000512107	DSPP	Q9NZW4	1301 aa		13.32	□□□□□ -0.28
MATR3-238	ENST00000512107	LRRC3C	A6NJW4	275 aa		13.31	□□□□□ -0.28
MATR3-238	ENST00000512107	DUXA	A6NLW8	204 aa		13.31	□□□□□ -0.28
MATR3-238	ENST00000512107	EIF4E1B	A6NMX2	242 aa	Known RBP	13.31	□□□□□ -0.28
MATR3-238	ENST00000512107	EVPLL	A8MZ36	301 aa		13.31	□□□□□ -0.28
MATR3-238	ENST00000512107	SCO2	O43819	266 aa		13.31	□□□□□ -0.28
MATR3-238	ENST00000512107	EPPIN	O95925	133 aa		13.31	□□□□□ -0.28
MATR3-238	ENST00000512107	PRB1	P04280	392 aa		13.31	□□□□□ -0.28
MATR3-238	ENST00000512107	RFPL3S	P0C7P2	107 aa		13.31	□□□□□ -0.28
MATR3-238	ENST00000512107	NR2F1	P10589	423 aa		13.31	□□□□□ -0.28
MATR3-238	ENST00000512107	RPS4Y1	P22090	263 aa	Known RBP	13.31	□□□□□ -0.28
MATR3-238	ENST00000512107	CALB2	P22676	271 aa		13.31	□□□□□ -0.28
MATR3-238	ENST00000512107	PPIB	P23284	216 aa	Known RBP	13.31	□□□□□ -0.28
MATR3-238	ENST00000512107	IL12B	P29460	328 aa		13.31	□□□□□ -0.28
MATR3-238	ENST00000512107	EVI2B	P34910	448 aa		13.31	□□□□□ -0.28
MATR3-238	ENST00000512107	MSX2	P35548	267 aa	Predicted RBP	13.31	□□□□□ -0.28
MATR3-238	ENST00000512107	DCT	P40126	519 aa		13.31	□□□□□ -0.28
MATR3-238	ENST00000512107	FOXO1	Q12778	655 aa		13.31	□□□□□ -0.28
MATR3-238	ENST00000512107	CEACAM7	Q14002	265 aa		13.31	□□□□□ -0.28
MATR3-238	ENST00000512107	KLHL26	Q53HC5	615 aa		13.31	□□□□□ -0.28
MATR3-238	ENST00000512107	PDZK1	Q5T2W1	519 aa		13.31	□□□□□ -0.28
MATR3-238	ENST00000512107	SLC22A10	Q63ZE4	541 aa		13.31	□□□□□ -0.28
MATR3-238	ENST00000512107	PNPLA5	Q7Z6Z6	429 aa	Predicted RBP	13.31	□□□□□ -0.28
MATR3-238	ENST00000512107	GPALPP1	Q8IXQ4	340 aa		13.31	□□□□□ -0.28
MATR3-238	ENST00000512107	PGAM4	Q8N0Y7	254 aa		13.31	□□□□□ -0.28
MATR3-238	ENST00000512107	FBXW8	Q8N3Y1	598 aa		13.31	□□□□□ -0.28
MATR3-238	ENST00000512107	GOLM1	Q8NBJ4	401 aa		13.31	□□□□□ -0.28
MATR3-238	ENST00000512107	CLPTM1L	Q96KA5	538 aa		13.31	□□□□□ -0.28
MATR3-238	ENST00000512107	TRNT1	Q96Q11	434 aa	Known RBP	13.31	□□□□□ -0.28
MATR3-238	ENST00000512107	HOPX	Q9BPY8	73 aa	Predicted RBP	13.31	□□□□□ -0.28
MATR3-238	ENST00000512107	WFDC6	Q9BQY6	131 aa		13.31	□□□□□ -0.28
MATR3-238	ENST00000512107	ANGPTL4	Q9BY76	406 aa		13.31	□□□□□ -0.28
MATR3-238	ENST00000512107	TMEM38A	Q9H6F2	299 aa		13.31	□□□□□ -0.28
MATR3-238	ENST00000512107	ABI3	Q9P2A4	366 aa		13.31	□□□□□ -0.28
MATR3-238	ENST00000512107	CD300A	Q9UGN4	299 aa		13.31	□□□□□ -0.28
MATR3-238	ENST00000512107	PCDHGA10	Q9Y5H3	936 aa		13.31	□□□□□ -0.28
MATR3-238	ENST00000512107	PRAMEF25	A6NGN4	478 aa		13.3	□□□□□ -0.28
MATR3-238	ENST00000512107	FAM220BP	B1ANY3	271 aa		13.3	□□□□□ -0.28
MATR3-238	ENST00000512107	ATXN7	O15265	892 aa	Predicted RBP	13.3	□□□□□ -0.28
MATR3-238	ENST00000512107	PEX1	O43933	1283 aa		13.3	□□□□□ -0.28
MATR3-238	ENST00000512107	TPST1	O60507	370 aa		13.3	□□□□□ -0.28
MATR3-238	ENST00000512107	ADAM11	O75078	769 aa		13.3	□□□□□ -0.28
MATR3-238	ENST00000512107	TRIM3	O75382	744 aa	Predicted RBP	13.3	□□□□□ -0.28
MATR3-238	ENST00000512107	PGM3	O95394	542 aa		13.3	□□□□□ -0.28
MATR3-238	ENST00000512107	TBXA2R	P21731	343 aa		13.3	□□□□□ -0.28
MATR3-238	ENST00000512107	AQP1	P29972	269 aa		13.3	□□□□□ -0.28
MATR3-238	ENST00000512107	MEOX1	P50221	254 aa		13.3	□□□□□ -0.28
MATR3-238	ENST00000512107	PCBP3	P57721	371 aa	Known RBP	13.3	□□□□□ -0.28
MATR3-238	ENST00000512107	CDK6	Q00534	326 aa		13.3	□□□□□ -0.28
MATR3-238	ENST00000512107	SCARB2	Q14108	478 aa		13.3	□□□□□ -0.28
MATR3-238	ENST00000512107	ZNF169	Q14929	603 aa	Predicted RBP	13.3	□□□□□ -0.28
MATR3-238	ENST00000512107	ZNF141	Q15928	474 aa		13.3	□□□□□ -0.28
MATR3-238	ENST00000512107	GLIPR1L2	Q4G1C9	344 aa		13.3	□□□□□ -0.28
MATR3-238	ENST00000512107	FLYWCH1	Q4VC44	716 aa		13.3	□□□□□ -0.28
MATR3-238	ENST00000512107	OR5M10	Q6IEU7	315 aa		13.3	□□□□□ -0.28
MATR3-238	ENST00000512107	LRRC74B	Q6ZQY2	392 aa		13.3	□□□□□ -0.28
MATR3-238	ENST00000512107	SERPINA11	Q86U17	422 aa		13.3	□□□□□ -0.28
MATR3-238	ENST00000512107	IFNE	Q86WN2	208 aa		13.3	□□□□□ -0.28
MATR3-238	ENST00000512107	VRK2	Q86Y07	508 aa		13.3	□□□□□ -0.28
MATR3-238	ENST00000512107	WDSUB1	Q8N9V3	476 aa		13.3	□□□□□ -0.28
MATR3-238	ENST00000512107	OR2M7	Q8NG81	312 aa		13.3	□□□□□ -0.28
MATR3-238	ENST00000512107	SGCZ	Q96LD1	299 aa		13.3	□□□□□ -0.28
MATR3-238	ENST00000512107	CDRT15	Q96T59	188 aa		13.3	□□□□□ -0.28
MATR3-238	ENST00000512107	NPAS1	Q99742	590 aa		13.3	□□□□□ -0.28
MATR3-238	ENST00000512107	TREX2	Q9BQ50	279 aa	Predicted RBP	13.3	□□□□□ -0.28
MATR3-238	ENST00000512107	EXD2	Q9NVH0	621 aa		13.3	□□□□□ -0.28
MATR3-238	ENST00000512107	P2RX2	Q9UBL9	471 aa		13.3	□□□□□ -0.28
MATR3-238	ENST00000512107	WDR45	Q9Y484	360 aa		13.3	□□□□□ -0.28
MATR3-238	ENST00000512107	ZNHIT1	O43257	154 aa		13.29	□□□□□ -0.28
MATR3-238	ENST00000512107	DPM1	O60762	260 aa		13.29	□□□□□ -0.28
MATR3-238	ENST00000512107	DNAJA2	O60884	412 aa		13.29	□□□□□ -0.28
MATR3-238	ENST00000512107	STX11	O75558	287 aa		13.29	□□□□□ -0.28
MATR3-238	ENST00000512107	NCK1	P16333	377 aa		13.29	□□□□□ -0.28
MATR3-238	ENST00000512107	CNR1	P21554	472 aa		13.29	□□□□□ -0.28
MATR3-238	ENST00000512107	CASR	P41180	1078 aa		13.29	□□□□□ -0.28
MATR3-238	ENST00000512107	MAGEA8	P43361	318 aa		13.29	□□□□□ -0.28
MATR3-238	ENST00000512107	ATP12A	P54707	1039 aa		13.29	□□□□□ -0.28
MATR3-238	ENST00000512107	NCALD	P61601	193 aa		13.29	□□□□□ -0.28
MATR3-238	ENST00000512107	FOXK1	P85037	733 aa		13.29	□□□□□ -0.28
MATR3-238	ENST00000512107	EFR3A	Q14156	821 aa		13.29	□□□□□ -0.28
MATR3-238	ENST00000512107	CYP51A1	Q16850	503 aa		13.29	□□□□□ -0.28
MATR3-238	ENST00000512107	VMAC	Q2NL98	169 aa		13.29	□□□□□ -0.28
MATR3-238	ENST00000512107	ATAD3B	Q5T9A4	648 aa		13.29	□□□□□ -0.28
MATR3-238	ENST00000512107	MICU2	Q8IYU8	434 aa		13.29	□□□□□ -0.28
MATR3-238	ENST00000512107	ZNF619	Q8N2I2	560 aa		13.29	□□□□□ -0.28
MATR3-238	ENST00000512107	WBP1	Q96G27	269 aa		13.29	□□□□□ -0.28
MATR3-238	ENST00000512107	RAD21L1	Q9H4I0	556 aa		13.29	□□□□□ -0.28
MATR3-238	ENST00000512107	BCL2L10	Q9HD36	194 aa		13.29	□□□□□ -0.28
MATR3-238	ENST00000512107	TIMMDC1	Q9NPL8	285 aa		13.29	□□□□□ -0.28
MATR3-238	ENST00000512107	SACM1L	Q9NTJ5	587 aa		13.29	□□□□□ -0.28
MATR3-238	ENST00000512107	FBXL2	Q9UKC9	423 aa		13.29	□□□□□ -0.28
MATR3-238	ENST00000512107	B3GNT3	Q9Y2A9	372 aa		13.29	□□□□□ -0.28
MATR3-238	ENST00000512107	TRAV17	A0A0B4J275	112 aa		13.28	□□□□□ -0.28
MATR3-238	ENST00000512107	AGAP5	A6NIR3	686 aa		13.28	□□□□□ -0.28
MATR3-238	ENST00000512107	GNB5	O14775	395 aa		13.28	□□□□□ -0.28
MATR3-238	ENST00000512107	GMFG	O60234	142 aa		13.28	□□□□□ -0.28
MATR3-238	ENST00000512107	C1QL1	O75973	258 aa		13.28	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms