RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 PTGES2Q9H7Z7 377 aa16.89■□□□□ 0.29
HMGCS1-206ENST00000511774 PFDN4Q9NQP4 134 aa16.89■□□□□ 0.29
HMGCS1-206ENST00000511774 FAM120CQ9NX05 1096 aaKnown RBP16.89■□□□□ 0.29
HMGCS1-206ENST00000511774 RNF14Q9UBS8 474 aa16.89■□□□□ 0.29
HMGCS1-206ENST00000511774 LPAR3Q9UBY5 353 aa16.89■□□□□ 0.29
HMGCS1-206ENST00000511774 ABCG2Q9UNQ0 655 aa16.89■□□□□ 0.29
HMGCS1-206ENST00000511774 ADAMDEC1O15204 470 aa16.88■□□□□ 0.29
HMGCS1-206ENST00000511774 PLOD3O60568 738 aa16.88■□□□□ 0.29
HMGCS1-206ENST00000511774 C2P06681 752 aa16.88■□□□□ 0.29
HMGCS1-206ENST00000511774 IL3P08700 152 aa16.88■□□□□ 0.29
HMGCS1-206ENST00000511774 PSMA4P25789 261 aaKnown RBP16.88■□□□□ 0.29
HMGCS1-206ENST00000511774 NUDT6P53370 316 aa16.88■□□□□ 0.29
HMGCS1-206ENST00000511774 ZNF155Q12901 538 aaPredicted RBP16.88■□□□□ 0.29
HMGCS1-206ENST00000511774 ERCC6LQ2NKX8 1250 aa16.88■□□□□ 0.29
HMGCS1-206ENST00000511774 TTC19Q6DKK2 380 aaPredicted RBP16.88■□□□□ 0.29
HMGCS1-206ENST00000511774 C3orf62Q6ZUJ4 267 aa16.88■□□□□ 0.29
HMGCS1-206ENST00000511774 CYS1Q717R9 158 aa16.88■□□□□ 0.29
HMGCS1-206ENST00000511774 STK32CQ86UX6 486 aa16.88■□□□□ 0.29
HMGCS1-206ENST00000511774 PTGR2Q8N8N7 351 aaPredicted RBP16.88■□□□□ 0.29
HMGCS1-206ENST00000511774 OR4F6Q8NGB9 312 aa16.88■□□□□ 0.29
HMGCS1-206ENST00000511774 ABHD3Q8WU67 409 aa16.88■□□□□ 0.29
HMGCS1-206ENST00000511774 ERP27Q96DN0 273 aa16.88■□□□□ 0.29
HMGCS1-206ENST00000511774 MTBPQ96DY7 904 aa16.88■□□□□ 0.29
HMGCS1-206ENST00000511774 CACNG6Q9BXT2 260 aa16.88■□□□□ 0.29
HMGCS1-206ENST00000511774 ALG2Q9H553 416 aa16.88■□□□□ 0.29
HMGCS1-206ENST00000511774 TMEM185BQ9H7F4 350 aa16.88■□□□□ 0.29
HMGCS1-206ENST00000511774 SDHAF3Q9NRP4 125 aa16.88■□□□□ 0.29
HMGCS1-206ENST00000511774 PCTPQ9UKL6 214 aa16.88■□□□□ 0.29
HMGCS1-206ENST00000511774 MCTS1Q9ULC4 181 aaKnown RBP16.88■□□□□ 0.29
HMGCS1-206ENST00000511774 LMX1BO60663 402 aa16.87■□□□□ 0.29
HMGCS1-206ENST00000511774 TUBBP07437 444 aa16.87■□□□□ 0.29
HMGCS1-206ENST00000511774 SRD5A1P18405 259 aa16.87■□□□□ 0.29
HMGCS1-206ENST00000511774 SHC1P29353 583 aa16.87■□□□□ 0.29
HMGCS1-206ENST00000511774 RAE1P78406 368 aaKnown RBP16.87■□□□□ 0.29
HMGCS1-206ENST00000511774 MRPS22P82650 360 aaKnown RBP16.87■□□□□ 0.29
HMGCS1-206ENST00000511774 IFT88Q13099 833 aa16.87■□□□□ 0.29
HMGCS1-206ENST00000511774 CYB5R2Q6BCY4 276 aa16.87■□□□□ 0.29
HMGCS1-206ENST00000511774 CEP112Q8N8E3 955 aa16.87■□□□□ 0.29
HMGCS1-206ENST00000511774 OR2V1Q8NHB1 315 aa16.87■□□□□ 0.29
HMGCS1-206ENST00000511774 HSD17B8Q92506 261 aa16.87■□□□□ 0.29
HMGCS1-206ENST00000511774 SLC9A6Q92581 669 aa16.87■□□□□ 0.29
HMGCS1-206ENST00000511774 ATP6V1E2Q96A05 226 aa16.87■□□□□ 0.29
HMGCS1-206ENST00000511774 PHF21BQ96EK2 531 aa16.87■□□□□ 0.29
HMGCS1-206ENST00000511774 FAIM2Q9BWQ8 316 aa16.87■□□□□ 0.29
HMGCS1-206ENST00000511774 FANCFQ9NPI8 374 aa16.87■□□□□ 0.29
HMGCS1-206ENST00000511774 GLRX2Q9NS18 164 aa16.87■□□□□ 0.29
HMGCS1-206ENST00000511774 NPAP1Q9NZP6 1156 aa16.87■□□□□ 0.29
HMGCS1-206ENST00000511774 TNPO3Q9Y5L0 923 aaKnown RBP16.87■□□□□ 0.29
HMGCS1-206ENST00000511774 PKD1L1Q8TDX9 2849 aa16.86■□□□□ 0.29
HMGCS1-206ENST00000511774 GOLGA6L6A8MZA4 724 aa16.86■□□□□ 0.29
HMGCS1-206ENST00000511774 ZNF814B7Z6K7 855 aa16.86■□□□□ 0.29
HMGCS1-206ENST00000511774 ANGPTL1O95841 491 aa16.86■□□□□ 0.29
HMGCS1-206ENST00000511774 ADAP00813 363 aa16.86■□□□□ 0.29
HMGCS1-206ENST00000511774 IGKV1D-16P01601 117 aa16.86■□□□□ 0.29
HMGCS1-206ENST00000511774 CHN1P15882 459 aa16.86■□□□□ 0.29
HMGCS1-206ENST00000511774 IL32P24001 234 aa16.86■□□□□ 0.29
HMGCS1-206ENST00000511774 CDH11P55287 796 aa16.86■□□□□ 0.29
HMGCS1-206ENST00000511774 PSPHP78330 225 aa16.86■□□□□ 0.29
HMGCS1-206ENST00000511774 ACAP2Q15057 778 aa16.86■□□□□ 0.29
HMGCS1-206ENST00000511774 NRF1Q16656 503 aa16.86■□□□□ 0.29
HMGCS1-206ENST00000511774 TECRLQ5HYJ1 363 aa16.86■□□□□ 0.29
HMGCS1-206ENST00000511774 TCHHL1Q5QJ38 904 aaPredicted RBP16.86■□□□□ 0.29
HMGCS1-206ENST00000511774 LETMD1Q6P1Q0 360 aa16.86■□□□□ 0.29
HMGCS1-206ENST00000511774 CLEC2AQ6UVW9 174 aa16.86■□□□□ 0.29
HMGCS1-206ENST00000511774 PLD6Q8N2A8 252 aaKnown RBP16.86■□□□□ 0.29
HMGCS1-206ENST00000511774 POC1BQ8TC44 478 aa16.86■□□□□ 0.29
HMGCS1-206ENST00000511774 HDHD5Q9BXW7 423 aa16.86■□□□□ 0.29
HMGCS1-206ENST00000511774 PLA2G12AQ9BZM1 189 aa16.86■□□□□ 0.29
HMGCS1-206ENST00000511774 ZNF225Q9UK10 706 aa16.86■□□□□ 0.29
HMGCS1-206ENST00000511774 ARFGEF3Q5TH69 2177 aa16.86■□□□□ 0.29
HMGCS1-206ENST00000511774 UBFD1O14562 309 aaKnown RBP16.85■□□□□ 0.29
HMGCS1-206ENST00000511774 KCNAB3O43448 404 aa16.85■□□□□ 0.29
HMGCS1-206ENST00000511774 UTS2O95399 124 aa16.85■□□□□ 0.29
HMGCS1-206ENST00000511774 SYNGR4O95473 234 aa16.85■□□□□ 0.29
HMGCS1-206ENST00000511774 ESRRBO95718 433 aa16.85■□□□□ 0.29
HMGCS1-206ENST00000511774 IL33O95760 270 aa16.85■□□□□ 0.29
HMGCS1-206ENST00000511774 COL6A2P12110 1019 aa16.85■□□□□ 0.29
HMGCS1-206ENST00000511774 TSPAN8P19075 237 aa16.85■□□□□ 0.29
HMGCS1-206ENST00000511774 EDNRAP25101 427 aa16.85■□□□□ 0.29
HMGCS1-206ENST00000511774 TRA2BP62995 288 aaKnown RBP16.85■□□□□ 0.29
HMGCS1-206ENST00000511774 CSTF3Q12996 717 aaKnown RBP16.85■□□□□ 0.29
HMGCS1-206ENST00000511774 FAM83EQ2M2I3 478 aa16.85■□□□□ 0.29
HMGCS1-206ENST00000511774 GRAMD1BQ3KR37 738 aa16.85■□□□□ 0.29
HMGCS1-206ENST00000511774 GGTA1PQ4G0N0 100 aa16.85■□□□□ 0.29
HMGCS1-206ENST00000511774 CYP27C1Q4G0S4 372 aa16.85■□□□□ 0.29
HMGCS1-206ENST00000511774 FAM120AOSQ5T036 256 aa16.85■□□□□ 0.29
HMGCS1-206ENST00000511774 METTL2BQ6P1Q9 378 aaKnown RBP16.85■□□□□ 0.29
HMGCS1-206ENST00000511774 WDR75Q8IWA0 830 aaKnown RBP16.85■□□□□ 0.29
HMGCS1-206ENST00000511774 TUSC5Q8IXB3 177 aa16.85■□□□□ 0.29
HMGCS1-206ENST00000511774 GTPBP8Q8N3Z3 284 aaPredicted RBP16.85■□□□□ 0.29
HMGCS1-206ENST00000511774 BANPQ8N9N5 519 aa16.85■□□□□ 0.29
HMGCS1-206ENST00000511774 RNF128Q8TEB7 428 aa16.85■□□□□ 0.29
HMGCS1-206ENST00000511774 KISS1RQ969F8 398 aaPredicted RBP16.85■□□□□ 0.29
HMGCS1-206ENST00000511774 C1orf159Q96HA4 380 aa16.85■□□□□ 0.29
HMGCS1-206ENST00000511774 RNF145Q96MT1 663 aa16.85■□□□□ 0.29
HMGCS1-206ENST00000511774 SRXN1Q9BYN0 137 aa16.85■□□□□ 0.29
HMGCS1-206ENST00000511774 ELOVL6Q9H5J4 265 aa16.85■□□□□ 0.29
HMGCS1-206ENST00000511774 TAS2R9Q9NYW1 312 aa16.85■□□□□ 0.29
HMGCS1-206ENST00000511774 GXYLT2A0PJZ3 443 aa16.84■□□□□ 0.29
HMGCS1-206ENST00000511774 E7EQL1 145 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms