RNA–Protein interactions for RNA: ENST00000511628.1

CHD1-207, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-207ENST00000511628 ARHGDIBP52566 201 aa2.41□□□□□ -2.02
CHD1-207ENST00000511628 LIM2P55344 173 aa2.41□□□□□ -2.02
CHD1-207ENST00000511628 NUCB2P80303 420 aa2.41□□□□□ -2.02
CHD1-207ENST00000511628 IL18R1Q13478 541 aa2.41□□□□□ -2.02
CHD1-207ENST00000511628 RUNX3Q13761 415 aa2.41□□□□□ -2.02
CHD1-207ENST00000511628 DPYSL3Q14195 570 aa2.41□□□□□ -2.02
CHD1-207ENST00000511628 SLC10A1Q14973 349 aa2.41□□□□□ -2.02
CHD1-207ENST00000511628 PPP1R3AQ16821 1122 aa2.41□□□□□ -2.02
CHD1-207ENST00000511628 CNPY1Q3B7I2 92 aa2.41□□□□□ -2.02
CHD1-207ENST00000511628 ZNF311Q5JNZ3 666 aa2.41□□□□□ -2.02
CHD1-207ENST00000511628 FAM120AOSQ5T036 256 aa2.41□□□□□ -2.02
CHD1-207ENST00000511628 FHL5Q5TD97 284 aa2.41□□□□□ -2.02
CHD1-207ENST00000511628 ZNF57Q68EA5 555 aaPredicted RBP2.41□□□□□ -2.02
CHD1-207ENST00000511628 LRRC8BQ6P9F7 803 aa2.41□□□□□ -2.02
CHD1-207ENST00000511628 STAC2Q6ZMT1 411 aa2.41□□□□□ -2.02
CHD1-207ENST00000511628 HSD11B1LQ7Z5J1 315 aa2.41□□□□□ -2.02
CHD1-207ENST00000511628 LINC01561Q8N1V8 128 aa2.41□□□□□ -2.02
CHD1-207ENST00000511628 ARL14Q8N4G2 192 aa2.41□□□□□ -2.02
CHD1-207ENST00000511628 CD177Q8N6Q3 437 aa2.41□□□□□ -2.02
CHD1-207ENST00000511628 OR10T2Q8NGX3 314 aa2.41□□□□□ -2.02
CHD1-207ENST00000511628 ADAMTS16Q8TE57 1224 aa2.41□□□□□ -2.02
CHD1-207ENST00000511628 TADA1Q96BN2 335 aa2.41□□□□□ -2.02
CHD1-207ENST00000511628 ERP44Q9BS26 406 aa2.41□□□□□ -2.02
CHD1-207ENST00000511628 COMMD4Q9H0A8 199 aa2.41□□□□□ -2.02
CHD1-207ENST00000511628 ZNF581Q9P0T4 197 aa2.41□□□□□ -2.02
CHD1-207ENST00000511628 SLC2A6Q9UGQ3 507 aa2.41□□□□□ -2.02
CHD1-207ENST00000511628 TMCC3Q9ULS5 477 aa2.41□□□□□ -2.02
CHD1-207ENST00000511628 BARX2Q9UMQ3 279 aaPredicted RBP2.41□□□□□ -2.02
CHD1-207ENST00000511628 CHMP2BQ9UQN3 213 aa2.41□□□□□ -2.02
CHD1-207ENST00000511628 NTNG1Q9Y2I2 539 aa2.41□□□□□ -2.02
CHD1-207ENST00000511628 SF3B1O75533 1304 aaKnown RBP eCLIP2.41□□□□□ -2.023e-9■■■■■ 206.8
CHD1-207ENST00000511628 A0A087WWV3 80 aa2.4□□□□□ -2.03
CHD1-207ENST00000511628 TRBV7-9A0A0J9YWB2 115 aa2.4□□□□□ -2.03
CHD1-207ENST00000511628 CTAGE5O15320 804 aa2.4□□□□□ -2.03
CHD1-207ENST00000511628 STX7O15400 261 aaKnown RBP2.4□□□□□ -2.03
CHD1-207ENST00000511628 TSC22D2O75157 780 aa2.4□□□□□ -2.03
CHD1-207ENST00000511628 B3GAT3O94766 335 aa2.4□□□□□ -2.03
CHD1-207ENST00000511628 SLC2A10O95528 541 aa2.4□□□□□ -2.03
CHD1-207ENST00000511628 IGF1P05019 195 aa2.4□□□□□ -2.03
CHD1-207ENST00000511628 IQCF3P0C7M6 154 aa2.4□□□□□ -2.03
CHD1-207ENST00000511628 CPN1P15169 458 aa2.4□□□□□ -2.03
CHD1-207ENST00000511628 SDC1P18827 310 aa2.4□□□□□ -2.03
CHD1-207ENST00000511628 HNRNPA2B1P22626 353 aaKnown RBP2.4□□□□□ -2.03
CHD1-207ENST00000511628 IL2RGP31785 369 aa2.4□□□□□ -2.03
CHD1-207ENST00000511628 KIF5BP33176 963 aa2.4□□□□□ -2.03
CHD1-207ENST00000511628 ACVR1BP36896 505 aa2.4□□□□□ -2.03
CHD1-207ENST00000511628 MAGEA5P43359 124 aa2.4□□□□□ -2.03
CHD1-207ENST00000511628 BDKRB1P46663 353 aa2.4□□□□□ -2.03
CHD1-207ENST00000511628 ALDH3B2P48448 385 aa2.4□□□□□ -2.03
CHD1-207ENST00000511628 NOVA1P51513 510 aaKnown RBP2.4□□□□□ -2.03
CHD1-207ENST00000511628 NAPAP54920 295 aa2.4□□□□□ -2.03
CHD1-207ENST00000511628 PAX2Q02962 417 aa2.4□□□□□ -2.03
CHD1-207ENST00000511628 PJVKQ0ZLH3 352 aa2.4□□□□□ -2.03
CHD1-207ENST00000511628 TAF7Q15545 349 aaPredicted RBP2.4□□□□□ -2.03
CHD1-207ENST00000511628 MAPK6Q16659 721 aa2.4□□□□□ -2.03
CHD1-207ENST00000511628 RNF212Q495C1 297 aa2.4□□□□□ -2.03
CHD1-207ENST00000511628 NADK2Q4G0N4 442 aa2.4□□□□□ -2.03
CHD1-207ENST00000511628 CYBRD1Q53TN4 286 aa2.4□□□□□ -2.03
CHD1-207ENST00000511628 CELF3Q5SZQ8 465 aaKnown RBP2.4□□□□□ -2.03
CHD1-207ENST00000511628 LCE3EQ5T5B0 92 aa2.4□□□□□ -2.03
CHD1-207ENST00000511628 RSBN1Q5VWQ0 802 aaPredicted RBP2.4□□□□□ -2.03
CHD1-207ENST00000511628 PYHIN1Q6K0P9 492 aa2.4□□□□□ -2.03
CHD1-207ENST00000511628 BAIAP2L2Q6UXY1 529 aa2.4□□□□□ -2.03
CHD1-207ENST00000511628 ZNF600Q6ZNG1 722 aa2.4□□□□□ -2.03
CHD1-207ENST00000511628 CENPUQ71F23 418 aa2.4□□□□□ -2.03
CHD1-207ENST00000511628 DPY19L4Q7Z388 723 aa2.4□□□□□ -2.03
CHD1-207ENST00000511628 ZDHHC21Q8IVQ6 265 aa2.4□□□□□ -2.03
CHD1-207ENST00000511628 GMCL1P1Q8NEA9 526 aa2.4□□□□□ -2.03
CHD1-207ENST00000511628 BEST4Q8NFU0 473 aa2.4□□□□□ -2.03
CHD1-207ENST00000511628 CNIH3Q8TBE1 160 aa2.4□□□□□ -2.03
CHD1-207ENST00000511628 AGAP11Q8TF27 550 aa2.4□□□□□ -2.03
CHD1-207ENST00000511628 ARNTL2Q8WYA1 636 aa2.4□□□□□ -2.03
CHD1-207ENST00000511628 RPL3LQ92901 407 aaKnown RBP2.4□□□□□ -2.03
CHD1-207ENST00000511628 PINX1Q96BK5 328 aaKnown RBP2.4□□□□□ -2.03
CHD1-207ENST00000511628 ELMO2Q96JJ3 720 aa2.4□□□□□ -2.03
CHD1-207ENST00000511628 C1orf147Q96MC9 270 aaPredicted RBP2.4□□□□□ -2.03
CHD1-207ENST00000511628 GPA33Q99795 319 aa2.4□□□□□ -2.03
CHD1-207ENST00000511628 TPPP3Q9BW30 176 aa2.4□□□□□ -2.03
CHD1-207ENST00000511628 HCAR1Q9BXC0 346 aa2.4□□□□□ -2.03
CHD1-207ENST00000511628 KRTAP4-4Q9BYR3 166 aa2.4□□□□□ -2.03
CHD1-207ENST00000511628 TMEM117Q9H0C3 514 aa2.4□□□□□ -2.03
CHD1-207ENST00000511628 POLR3FQ9H1D9 316 aaPredicted RBP2.4□□□□□ -2.03
CHD1-207ENST00000511628 TIGARQ9NQ88 270 aa2.4□□□□□ -2.03
CHD1-207ENST00000511628 B4GALT7Q9UBV7 327 aa2.4□□□□□ -2.03
CHD1-207ENST00000511628 ANAPC7Q9UJX3 599 aa2.4□□□□□ -2.03
CHD1-207ENST00000511628 USP16Q9Y5T5 823 aa2.4□□□□□ -2.03
CHD1-207ENST00000511628 CFAP65Q6ZU64 1925 aaKnown RBP2.39□□□□□ -2.03
CHD1-207ENST00000511628 SAGE2PA6NJ88 616 aa2.39□□□□□ -2.03
CHD1-207ENST00000511628 G3V3Y1 287 aa2.39□□□□□ -2.03
CHD1-207ENST00000511628 ANGPT2O15123 496 aa2.39□□□□□ -2.03
CHD1-207ENST00000511628 ZSCAN12O43309 604 aa2.39□□□□□ -2.03
CHD1-207ENST00000511628 LATO43561 262 aa2.39□□□□□ -2.03
CHD1-207ENST00000511628 OR1F1O43749 312 aa2.39□□□□□ -2.03
CHD1-207ENST00000511628 STX11O75558 287 aa2.39□□□□□ -2.03
CHD1-207ENST00000511628 RHBDL1O75783 438 aa2.39□□□□□ -2.03
CHD1-207ENST00000511628 OPN1LWP04000 364 aa2.39□□□□□ -2.03
CHD1-207ENST00000511628 CSF2P04141 144 aa2.39□□□□□ -2.03
CHD1-207ENST00000511628 KRT8P05787 483 aa2.39□□□□□ -2.03
CHD1-207ENST00000511628 SNRPCP09234 159 aaKnown RBP2.39□□□□□ -2.03
CHD1-207ENST00000511628 DUX4L4P0CJ87 422 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms