RNA–Protein interactions for RNA: ENST00000511426.5

SCLT1-209, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-209ENST00000511426 CCNYL3P0C7X3 344 aa14.07□□□□□ -0.16
SCLT1-209ENST00000511426 ELAVL4P26378 380 aaKnown RBP14.07□□□□□ -0.16
SCLT1-209ENST00000511426 IFNGR2P38484 337 aa14.07□□□□□ -0.16
SCLT1-209ENST00000511426 DAPP51397 102 aa14.07□□□□□ -0.16
SCLT1-209ENST00000511426 GPR143P51810 404 aa14.07□□□□□ -0.16
SCLT1-209ENST00000511426 FGFBP1Q14512 234 aa14.07□□□□□ -0.16
SCLT1-209ENST00000511426 EXOC3L2Q2M3D2 409 aa14.07□□□□□ -0.16
SCLT1-209ENST00000511426 MRPL2Q5T653 305 aaKnown RBP14.07□□□□□ -0.16
SCLT1-209ENST00000511426 ZNF440Q8IYI8 595 aa14.07□□□□□ -0.16
SCLT1-209ENST00000511426 BCORP1Q8N888 145 aa14.07□□□□□ -0.16
SCLT1-209ENST00000511426 SETD9Q8NE22 299 aa14.07□□□□□ -0.16
SCLT1-209ENST00000511426 PRSS33Q8NF86 280 aa14.07□□□□□ -0.16
SCLT1-209ENST00000511426 NUBPLQ8TB37 319 aa14.07□□□□□ -0.16
SCLT1-209ENST00000511426 SLC38A4Q969I6 547 aa14.07□□□□□ -0.16
SCLT1-209ENST00000511426 VMP1Q96GC9 406 aa14.07□□□□□ -0.16
SCLT1-209ENST00000511426 FUZQ9BT04 418 aa14.07□□□□□ -0.16
SCLT1-209ENST00000511426 FAM118AQ9NWS6 357 aa14.07□□□□□ -0.16
SCLT1-209ENST00000511426 SCOCQ9UIL1 159 aa14.07□□□□□ -0.16
SCLT1-209ENST00000511426 SLC35A3Q9Y2D2 325 aa14.07□□□□□ -0.16
SCLT1-209ENST00000511426 TTC28Q96AY4 2481 aa14.07□□□□□ -0.16
SCLT1-209ENST00000511426 LOC102723996A0A087X1L8 192 aa14.06□□□□□ -0.16
SCLT1-209ENST00000511426 SEMA7AO75326 666 aa14.06□□□□□ -0.16
SCLT1-209ENST00000511426 LYNP07948 512 aa14.06□□□□□ -0.16
SCLT1-209ENST00000511426 NGFRP08138 427 aa14.06□□□□□ -0.16
SCLT1-209ENST00000511426 JMJD7P0C870 316 aa14.06□□□□□ -0.16
SCLT1-209ENST00000511426 PRKACGP22612 351 aa14.06□□□□□ -0.16
SCLT1-209ENST00000511426 YAP1P46937 504 aaKnown RBP14.06□□□□□ -0.16
SCLT1-209ENST00000511426 TAS2R41P59536 307 aa14.06□□□□□ -0.16
SCLT1-209ENST00000511426 PPP1R8Q12972 351 aaKnown RBP14.06□□□□□ -0.16
SCLT1-209ENST00000511426 KCNAB2Q13303 367 aa14.06□□□□□ -0.16
SCLT1-209ENST00000511426 GANABQ14697 944 aaKnown RBP14.06□□□□□ -0.16
SCLT1-209ENST00000511426 TRAM2Q15035 370 aa14.06□□□□□ -0.16
SCLT1-209ENST00000511426 NCF4Q15080 339 aa14.06□□□□□ -0.16
SCLT1-209ENST00000511426 TMEM164Q5U3C3 297 aa14.06□□□□□ -0.16
SCLT1-209ENST00000511426 OLIG3Q7RTU3 272 aa14.06□□□□□ -0.16
SCLT1-209ENST00000511426 ZNF550Q7Z398 422 aa14.06□□□□□ -0.16
SCLT1-209ENST00000511426 CPEB2Q7Z5Q1 589 aaKnown RBP14.06□□□□□ -0.16
SCLT1-209ENST00000511426 COMTD1Q86VU5 262 aa14.06□□□□□ -0.16
SCLT1-209ENST00000511426 LACC1Q8IV20 430 aa14.06□□□□□ -0.16
SCLT1-209ENST00000511426 PRSS58Q8IYP2 241 aa14.06□□□□□ -0.16
SCLT1-209ENST00000511426 ZSCAN1Q8NBB4 408 aa14.06□□□□□ -0.16
SCLT1-209ENST00000511426 DIO2Q92813 273 aa14.06□□□□□ -0.16
SCLT1-209ENST00000511426 NACC2Q96BF6 587 aa14.06□□□□□ -0.16
SCLT1-209ENST00000511426 NUDT9Q9BW91 350 aa14.06□□□□□ -0.16
SCLT1-209ENST00000511426 WWTR1Q9GZV5 400 aa14.06□□□□□ -0.16
SCLT1-209ENST00000511426 ZNF696Q9H7X3 374 aa14.06□□□□□ -0.16
SCLT1-209ENST00000511426 PAPOLBQ9NRJ5 636 aaKnown RBP14.06□□□□□ -0.16
SCLT1-209ENST00000511426 UBQLN4Q9NRR5 601 aa14.06□□□□□ -0.16
SCLT1-209ENST00000511426 SPTBP11277 2137 aa14.05□□□□□ -0.16
SCLT1-209ENST00000511426 LOC100130705A0A1B0GUX0 176 aa14.05□□□□□ -0.16
SCLT1-209ENST00000511426 A0A1W2PQ72 361 aa14.05□□□□□ -0.16
SCLT1-209ENST00000511426 MT-CO3P00414 261 aa14.05□□□□□ -0.16
SCLT1-209ENST00000511426 CBLP22681 906 aa14.05□□□□□ -0.16
SCLT1-209ENST00000511426 KRT20P35900 424 aa14.05□□□□□ -0.16
SCLT1-209ENST00000511426 COX10Q12887 443 aa14.05□□□□□ -0.16
SCLT1-209ENST00000511426 NPTX1Q15818 432 aa14.05□□□□□ -0.16
SCLT1-209ENST00000511426 MAPK14Q16539 360 aa14.05□□□□□ -0.16
SCLT1-209ENST00000511426 FGD3Q5JSP0 725 aa14.05□□□□□ -0.16
SCLT1-209ENST00000511426 ZNF770Q6IQ21 691 aaPredicted RBP14.05□□□□□ -0.16
SCLT1-209ENST00000511426 FAM198BQ6UWH4 519 aa14.05□□□□□ -0.16
SCLT1-209ENST00000511426 C8orf59Q8N0T1 100 aaPredicted RBP14.05□□□□□ -0.16
SCLT1-209ENST00000511426 CLIP4Q8N3C7 705 aa14.05□□□□□ -0.16
SCLT1-209ENST00000511426 ZNF441Q8N8Z8 693 aa14.05□□□□□ -0.16
SCLT1-209ENST00000511426 NFAM1Q8NET5 270 aaPredicted RBP14.05□□□□□ -0.16
SCLT1-209ENST00000511426 OR5L2Q8NGL0 311 aa14.05□□□□□ -0.16
SCLT1-209ENST00000511426 MR1Q95460 341 aa14.05□□□□□ -0.16
SCLT1-209ENST00000511426 MBOAT4Q96T53 435 aa14.05□□□□□ -0.16
SCLT1-209ENST00000511426 FEVQ99581 238 aa14.05□□□□□ -0.16
SCLT1-209ENST00000511426 MCHR1Q99705 422 aa14.05□□□□□ -0.16
SCLT1-209ENST00000511426 LRFN3Q9BTN0 628 aa14.05□□□□□ -0.16
SCLT1-209ENST00000511426 DGCR6LQ9BY27 220 aa14.05□□□□□ -0.16
SCLT1-209ENST00000511426 GRIP2Q9C0E4 1043 aa14.05□□□□□ -0.16
SCLT1-209ENST00000511426 NXF5Q9H1B4 397 aaKnown RBP14.05□□□□□ -0.16
SCLT1-209ENST00000511426 SOX17Q9H6I2 414 aaPredicted RBP14.05□□□□□ -0.16
SCLT1-209ENST00000511426 PARD6AQ9NPB6 346 aa14.05□□□□□ -0.16
SCLT1-209ENST00000511426 KRCC1Q9NPI7 259 aaPredicted RBP14.05□□□□□ -0.16
SCLT1-209ENST00000511426 KCNE5Q9UJ90 142 aa14.05□□□□□ -0.16
SCLT1-209ENST00000511426 SH3PXD2BA1X283 911 aa14.04□□□□□ -0.16
SCLT1-209ENST00000511426 A8MUA0 341 aa14.04□□□□□ -0.16
SCLT1-209ENST00000511426 PEX12O00623 359 aa14.04□□□□□ -0.16
SCLT1-209ENST00000511426 ABCB7O75027 752 aa14.04□□□□□ -0.16
SCLT1-209ENST00000511426 CSO75390 466 aaKnown RBP14.04□□□□□ -0.16
SCLT1-209ENST00000511426 DKK1O94907 266 aa14.04□□□□□ -0.16
SCLT1-209ENST00000511426 IGKV1D-16P01601 117 aa14.04□□□□□ -0.16
SCLT1-209ENST00000511426 RAB40ALP0C0E4 278 aa14.04□□□□□ -0.16
SCLT1-209ENST00000511426 ZNF28P17035 718 aa14.04□□□□□ -0.16
SCLT1-209ENST00000511426 TGM1P22735 817 aa14.04□□□□□ -0.16
SCLT1-209ENST00000511426 RYKP34925 604 aa14.04□□□□□ -0.16
SCLT1-209ENST00000511426 LIMK1P53667 647 aa14.04□□□□□ -0.16
SCLT1-209ENST00000511426 ESRRGP62508 458 aa14.04□□□□□ -0.16
SCLT1-209ENST00000511426 PIN1Q13526 163 aaPredicted RBP14.04□□□□□ -0.16
SCLT1-209ENST00000511426 ZNF613Q6PF04 617 aa14.04□□□□□ -0.16
SCLT1-209ENST00000511426 PAPD4Q6PIY7 484 aaKnown RBP14.04□□□□□ -0.16
SCLT1-209ENST00000511426 CD300LDQ6UXZ3 194 aa14.04□□□□□ -0.16
SCLT1-209ENST00000511426 HSDL2Q6YN16 418 aa14.04□□□□□ -0.16
SCLT1-209ENST00000511426 LANCL3Q6ZV70 420 aa14.04□□□□□ -0.16
SCLT1-209ENST00000511426 PLEKHM3Q6ZWE6 761 aa14.04□□□□□ -0.16
SCLT1-209ENST00000511426 RBM45Q8IUH3 476 aaKnown RBP14.04□□□□□ -0.16
SCLT1-209ENST00000511426 C9orf40Q8IXQ3 194 aa14.04□□□□□ -0.16
SCLT1-209ENST00000511426 SLC34A3Q8N130 599 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms