RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 SLFN11Q7Z7L1 901 aa5.49□□□□□ -1.53
USP53-206ENST00000510737 ARHGAP12Q8IWW6 846 aa5.49□□□□□ -1.53
USP53-206ENST00000510737 EID3Q8N140 333 aa5.49□□□□□ -1.53
USP53-206ENST00000510737 LRRC75A-AS1Q8N1F1 130 aa5.49□□□□□ -1.53
USP53-206ENST00000510737 NTAN1Q96AB6 310 aa5.49□□□□□ -1.53
USP53-206ENST00000510737 APOPT1Q96IL0 206 aa5.49□□□□□ -1.53
USP53-206ENST00000510737 SECISBP2Q96T21 854 aaKnown RBP5.49□□□□□ -1.53
USP53-206ENST00000510737 PITPNM3Q9BZ71 974 aa5.49□□□□□ -1.53
USP53-206ENST00000510737 SLC26A1Q9H2B4 701 aa5.49□□□□□ -1.53
USP53-206ENST00000510737 WDR54Q9H977 334 aa5.49□□□□□ -1.53
USP53-206ENST00000510737 MRM3Q9HC36 420 aaKnown RBP5.49□□□□□ -1.53
USP53-206ENST00000510737 ASIC3Q9UHC3 531 aa5.49□□□□□ -1.53
USP53-206ENST00000510737 SLC24A2Q9UI40 661 aa5.49□□□□□ -1.53
USP53-206ENST00000510737 NOTCH1P46531 2555 aa5.49□□□□□ -1.53
USP53-206ENST00000510737 FAM237AA0A1B0GTK4 181 aa5.48□□□□□ -1.53
USP53-206ENST00000510737 A0A1W2PPR1 153 aa5.48□□□□□ -1.53
USP53-206ENST00000510737 GSAPA4D1B5 854 aa5.48□□□□□ -1.53
USP53-206ENST00000510737 ARHGAP42A6NI28 874 aa5.48□□□□□ -1.53
USP53-206ENST00000510737 EIF3FO00303 357 aaPredicted RBP5.48□□□□□ -1.53
USP53-206ENST00000510737 P4HA2O15460 535 aa5.48□□□□□ -1.53
USP53-206ENST00000510737 POP7O75817 140 aaKnown RBP5.48□□□□□ -1.53
USP53-206ENST00000510737 CDK14O94921 469 aa5.48□□□□□ -1.53
USP53-206ENST00000510737 COX6A1P12074 109 aa5.48□□□□□ -1.53
USP53-206ENST00000510737 SYT1P21579 422 aa5.48□□□□□ -1.53
USP53-206ENST00000510737 FKBP3Q00688 224 aaKnown RBP5.48□□□□□ -1.53
USP53-206ENST00000510737 SLC5A12Q1EHB4 618 aa5.48□□□□□ -1.53
USP53-206ENST00000510737 PDLIM3Q53GG5 364 aaPredicted RBP5.48□□□□□ -1.53
USP53-206ENST00000510737 TFDP3Q5H9I0 405 aa5.48□□□□□ -1.53
USP53-206ENST00000510737 BHLHB9Q6PI77 547 aa5.48□□□□□ -1.53
USP53-206ENST00000510737 SH2D5Q6ZV89 423 aa5.48□□□□□ -1.53
USP53-206ENST00000510737 NDUFAF7Q7L592 441 aa5.48□□□□□ -1.53
USP53-206ENST00000510737 STRADAQ7RTN6 431 aa5.48□□□□□ -1.53
USP53-206ENST00000510737 MDS2Q8NDY4 140 aa5.48□□□□□ -1.53
USP53-206ENST00000510737 JOSD2Q8TAC2 188 aa5.48□□□□□ -1.53
USP53-206ENST00000510737 RRNAD1Q96FB5 475 aaKnown RBP5.48□□□□□ -1.53
USP53-206ENST00000510737 SMC6Q96SB8 1091 aa5.48□□□□□ -1.53
USP53-206ENST00000510737 IMP3Q9NV31 184 aaKnown RBP5.48□□□□□ -1.53
USP53-206ENST00000510737 PPP1R14DQ9NXH3 145 aa5.48□□□□□ -1.53
USP53-206ENST00000510737 TAS2R14Q9NYV8 317 aa5.48□□□□□ -1.53
USP53-206ENST00000510737 CTSFQ9UBX1 484 aa5.48□□□□□ -1.53
USP53-206ENST00000510737 SONP18583 2426 aaKnown RBP5.48□□□□□ -1.53
USP53-206ENST00000510737 NUP210LQ5VU65 1888 aa5.47□□□□□ -1.53
USP53-206ENST00000510737 NSG1A0A0A6YYJ2 146 aa5.47□□□□□ -1.53
USP53-206ENST00000510737 MEIOCA2RUB1 952 aa5.47□□□□□ -1.53
USP53-206ENST00000510737 MAGEB17A8MXT2 336 aa5.47□□□□□ -1.53
USP53-206ENST00000510737 DFFAO00273 331 aa5.47□□□□□ -1.53
USP53-206ENST00000510737 TFAP2AP05549 437 aa5.47□□□□□ -1.53
USP53-206ENST00000510737 EEF1DP29692 281 aaKnown RBP5.47□□□□□ -1.53
USP53-206ENST00000510737 CDH5P33151 784 aaPredicted RBP5.47□□□□□ -1.53
USP53-206ENST00000510737 PRCPP42785 496 aa5.47□□□□□ -1.53
USP53-206ENST00000510737 NSG1P42857 185 aa5.47□□□□□ -1.53
USP53-206ENST00000510737 OR1D4P47884 311 aa5.47□□□□□ -1.53
USP53-206ENST00000510737 RPP30P78346 268 aaKnown RBP5.47□□□□□ -1.53
USP53-206ENST00000510737 CETN1Q12798 172 aa5.47□□□□□ -1.53
USP53-206ENST00000510737 TMEM115Q12893 351 aaPredicted RBP5.47□□□□□ -1.53
USP53-206ENST00000510737 PRKAA1Q13131 559 aa5.47□□□□□ -1.53
USP53-206ENST00000510737 CAPRIN1Q14444 709 aaKnown RBP5.47□□□□□ -1.53
USP53-206ENST00000510737 NFE2L1Q14494 772 aa5.47□□□□□ -1.53
USP53-206ENST00000510737 CDONQ4KMG0 1287 aa5.47□□□□□ -1.53
USP53-206ENST00000510737 FILIP1LQ4L180 1135 aa5.47□□□□□ -1.53
USP53-206ENST00000510737 NDUFAF2Q8N183 169 aa5.47□□□□□ -1.53
USP53-206ENST00000510737 TMEM35BQ8NCS4 154 aa5.47□□□□□ -1.53
USP53-206ENST00000510737 GPR26Q8NDV2 337 aa5.47□□□□□ -1.53
USP53-206ENST00000510737 FAM172AQ8WUF8 416 aa5.47□□□□□ -1.53
USP53-206ENST00000510737 GLYATL1Q969I3 302 aa5.47□□□□□ -1.53
USP53-206ENST00000510737 RBM4BQ9BQ04 359 aaKnown RBP5.47□□□□□ -1.53
USP53-206ENST00000510737 MGME1Q9BQP7 344 aa5.47□□□□□ -1.53
USP53-206ENST00000510737 KIR3DX1Q9H7L2 352 aa5.47□□□□□ -1.53
USP53-206ENST00000510737 SLC7A10Q9NS82 523 aa5.47□□□□□ -1.53
USP53-206ENST00000510737 MTMR6Q9Y217 621 aa5.47□□□□□ -1.53
USP53-206ENST00000510737 CAPN7Q9Y6W3 813 aa5.47□□□□□ -1.53
USP53-206ENST00000510737 IGHV1-45A0A0A0MS14 117 aa5.46□□□□□ -1.54
USP53-206ENST00000510737 RGSL1A5PLK6 1076 aa5.46□□□□□ -1.54
USP53-206ENST00000510737 A8MUI8 341 aa5.46□□□□□ -1.54
USP53-206ENST00000510737 PLOD2O00469 737 aa5.46□□□□□ -1.54
USP53-206ENST00000510737 MAP2K7O14733 419 aa5.46□□□□□ -1.54
USP53-206ENST00000510737 SMPD2O60906 423 aa5.46□□□□□ -1.54
USP53-206ENST00000510737 YEATS4O95619 227 aa5.46□□□□□ -1.54
USP53-206ENST00000510737 PNMA6AP0CW24 399 aaPredicted RBP5.46□□□□□ -1.54
USP53-206ENST00000510737 CYP11B1P15538 503 aa5.46□□□□□ -1.54
USP53-206ENST00000510737 VCLP18206 1134 aa5.46□□□□□ -1.54
USP53-206ENST00000510737 HLA-DPA1P20036 260 aa5.46□□□□□ -1.54
USP53-206ENST00000510737 SDC4P31431 198 aa5.46□□□□□ -1.54
USP53-206ENST00000510737 CPOXP36551 454 aa5.46□□□□□ -1.54
USP53-206ENST00000510737 ZFP36L2P47974 494 aaKnown RBP5.46□□□□□ -1.54
USP53-206ENST00000510737 KRTAP12-2P59991 146 aa5.46□□□□□ -1.54
USP53-206ENST00000510737 ZNF33BQ06732 778 aa5.46□□□□□ -1.54
USP53-206ENST00000510737 KLC1Q07866 573 aa5.46□□□□□ -1.54
USP53-206ENST00000510737 XRCC4Q13426 336 aa5.46□□□□□ -1.54
USP53-206ENST00000510737 ALS2CLQ60I27 953 aa5.46□□□□□ -1.54
USP53-206ENST00000510737 SCYL2Q6P3W7 929 aa5.46□□□□□ -1.54
USP53-206ENST00000510737 ENOSF1Q7L5Y1 443 aa5.46□□□□□ -1.54
USP53-206ENST00000510737 GALNTL5Q7Z4T8 443 aa5.46□□□□□ -1.54
USP53-206ENST00000510737 AMZ2Q86W34 360 aa5.46□□□□□ -1.54
USP53-206ENST00000510737 DNAJC22Q8N4W6 341 aa5.46□□□□□ -1.54
USP53-206ENST00000510737 GBGT1Q8N5D6 347 aa5.46□□□□□ -1.54
USP53-206ENST00000510737 NPWQ8N729 165 aa5.46□□□□□ -1.54
USP53-206ENST00000510737 OR10Q1Q8NGQ4 319 aa5.46□□□□□ -1.54
USP53-206ENST00000510737 OR2T6Q8NHC8 308 aa5.46□□□□□ -1.54
USP53-206ENST00000510737 UTP15Q8TED0 518 aaKnown RBP5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms