RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 PRR5P85299 388 aa12.32□□□□□ -0.44
SNF8-206ENST00000509989 PMPCAQ10713 525 aa12.32□□□□□ -0.44
SNF8-206ENST00000509989 FUT5Q11128 374 aa12.32□□□□□ -0.44
SNF8-206ENST00000509989 SF3A3Q12874 501 aaKnown RBP eCLIP12.32□□□□□ -0.441e-7■□□□□ 10.6
SNF8-206ENST00000509989 CD226Q15762 336 aa12.32□□□□□ -0.44
SNF8-206ENST00000509989 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.32□□□□□ -0.44
SNF8-206ENST00000509989 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.32□□□□□ -0.44
SNF8-206ENST00000509989 VASNQ6EMK4 673 aa12.32□□□□□ -0.44
SNF8-206ENST00000509989 RPTNQ6XPR3 784 aa12.32□□□□□ -0.44
SNF8-206ENST00000509989 LIX1LQ8IVB5 337 aa12.32□□□□□ -0.44
SNF8-206ENST00000509989 LRRC34Q8IZ02 419 aa12.32□□□□□ -0.44
SNF8-206ENST00000509989 COX18Q8N8Q8 333 aa12.32□□□□□ -0.44
SNF8-206ENST00000509989 FADS6Q8N9I5 356 aa12.32□□□□□ -0.44
SNF8-206ENST00000509989 SFXN5Q8TD22 340 aa12.32□□□□□ -0.44
SNF8-206ENST00000509989 RAB8BQ92930 207 aa12.32□□□□□ -0.44
SNF8-206ENST00000509989 WDYHV1Q96HA8 205 aa12.32□□□□□ -0.44
SNF8-206ENST00000509989 ACTRT3Q9BYD9 372 aa12.32□□□□□ -0.44
SNF8-206ENST00000509989 UCK2Q9BZX2 261 aa12.32□□□□□ -0.44
SNF8-206ENST00000509989 OR2B2Q9GZK3 357 aa12.32□□□□□ -0.44
SNF8-206ENST00000509989 TP63Q9H3D4 680 aaPredicted RBP12.32□□□□□ -0.44
SNF8-206ENST00000509989 PIGUQ9H490 435 aa12.32□□□□□ -0.44
SNF8-206ENST00000509989 B4GALT7Q9UBV7 327 aa12.32□□□□□ -0.44
SNF8-206ENST00000509989 RNF6Q9Y252 685 aa12.32□□□□□ -0.44
SNF8-206ENST00000509989 PKDREJQ9NTG1 2253 aa12.32□□□□□ -0.44
SNF8-206ENST00000509989 PRSS51A0A1B0GVH4 220 aa12.31□□□□□ -0.44
SNF8-206ENST00000509989 SLCO1B7G3V0H7 640 aa12.31□□□□□ -0.44
SNF8-206ENST00000509989 H0YC42 278 aa12.31□□□□□ -0.44
SNF8-206ENST00000509989 CBR3O75828 277 aa12.31□□□□□ -0.44
SNF8-206ENST00000509989 KCNH1O95259 989 aa12.31□□□□□ -0.44
SNF8-206ENST00000509989 MATN1P21941 496 aa12.31□□□□□ -0.44
SNF8-206ENST00000509989 ELAVL4P26378 380 aaKnown RBP12.31□□□□□ -0.44
SNF8-206ENST00000509989 ACVR2AP27037 513 aa12.31□□□□□ -0.44
SNF8-206ENST00000509989 S100A3P33764 101 aa12.31□□□□□ -0.44
SNF8-206ENST00000509989 PRIM2P49643 509 aa12.31□□□□□ -0.44
SNF8-206ENST00000509989 AQP5P55064 265 aa12.31□□□□□ -0.44
SNF8-206ENST00000509989 TPD52P55327 224 aaPredicted RBP12.31□□□□□ -0.44
SNF8-206ENST00000509989 PER3P56645 1201 aa12.31□□□□□ -0.44
SNF8-206ENST00000509989 PDCD4Q53EL6 469 aaKnown RBP12.31□□□□□ -0.44
SNF8-206ENST00000509989 DCST2Q5T1A1 773 aa12.31□□□□□ -0.44
SNF8-206ENST00000509989 TNFAIP8L2Q6P589 184 aaPredicted RBP12.31□□□□□ -0.44
SNF8-206ENST00000509989 ARSKQ6UWY0 536 aa12.31□□□□□ -0.44
SNF8-206ENST00000509989 DNAJC14Q6Y2X3 702 aaPredicted RBP12.31□□□□□ -0.44
SNF8-206ENST00000509989 FUNDC1Q8IVP5 155 aa12.31□□□□□ -0.44
SNF8-206ENST00000509989 ULK2Q8IYT8 1036 aa12.31□□□□□ -0.44
SNF8-206ENST00000509989 GOLGA6L1Q8N7Z2 621 aa12.31□□□□□ -0.44
SNF8-206ENST00000509989 NAXEQ8NCW5 288 aa12.31□□□□□ -0.44
SNF8-206ENST00000509989 OR56A1Q8NGH5 318 aa12.31□□□□□ -0.44
SNF8-206ENST00000509989 OR14L1PQ8NHC6 308 aa12.31□□□□□ -0.44
SNF8-206ENST00000509989 DYDC1Q8WWB3 177 aa12.31□□□□□ -0.44
SNF8-206ENST00000509989 VPS33AQ96AX1 596 aa12.31□□□□□ -0.44
SNF8-206ENST00000509989 SARAFQ96BY9 339 aa12.31□□□□□ -0.44
SNF8-206ENST00000509989 SDCCAG3Q96C92 435 aa12.31□□□□□ -0.44
SNF8-206ENST00000509989 MAGEB18Q96M61 343 aa12.31□□□□□ -0.44
SNF8-206ENST00000509989 TTYH2Q9BSA4 534 aa12.31□□□□□ -0.44
SNF8-206ENST00000509989 G6PC3Q9BUM1 346 aa12.31□□□□□ -0.44
SNF8-206ENST00000509989 BTBD2Q9BX70 525 aa12.31□□□□□ -0.44
SNF8-206ENST00000509989 OR51I1Q9H343 314 aa12.31□□□□□ -0.44
SNF8-206ENST00000509989 RYDENQ9NUL5 291 aaKnown RBP12.31□□□□□ -0.44
SNF8-206ENST00000509989 FAM120CQ9NX05 1096 aaKnown RBP12.31□□□□□ -0.44
SNF8-206ENST00000509989 PPP4R1LQ9P1A2 415 aa12.31□□□□□ -0.44
SNF8-206ENST00000509989 SUCOQ9UBS9 1254 aaKnown RBP12.31□□□□□ -0.44
SNF8-206ENST00000509989 UNC79Q9P2D8 2635 aa12.3□□□□□ -0.44
SNF8-206ENST00000509989 A0A0G2JNJ9 132 aa12.3□□□□□ -0.44
SNF8-206ENST00000509989 NKX2-6A6NCS4 301 aa12.3□□□□□ -0.44
SNF8-206ENST00000509989 OR14I1A6ND48 311 aa12.3□□□□□ -0.44
SNF8-206ENST00000509989 BCKDKO14874 412 aa12.3□□□□□ -0.44
SNF8-206ENST00000509989 UBDO15205 165 aa12.3□□□□□ -0.44
SNF8-206ENST00000509989 FCMRO60667 390 aa12.3□□□□□ -0.44
SNF8-206ENST00000509989 BCAS1O75363 584 aaPredicted RBP12.3□□□□□ -0.44
SNF8-206ENST00000509989 PGRP06401 933 aa12.3□□□□□ -0.44
SNF8-206ENST00000509989 OR12D1P0DN82 309 aa12.3□□□□□ -0.44
SNF8-206ENST00000509989 TBXA2RP21731 343 aa12.3□□□□□ -0.44
SNF8-206ENST00000509989 DPP4P27487 766 aa12.3□□□□□ -0.44
SNF8-206ENST00000509989 DCTP40126 519 aa12.3□□□□□ -0.44
SNF8-206ENST00000509989 GFRA1P56159 465 aa12.3□□□□□ -0.44
SNF8-206ENST00000509989 CLDN15P56746 228 aa12.3□□□□□ -0.44
SNF8-206ENST00000509989 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.3□□□□□ -0.44
SNF8-206ENST00000509989 COX20Q5RI15 118 aa12.3□□□□□ -0.44
SNF8-206ENST00000509989 C1orf185Q5T7R7 199 aa12.3□□□□□ -0.44
SNF8-206ENST00000509989 WLSQ5T9L3 541 aa12.3□□□□□ -0.44
SNF8-206ENST00000509989 SAXO2Q658L1 398 aa12.3□□□□□ -0.44
SNF8-206ENST00000509989 CGB2Q6NT52 195 aa12.3□□□□□ -0.44
SNF8-206ENST00000509989 ZCCHC12Q6PEW1 402 aa12.3□□□□□ -0.44
SNF8-206ENST00000509989 KIRREL3Q8IZU9 778 aa12.3□□□□□ -0.44
SNF8-206ENST00000509989 ZNF808Q8N4W9 903 aaPredicted RBP12.3□□□□□ -0.44
SNF8-206ENST00000509989 GOT1L1Q8NHS2 421 aaPredicted RBP12.3□□□□□ -0.44
SNF8-206ENST00000509989 PNPT1Q8TCS8 783 aaKnown RBP12.3□□□□□ -0.44
SNF8-206ENST00000509989 ADAMTS15Q8TE58 950 aa12.3□□□□□ -0.44
SNF8-206ENST00000509989 PHF10Q8WUB8 498 aaKnown RBP12.3□□□□□ -0.44
SNF8-206ENST00000509989 ABTB1Q969K4 478 aaPredicted RBP12.3□□□□□ -0.44
SNF8-206ENST00000509989 SH3YL1Q96HL8 342 aaPredicted RBP12.3□□□□□ -0.44
SNF8-206ENST00000509989 SLC35G5Q96KT7 338 aa12.3□□□□□ -0.44
SNF8-206ENST00000509989 CCDC115Q96NT0 180 aa12.3□□□□□ -0.44
SNF8-206ENST00000509989 OR52E6Q96RD3 313 aa12.3□□□□□ -0.44
SNF8-206ENST00000509989 STACQ99469 402 aa12.3□□□□□ -0.44
SNF8-206ENST00000509989 SDF2Q99470 211 aa12.3□□□□□ -0.44
SNF8-206ENST00000509989 SDR39U1Q9NRG7 319 aaPredicted RBP12.3□□□□□ -0.44
SNF8-206ENST00000509989 DUSP22Q9NRW4 184 aa12.3□□□□□ -0.44
SNF8-206ENST00000509989 TAS2R10Q9NYW0 307 aa12.3□□□□□ -0.44
SNF8-206ENST00000509989 Q9UFV3 132 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms