RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 BBS4Q96RK4 519 aa14.25□□□□□ -0.13
RAB40C-202ENST00000509637 TMEM204Q9BSN7 226 aa14.25□□□□□ -0.13
RAB40C-202ENST00000509637 ZNF701Q9NV72 531 aaPredicted RBP14.25□□□□□ -0.13
RAB40C-202ENST00000509637 FAM120CQ9NX05 1096 aaKnown RBP14.25□□□□□ -0.13
RAB40C-202ENST00000509637 PROCRQ9UNN8 238 aa14.25□□□□□ -0.13
RAB40C-202ENST00000509637 POLR3HQ9Y535 204 aaPredicted RBP14.25□□□□□ -0.13
RAB40C-202ENST00000509637 PTGDR2Q9Y5Y4 395 aa14.25□□□□□ -0.13
RAB40C-202ENST00000509637 CADP27708 2225 aa14.25□□□□□ -0.13
RAB40C-202ENST00000509637 FBN3Q75N90 2809 aa14.24□□□□□ -0.13
RAB40C-202ENST00000509637 CR1P17927 2039 aa14.24□□□□□ -0.13
RAB40C-202ENST00000509637 A0A0J9YW62 118 aa14.24□□□□□ -0.13
RAB40C-202ENST00000509637 GOLGA8RI6L899 631 aa14.24□□□□□ -0.13
RAB40C-202ENST00000509637 ANGPTL1O95841 491 aa14.24□□□□□ -0.13
RAB40C-202ENST00000509637 PAX1P15863 534 aa14.24□□□□□ -0.13
RAB40C-202ENST00000509637 HMOX2P30519 316 aa14.24□□□□□ -0.13
RAB40C-202ENST00000509637 GABRA3P34903 492 aa14.24□□□□□ -0.13
RAB40C-202ENST00000509637 RFX3P48380 749 aa14.24□□□□□ -0.13
RAB40C-202ENST00000509637 KCNJ5P48544 419 aa14.24□□□□□ -0.13
RAB40C-202ENST00000509637 HEPACAMQ14CZ8 416 aa14.24□□□□□ -0.13
RAB40C-202ENST00000509637 KIAA0040Q15053 153 aa14.24□□□□□ -0.13
RAB40C-202ENST00000509637 SPIN4Q56A73 249 aa14.24□□□□□ -0.13
RAB40C-202ENST00000509637 ANKRD26P1Q6NSI1 321 aa14.24□□□□□ -0.13
RAB40C-202ENST00000509637 SH2D5Q6ZV89 423 aa14.24□□□□□ -0.13
RAB40C-202ENST00000509637 TAOK1Q7L7X3 1001 aa14.24□□□□□ -0.13
RAB40C-202ENST00000509637 RAB3IL1Q8TBN0 382 aa14.24□□□□□ -0.13
RAB40C-202ENST00000509637 MZB1Q8WU39 189 aa14.24□□□□□ -0.13
RAB40C-202ENST00000509637 SLC9A6Q92581 669 aa14.24□□□□□ -0.13
RAB40C-202ENST00000509637 NEUROG1Q92886 237 aa14.24□□□□□ -0.13
RAB40C-202ENST00000509637 L3HYPDHQ96EM0 354 aa14.24□□□□□ -0.13
RAB40C-202ENST00000509637 SLC39A3Q9BRY0 314 aa14.24□□□□□ -0.13
RAB40C-202ENST00000509637 STMN4Q9H169 189 aaPredicted RBP14.24□□□□□ -0.13
RAB40C-202ENST00000509637 ABCG2Q9UNQ0 655 aa14.24□□□□□ -0.13
RAB40C-202ENST00000509637 VDAC3Q9Y277 283 aa14.24□□□□□ -0.13
RAB40C-202ENST00000509637 ALPK2Q86TB3 2170 aa14.23□□□□□ -0.13
RAB40C-202ENST00000509637 GIMAP1-GIMAP5A0A087WTJ2 511 aa14.23□□□□□ -0.13
RAB40C-202ENST00000509637 G3V2L1 256 aa14.23□□□□□ -0.13
RAB40C-202ENST00000509637 CXCL13O43927 109 aa14.23□□□□□ -0.13
RAB40C-202ENST00000509637 ATP5F1P24539 256 aaPredicted RBP14.23□□□□□ -0.13
RAB40C-202ENST00000509637 PRR5P85299 388 aa14.23□□□□□ -0.13
RAB40C-202ENST00000509637 TNK1Q13470 666 aa14.23□□□□□ -0.13
RAB40C-202ENST00000509637 TSC22D1Q15714 1073 aa14.23□□□□□ -0.13
RAB40C-202ENST00000509637 GLYR1Q49A26 553 aaPredicted RBP14.23□□□□□ -0.13
RAB40C-202ENST00000509637 ZNF704Q6ZNC4 412 aaPredicted RBP14.23□□□□□ -0.13
RAB40C-202ENST00000509637 C20orf204Q6ZNR8 217 aa14.23□□□□□ -0.13
RAB40C-202ENST00000509637 PLEKHM3Q6ZWE6 761 aa14.23□□□□□ -0.13
RAB40C-202ENST00000509637 LSRQ86X29 649 aaPredicted RBP14.23□□□□□ -0.13
RAB40C-202ENST00000509637 SAMD14Q8IZD0 417 aaPredicted RBP14.23□□□□□ -0.13
RAB40C-202ENST00000509637 MMGT1Q8N4V1 131 aa14.23□□□□□ -0.13
RAB40C-202ENST00000509637 GATSQ8NAP1 163 aa14.23□□□□□ -0.13
RAB40C-202ENST00000509637 OR10D3Q8NH80 312 aa14.23□□□□□ -0.13
RAB40C-202ENST00000509637 CDC26Q8NHZ8 85 aa14.23□□□□□ -0.13
RAB40C-202ENST00000509637 IFT81Q8WYA0 676 aa14.23□□□□□ -0.13
RAB40C-202ENST00000509637 GIMAP5Q96F15 307 aa14.23□□□□□ -0.13
RAB40C-202ENST00000509637 C12orf65Q9H3J6 166 aaKnown RBP14.23□□□□□ -0.13
RAB40C-202ENST00000509637 MYNNQ9NPC7 610 aa14.23□□□□□ -0.13
RAB40C-202ENST00000509637 AP4B1Q9Y6B7 739 aa14.23□□□□□ -0.13
RAB40C-202ENST00000509637 ABCA1O95477 2261 aa14.23□□□□□ -0.13
RAB40C-202ENST00000509637 FAM171A2A8MVW0 826 aa14.22□□□□□ -0.13
RAB40C-202ENST00000509637 NPIPB8E9PQR5 432 aa14.22□□□□□ -0.13
RAB40C-202ENST00000509637 EIF1AYO14602 144 aaKnown RBP14.22□□□□□ -0.13
RAB40C-202ENST00000509637 OIP5O43482 229 aa14.22□□□□□ -0.13
RAB40C-202ENST00000509637 SS18L1O75177 396 aaPredicted RBP14.22□□□□□ -0.13
RAB40C-202ENST00000509637 COQ9O75208 318 aa14.22□□□□□ -0.13
RAB40C-202ENST00000509637 ACP2P11117 423 aa14.22□□□□□ -0.13
RAB40C-202ENST00000509637 EIF1AXP47813 144 aaKnown RBP14.22□□□□□ -0.13
RAB40C-202ENST00000509637 MRPS22P82650 360 aaKnown RBP14.22□□□□□ -0.13
RAB40C-202ENST00000509637 ZNF763Q0D2J5 394 aa14.22□□□□□ -0.13
RAB40C-202ENST00000509637 LCP2Q13094 533 aa14.22□□□□□ -0.13
RAB40C-202ENST00000509637 GANABQ14697 944 aaKnown RBP14.22□□□□□ -0.13
RAB40C-202ENST00000509637 DECR1Q16698 335 aa14.22□□□□□ -0.13
RAB40C-202ENST00000509637 EXOSC6Q5RKV6 272 aaKnown RBP14.22□□□□□ -0.13
RAB40C-202ENST00000509637 SEZ6L2Q6UXD5 910 aa14.22□□□□□ -0.13
RAB40C-202ENST00000509637 FAM110BQ8TC76 370 aa14.22□□□□□ -0.13
RAB40C-202ENST00000509637 CIDECQ96AQ7 238 aaPredicted RBP14.22□□□□□ -0.13
RAB40C-202ENST00000509637 OTUB1Q96FW1 271 aaPredicted RBP14.22□□□□□ -0.13
RAB40C-202ENST00000509637 PLPPR2Q96GM1 343 aa14.22□□□□□ -0.13
RAB40C-202ENST00000509637 MID1IP1Q9NPA3 183 aa14.22□□□□□ -0.13
RAB40C-202ENST00000509637 GIMAP4Q9NUV9 329 aa14.22□□□□□ -0.13
RAB40C-202ENST00000509637 CHD3Q12873 2000 aaKnown RBP14.21□□□□□ -0.13
RAB40C-202ENST00000509637 A0A1W2PPM1 405 aa14.21□□□□□ -0.13
RAB40C-202ENST00000509637 NKX2-2O95096 273 aa14.21□□□□□ -0.13
RAB40C-202ENST00000509637 OXSR1O95747 527 aaPredicted RBP14.21□□□□□ -0.13
RAB40C-202ENST00000509637 ENO1P06733 434 aaKnown RBP14.21□□□□□ -0.13
RAB40C-202ENST00000509637 PKNOX1P55347 436 aa14.21□□□□□ -0.13
RAB40C-202ENST00000509637 EEFSECP57772 596 aaKnown RBP14.21□□□□□ -0.13
RAB40C-202ENST00000509637 OCRLQ01968 901 aa14.21□□□□□ -0.13
RAB40C-202ENST00000509637 BEX5Q5H9J7 111 aa14.21□□□□□ -0.13
RAB40C-202ENST00000509637 SPDYAQ5MJ70 313 aa14.21□□□□□ -0.13
RAB40C-202ENST00000509637 NUFIP2Q7Z417 695 aaKnown RBP14.21□□□□□ -0.13
RAB40C-202ENST00000509637 TRIM46Q7Z4K8 759 aa14.21□□□□□ -0.13
RAB40C-202ENST00000509637 WFDC8Q8IUA0 241 aa14.21□□□□□ -0.13
RAB40C-202ENST00000509637 OR6K3Q8NGY3 331 aa14.21□□□□□ -0.13
RAB40C-202ENST00000509637 FBXO30Q8TB52 745 aa14.21□□□□□ -0.13
RAB40C-202ENST00000509637 ROBO4Q8WZ75 1007 aa14.21□□□□□ -0.13
RAB40C-202ENST00000509637 GFM2Q969S9 779 aaKnown RBP14.21□□□□□ -0.13
RAB40C-202ENST00000509637 C16orf58Q96GQ5 468 aa14.21□□□□□ -0.13
RAB40C-202ENST00000509637 FMO2Q99518 471 aa14.21□□□□□ -0.13
RAB40C-202ENST00000509637 SHCBP1LQ9BZQ2 653 aa14.21□□□□□ -0.13
RAB40C-202ENST00000509637 TMEM185BQ9H7F4 350 aa14.21□□□□□ -0.13
RAB40C-202ENST00000509637 EQTNQ9NQ60 294 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms