RNA–Protein interactions for RNA: ENST00000509043.1

HTT-205, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 380 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-205ENST00000509043 TMEM163Q8TC26 289 aa8.59□□□□□ -1.03
HTT-205ENST00000509043 DYNC2LI1Q8TCX1 351 aa8.59□□□□□ -1.03
HTT-205ENST00000509043 BRIX1Q8TDN6 353 aaKnown RBP8.59□□□□□ -1.03
HTT-205ENST00000509043 ZG16BQ96DA0 208 aa8.59□□□□□ -1.03
HTT-205ENST00000509043 ZHX1-C8orf76Q96EF9 292 aa8.59□□□□□ -1.03
HTT-205ENST00000509043 AHCYL2Q96HN2 611 aaKnown RBP8.59□□□□□ -1.03
HTT-205ENST00000509043 ALOXE3Q9BYJ1 711 aa8.59□□□□□ -1.03
HTT-205ENST00000509043 FOXQ1Q9C009 403 aa8.59□□□□□ -1.03
HTT-205ENST00000509043 TRIM2Q9C040 744 aa8.59□□□□□ -1.03
HTT-205ENST00000509043 HOXD1Q9GZZ0 328 aa8.59□□□□□ -1.03
HTT-205ENST00000509043 QRSL1Q9H0R6 528 aaKnown RBP8.59□□□□□ -1.03
HTT-205ENST00000509043 MIR1-1HGQ9H1L0 117 aa8.59□□□□□ -1.03
HTT-205ENST00000509043 TBC1D17Q9HA65 648 aa8.59□□□□□ -1.03
HTT-205ENST00000509043 FOLH1BQ9HBA9 442 aa8.59□□□□□ -1.03
HTT-205ENST00000509043 TMEM27Q9HBJ8 222 aa8.59□□□□□ -1.03
HTT-205ENST00000509043 Q9N2J8 555 aa8.59□□□□□ -1.03
HTT-205ENST00000509043 FBXO8Q9NRD0 319 aa8.59□□□□□ -1.03
HTT-205ENST00000509043 SOHLH2Q9NX45 425 aa8.59□□□□□ -1.03
HTT-205ENST00000509043 AASSQ9UDR5 926 aa8.59□□□□□ -1.03
HTT-205ENST00000509043 SEC14L4Q9UDX3 406 aa8.59□□□□□ -1.03
HTT-205ENST00000509043 DIMT1Q9UNQ2 313 aaKnown RBP8.59□□□□□ -1.03
HTT-205ENST00000509043 CFL2Q9Y281 166 aa8.59□□□□□ -1.03
HTT-205ENST00000509043 GPR55Q9Y2T6 319 aaPredicted RBP8.59□□□□□ -1.03
HTT-205ENST00000509043 CDH10Q9Y6N8 788 aa8.59□□□□□ -1.03
HTT-205ENST00000509043 MN1Q10571 1320 aaPredicted RBP8.58□□□□□ -1.04
HTT-205ENST00000509043 TMEM131Q92545 1883 aa8.58□□□□□ -1.04
HTT-205ENST00000509043 CLDN25C9JDP6 229 aa8.58□□□□□ -1.04
HTT-205ENST00000509043 M0R082 166 aa8.58□□□□□ -1.04
HTT-205ENST00000509043 TLX2O43763 284 aaPredicted RBP8.58□□□□□ -1.04
HTT-205ENST00000509043 RCBTB2O95199 551 aa8.58□□□□□ -1.04
HTT-205ENST00000509043 RAB36O95755 333 aa8.58□□□□□ -1.04
HTT-205ENST00000509043 SCG5P05408 212 aa8.58□□□□□ -1.04
HTT-205ENST00000509043 CT62P0C5K7 136 aa8.58□□□□□ -1.04
HTT-205ENST00000509043 DBTP11182 482 aaKnown RBP8.58□□□□□ -1.04
HTT-205ENST00000509043 PNLIPP16233 465 aa8.58□□□□□ -1.04
HTT-205ENST00000509043 GLB1P16278 677 aa8.58□□□□□ -1.04
HTT-205ENST00000509043 ZNF12P17014 697 aa8.58□□□□□ -1.04
HTT-205ENST00000509043 MYL12AP19105 171 aa8.58□□□□□ -1.04
HTT-205ENST00000509043 ENDOUP21128 410 aaKnown RBP8.58□□□□□ -1.04
HTT-205ENST00000509043 FUT4P22083 530 aa8.58□□□□□ -1.04
HTT-205ENST00000509043 FNTBP49356 437 aa8.58□□□□□ -1.04
HTT-205ENST00000509043 ARRB1P49407 418 aaPredicted RBP8.58□□□□□ -1.04
HTT-205ENST00000509043 ARL4DP49703 201 aa8.58□□□□□ -1.04
HTT-205ENST00000509043 EMDP50402 254 aa8.58□□□□□ -1.04
HTT-205ENST00000509043 CTBP2P56545 445 aa8.58□□□□□ -1.04
HTT-205ENST00000509043 ID2Q02363 134 aa8.58□□□□□ -1.04
HTT-205ENST00000509043 BNIP3Q12983 259 aa8.58□□□□□ -1.04
HTT-205ENST00000509043 SNAPC1Q16533 368 aa8.58□□□□□ -1.04
HTT-205ENST00000509043 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.58□□□□□ -1.04
HTT-205ENST00000509043 DEFB110Q30KQ9 67 aa8.58□□□□□ -1.04
HTT-205ENST00000509043 MINDY4Q4G0A6 757 aa8.58□□□□□ -1.04
HTT-205ENST00000509043 FLYWCH1Q4VC44 716 aa8.58□□□□□ -1.04
HTT-205ENST00000509043 ARMCX4Q5H9R4 360 aa8.58□□□□□ -1.04
HTT-205ENST00000509043 MRPL2Q5T653 305 aaKnown RBP8.58□□□□□ -1.04
HTT-205ENST00000509043 WDR74Q6RFH5 385 aaPredicted RBP8.58□□□□□ -1.04
HTT-205ENST00000509043 ZNF620Q6ZNG0 422 aa8.58□□□□□ -1.04
HTT-205ENST00000509043 PRICKLE2Q7Z3G6 844 aa8.58□□□□□ -1.04
HTT-205ENST00000509043 PRSS42Q7Z5A4 293 aa8.58□□□□□ -1.04
HTT-205ENST00000509043 ADCK1Q86TW2 530 aa8.58□□□□□ -1.04
HTT-205ENST00000509043 SLCO6A1Q86UG4 719 aa8.58□□□□□ -1.04
HTT-205ENST00000509043 SLITRK4Q8IW52 837 aa8.58□□□□□ -1.04
HTT-205ENST00000509043 LSMEM1Q8N8F7 131 aa8.58□□□□□ -1.04
HTT-205ENST00000509043 OR2T33Q8NG76 320 aa8.58□□□□□ -1.04
HTT-205ENST00000509043 FGF11Q92914 225 aa8.58□□□□□ -1.04
HTT-205ENST00000509043 MMABQ96EY8 250 aaPredicted RBP8.58□□□□□ -1.04
HTT-205ENST00000509043 PLEKHA8Q96JA3 519 aa8.58□□□□□ -1.04
HTT-205ENST00000509043 LRR1Q96L50 414 aa8.58□□□□□ -1.04
HTT-205ENST00000509043 VSTM2LQ96N03 204 aa8.58□□□□□ -1.04
HTT-205ENST00000509043 LRFN5Q96NI6 719 aa8.58□□□□□ -1.04
HTT-205ENST00000509043 TGM7Q96PF1 710 aa8.58□□□□□ -1.04
HTT-205ENST00000509043 IL4I1Q96RQ9 567 aa8.58□□□□□ -1.04
HTT-205ENST00000509043 MGLLQ99685 303 aa8.58□□□□□ -1.04
HTT-205ENST00000509043 RHNO1Q9BSD3 238 aa8.58□□□□□ -1.04
HTT-205ENST00000509043 TSSK6Q9BXA6 273 aa8.58□□□□□ -1.04
HTT-205ENST00000509043 MMP27Q9H306 513 aa8.58□□□□□ -1.04
HTT-205ENST00000509043 FN3KQ9H479 309 aa8.58□□□□□ -1.04
HTT-205ENST00000509043 ANKRA2Q9H9E1 313 aa8.58□□□□□ -1.04
HTT-205ENST00000509043 FGF20Q9NP95 211 aaPredicted RBP8.58□□□□□ -1.04
HTT-205ENST00000509043 TMEM74BQ9NUR3 256 aa8.58□□□□□ -1.04
HTT-205ENST00000509043 CHCHD3Q9NX63 227 aaKnown RBP8.58□□□□□ -1.04
HTT-205ENST00000509043 TVP23BQ9NYZ1 205 aa8.58□□□□□ -1.04
HTT-205ENST00000509043 CCDC59Q9P031 241 aaKnown RBP8.58□□□□□ -1.04
HTT-205ENST00000509043 LRIT1Q9P2V4 623 aa8.58□□□□□ -1.04
HTT-205ENST00000509043 OSGIN1Q9UJX0 560 aa8.58□□□□□ -1.04
HTT-205ENST00000509043 MRTO4Q9UKD2 239 aaKnown RBP8.58□□□□□ -1.04
HTT-205ENST00000509043 SLC7A7Q9UM01 511 aa8.58□□□□□ -1.04
HTT-205ENST00000509043 BAIAP2Q9UQB8 552 aa8.58□□□□□ -1.04
HTT-205ENST00000509043 EXOSC1Q9Y3B2 195 aaKnown RBP8.58□□□□□ -1.04
HTT-205ENST00000509043 SLCO1B1Q9Y6L6 691 aa8.58□□□□□ -1.04
HTT-205ENST00000509043 BRWD1Q9NSI6 2320 aa8.58□□□□□ -1.04
HTT-205ENST00000509043 ARHGEF17Q96PE2 2063 aaPredicted RBP8.57□□□□□ -1.04
HTT-205ENST00000509043 RANBP2P49792 3224 aaKnown RBP8.57□□□□□ -1.04
HTT-205ENST00000509043 IGHV1OR21-1A0A087WYE8 117 aa8.57□□□□□ -1.04
HTT-205ENST00000509043 TMEM129A0AVI4 362 aa8.57□□□□□ -1.04
HTT-205ENST00000509043 UNC119BA6NIH7 251 aa8.57□□□□□ -1.04
HTT-205ENST00000509043 EFCAB7A8K855 629 aa8.57□□□□□ -1.04
HTT-205ENST00000509043 KDM4EB2RXH2 506 aaPredicted RBP8.57□□□□□ -1.04
HTT-205ENST00000509043 TMEM150CB9EJG8 249 aa8.57□□□□□ -1.04
HTT-205ENST00000509043 K7ESF4 209 aa8.57□□□□□ -1.04
HTT-205ENST00000509043 MYL12BO14950 172 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms