RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 PIGVQ9NUD9 493 aa3.67□□□□□ -1.82
NEDD4-209ENST00000508871 INTS9Q9NV88 658 aaKnown RBP3.67□□□□□ -1.82
NEDD4-209ENST00000508871 ENOPH1Q9UHY7 261 aa3.67□□□□□ -1.82
NEDD4-209ENST00000508871 MROH7Q68CQ1 1323 aa3.67□□□□□ -1.82
NEDD4-209ENST00000508871 ZNF233A6NK53 670 aa3.67□□□□□ -1.82
NEDD4-209ENST00000508871 E7ESA3 106 aa3.67□□□□□ -1.82
NEDD4-209ENST00000508871 SLC28A1O00337 649 aa3.67□□□□□ -1.82
NEDD4-209ENST00000508871 NDUFS4O43181 175 aa3.67□□□□□ -1.82
NEDD4-209ENST00000508871 CACNG3O60359 315 aa3.67□□□□□ -1.82
NEDD4-209ENST00000508871 SEC24AO95486 1093 aa3.67□□□□□ -1.82
NEDD4-209ENST00000508871 GPIP06744 558 aa3.67□□□□□ -1.82
NEDD4-209ENST00000508871 ATP5C1P36542 298 aaKnown RBP3.67□□□□□ -1.82
NEDD4-209ENST00000508871 BMPR1AP36894 532 aa3.67□□□□□ -1.82
NEDD4-209ENST00000508871 CTSKP43235 329 aa3.67□□□□□ -1.82
NEDD4-209ENST00000508871 GPR4P46093 362 aa3.67□□□□□ -1.82
NEDD4-209ENST00000508871 CDKN1BP46527 198 aa3.67□□□□□ -1.82
NEDD4-209ENST00000508871 AGTR2P50052 363 aa3.67□□□□□ -1.82
NEDD4-209ENST00000508871 ARHGAP1Q07960 439 aa3.67□□□□□ -1.82
NEDD4-209ENST00000508871 SNRNP35Q16560 246 aaKnown RBP3.67□□□□□ -1.82
NEDD4-209ENST00000508871 MOGAT2Q3SYC2 334 aa3.67□□□□□ -1.82
NEDD4-209ENST00000508871 TEDDM1Q5T9Z0 273 aa3.67□□□□□ -1.82
NEDD4-209ENST00000508871 FAM71F2Q6NXP2 309 aa3.67□□□□□ -1.82
NEDD4-209ENST00000508871 FAM122CQ6P4D5 195 aa3.67□□□□□ -1.82
NEDD4-209ENST00000508871 GDPD4Q6W3E5 623 aa3.67□□□□□ -1.82
NEDD4-209ENST00000508871 NAPRTQ6XQN6 538 aa3.67□□□□□ -1.82
NEDD4-209ENST00000508871 ZNF841Q6ZN19 808 aa3.67□□□□□ -1.82
NEDD4-209ENST00000508871 C17orf107Q6ZR85 190 aa3.67□□□□□ -1.82
NEDD4-209ENST00000508871 IRF2BP2Q7Z5L9 587 aa3.67□□□□□ -1.82
NEDD4-209ENST00000508871 BMP8AQ7Z5Y6 402 aa3.67□□□□□ -1.82
NEDD4-209ENST00000508871 GPR135Q8IZ08 494 aa3.67□□□□□ -1.82
NEDD4-209ENST00000508871 ZNF248Q8NDW4 579 aa3.67□□□□□ -1.82
NEDD4-209ENST00000508871 DMBX1Q8NFW5 382 aa3.67□□□□□ -1.82
NEDD4-209ENST00000508871 OR6M1Q8NGM8 313 aa3.67□□□□□ -1.82
NEDD4-209ENST00000508871 MBD3L2Q8NHZ7 208 aaPredicted RBP3.67□□□□□ -1.82
NEDD4-209ENST00000508871 MYLPFQ96A32 169 aa3.67□□□□□ -1.82
NEDD4-209ENST00000508871 TMEM186Q96B77 213 aa3.67□□□□□ -1.82
NEDD4-209ENST00000508871 TMEM159Q96B96 161 aa3.67□□□□□ -1.82
NEDD4-209ENST00000508871 MDFIQ99750 246 aa3.67□□□□□ -1.82
NEDD4-209ENST00000508871 RBKSQ9H477 322 aa3.67□□□□□ -1.82
NEDD4-209ENST00000508871 NXF3Q9H4D5 531 aaKnown RBP3.67□□□□□ -1.82
NEDD4-209ENST00000508871 RHOFQ9HBH0 211 aa3.67□□□□□ -1.82
NEDD4-209ENST00000508871 RLIMQ9NVW2 624 aa3.67□□□□□ -1.82
NEDD4-209ENST00000508871 EBF1Q9UH73 591 aa3.67□□□□□ -1.82
NEDD4-209ENST00000508871 ST6GALNAC2Q9UJ37 374 aa3.67□□□□□ -1.82
NEDD4-209ENST00000508871 REXO2Q9Y3B8 237 aaKnown RBP3.67□□□□□ -1.82
NEDD4-209ENST00000508871 A0A1W2PQ45 241 aaPredicted RBP3.66□□□□□ -1.82
NEDD4-209ENST00000508871 A0A1W2PQY0 241 aa3.66□□□□□ -1.82
NEDD4-209ENST00000508871 SLC16A4O15374 487 aa3.66□□□□□ -1.82
NEDD4-209ENST00000508871 ENTPD5O75356 428 aa3.66□□□□□ -1.82
NEDD4-209ENST00000508871 DDAH2O95865 285 aa3.66□□□□□ -1.82
NEDD4-209ENST00000508871 MPIG6BO95866 241 aa3.66□□□□□ -1.82
NEDD4-209ENST00000508871 MT-ND1P03886 318 aa3.66□□□□□ -1.82
NEDD4-209ENST00000508871 LCN1P31025 176 aa3.66□□□□□ -1.82
NEDD4-209ENST00000508871 OGDHQ02218 1023 aa3.66□□□□□ -1.82
NEDD4-209ENST00000508871 CNTN2Q02246 1040 aa3.66□□□□□ -1.82
NEDD4-209ENST00000508871 PCOLCEQ15113 449 aa3.66□□□□□ -1.82
NEDD4-209ENST00000508871 TRMT5Q32P41 509 aaKnown RBP3.66□□□□□ -1.82
NEDD4-209ENST00000508871 SLC27A4Q6P1M0 643 aa3.66□□□□□ -1.82
NEDD4-209ENST00000508871 CXXC5Q7LFL8 322 aaKnown RBP3.66□□□□□ -1.82
NEDD4-209ENST00000508871 IFNEQ86WN2 208 aa3.66□□□□□ -1.82
NEDD4-209ENST00000508871 MMGT1Q8N4V1 131 aa3.66□□□□□ -1.82
NEDD4-209ENST00000508871 OR2G2Q8NGZ5 317 aa3.66□□□□□ -1.82
NEDD4-209ENST00000508871 CFHR4Q92496 578 aa3.66□□□□□ -1.82
NEDD4-209ENST00000508871 C1orf159Q96HA4 380 aa3.66□□□□□ -1.82
NEDD4-209ENST00000508871 IL4I1Q96RQ9 567 aa3.66□□□□□ -1.82
NEDD4-209ENST00000508871 GINS4Q9BRT9 223 aa3.66□□□□□ -1.82
NEDD4-209ENST00000508871 CIPCQ9C0C6 399 aa3.66□□□□□ -1.82
NEDD4-209ENST00000508871 CTSFQ9UBX1 484 aa3.66□□□□□ -1.82
NEDD4-209ENST00000508871 CFL2Q9Y281 166 aa3.66□□□□□ -1.82
NEDD4-209ENST00000508871 TMED7Q9Y3B3 224 aa3.66□□□□□ -1.82
NEDD4-209ENST00000508871 PLSCR5A0PG75 271 aa3.66□□□□□ -1.82
NEDD4-209ENST00000508871 LRRC3CA6NJW4 275 aa3.66□□□□□ -1.82
NEDD4-209ENST00000508871 ADAMDEC1O15204 470 aa3.66□□□□□ -1.82
NEDD4-209ENST00000508871 LPXNO60711 386 aa3.66□□□□□ -1.82
NEDD4-209ENST00000508871 CCNKO75909 580 aa3.66□□□□□ -1.82
NEDD4-209ENST00000508871 ALX3O95076 343 aa3.66□□□□□ -1.82
NEDD4-209ENST00000508871 LSM8O95777 96 aaKnown RBP3.66□□□□□ -1.82
NEDD4-209ENST00000508871 RPN2P04844 631 aa3.66□□□□□ -1.82
NEDD4-209ENST00000508871 IFNW1P05000 195 aa3.66□□□□□ -1.82
NEDD4-209ENST00000508871 IFNA6P05013 189 aa3.66□□□□□ -1.82
NEDD4-209ENST00000508871 IFNA16P05015 189 aa3.66□□□□□ -1.82
NEDD4-209ENST00000508871 C2P06681 752 aa3.66□□□□□ -1.82
NEDD4-209ENST00000508871 CTSBP07858 339 aa3.66□□□□□ -1.82
NEDD4-209ENST00000508871 MMP3P08254 477 aa3.66□□□□□ -1.82
NEDD4-209ENST00000508871 SERPINF2P08697 491 aa3.66□□□□□ -1.82
NEDD4-209ENST00000508871 MATN1P21941 496 aa3.66□□□□□ -1.82
NEDD4-209ENST00000508871 PCMT1P22061 227 aa3.66□□□□□ -1.82
NEDD4-209ENST00000508871 CYP2C18P33260 490 aa3.66□□□□□ -1.82
NEDD4-209ENST00000508871 CSNK1EP49674 416 aaKnown RBP3.66□□□□□ -1.82
NEDD4-209ENST00000508871 GPM6AP51674 278 aa3.66□□□□□ -1.82
NEDD4-209ENST00000508871 TAF1AQ15573 450 aaPredicted RBP3.66□□□□□ -1.82
NEDD4-209ENST00000508871 C6orf136Q5SQH8 315 aa3.66□□□□□ -1.82
NEDD4-209ENST00000508871 KIRREL2Q6UWL6 708 aa3.66□□□□□ -1.82
NEDD4-209ENST00000508871 OR51D1Q8NGF3 324 aa3.66□□□□□ -1.82
NEDD4-209ENST00000508871 OR1L6Q8NGR2 347 aa3.66□□□□□ -1.82
NEDD4-209ENST00000508871 OR2AJ1Q8NGZ0 328 aa3.66□□□□□ -1.82
NEDD4-209ENST00000508871 TMPRSS13Q9BYE2 586 aa3.66□□□□□ -1.82
NEDD4-209ENST00000508871 IFT46Q9NQC8 304 aa3.66□□□□□ -1.82
NEDD4-209ENST00000508871 FSCN3Q9NQT6 498 aa3.66□□□□□ -1.82
NEDD4-209ENST00000508871 PADI1Q9ULC6 663 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms