RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 HUS1O60921 280 aa6.92□□□□□ -1.3
PDGFRA-206ENST00000508170 CTNSO60931 367 aa6.92□□□□□ -1.3
PDGFRA-206ENST00000508170 GATBO75879 557 aaKnown RBP6.92□□□□□ -1.3
PDGFRA-206ENST00000508170 SCGNO76038 276 aa6.92□□□□□ -1.3
PDGFRA-206ENST00000508170 TAL1P17542 331 aaPredicted RBP6.92□□□□□ -1.3
PDGFRA-206ENST00000508170 RAB6AP20340 208 aa6.92□□□□□ -1.3
PDGFRA-206ENST00000508170 DUSP3P51452 185 aaPredicted RBP6.92□□□□□ -1.3
PDGFRA-206ENST00000508170 CDR2Q01850 454 aa6.92□□□□□ -1.3
PDGFRA-206ENST00000508170 GRIK2Q13002 908 aa6.92□□□□□ -1.3
PDGFRA-206ENST00000508170 GRB14Q14449 540 aa6.92□□□□□ -1.3
PDGFRA-206ENST00000508170 MTF1Q14872 753 aa6.92□□□□□ -1.3
PDGFRA-206ENST00000508170 GPNMBQ14956 572 aa6.92□□□□□ -1.3
PDGFRA-206ENST00000508170 RNF151Q2KHN1 245 aa6.92□□□□□ -1.3
PDGFRA-206ENST00000508170 TSTD2Q5T7W7 516 aa6.92□□□□□ -1.3
PDGFRA-206ENST00000508170 CD164L2Q6UWJ8 174 aa6.92□□□□□ -1.3
PDGFRA-206ENST00000508170 CENPUQ71F23 418 aa6.92□□□□□ -1.3
PDGFRA-206ENST00000508170 ERICH1Q86X53 443 aa6.92□□□□□ -1.3
PDGFRA-206ENST00000508170 MMAAQ8IVH4 418 aaKnown RBP6.92□□□□□ -1.3
PDGFRA-206ENST00000508170 APLFQ8IW19 511 aaPredicted RBP6.92□□□□□ -1.3
PDGFRA-206ENST00000508170 FGFRL1Q8N441 504 aa6.92□□□□□ -1.3
PDGFRA-206ENST00000508170 KYQ8NBH2 561 aa6.92□□□□□ -1.3
PDGFRA-206ENST00000508170 C2CD4AQ8NCU7 369 aaPredicted RBP6.92□□□□□ -1.3
PDGFRA-206ENST00000508170 C22orf15Q8WYQ4 148 aa6.92□□□□□ -1.3
PDGFRA-206ENST00000508170 SCARF2Q96GP6 870 aaPredicted RBP6.92□□□□□ -1.3
PDGFRA-206ENST00000508170 WFIKKN1Q96NZ8 548 aa6.92□□□□□ -1.3
PDGFRA-206ENST00000508170 FYTTD1Q96QD9 318 aaKnown RBP6.92□□□□□ -1.3
PDGFRA-206ENST00000508170 TEAD3Q99594 435 aa6.92□□□□□ -1.3
PDGFRA-206ENST00000508170 DCUN1D5Q9BTE7 237 aa6.92□□□□□ -1.3
PDGFRA-206ENST00000508170 C1QTNF7Q9BXJ2 289 aa6.92□□□□□ -1.3
PDGFRA-206ENST00000508170 HOXD1Q9GZZ0 328 aa6.92□□□□□ -1.3
PDGFRA-206ENST00000508170 CDCP1Q9H5V8 836 aa6.92□□□□□ -1.3
PDGFRA-206ENST00000508170 IL1RL2Q9HB29 575 aa6.92□□□□□ -1.3
PDGFRA-206ENST00000508170 RGS12O14924 1447 aa6.92□□□□□ -1.3
PDGFRA-206ENST00000508170 ADAMTS13Q76LX8 1427 aa6.92□□□□□ -1.3
PDGFRA-206ENST00000508170 RGPD1P0DJD0 1748 aa6.92□□□□□ -1.3
PDGFRA-206ENST00000508170 A0A1W2PNV4 684 aa6.92□□□□□ -1.3
PDGFRA-206ENST00000508170 SH3PXD2BA1X283 911 aa6.92□□□□□ -1.3
PDGFRA-206ENST00000508170 CCT8L1PA6NM43 557 aa6.92□□□□□ -1.3
PDGFRA-206ENST00000508170 HAX1O00165 279 aa6.92□□□□□ -1.3
PDGFRA-206ENST00000508170 BTN3A3O00478 584 aa6.92□□□□□ -1.3
PDGFRA-206ENST00000508170 CFLARO15519 480 aa6.92□□□□□ -1.3
PDGFRA-206ENST00000508170 SC5DO75845 299 aa6.92□□□□□ -1.3
PDGFRA-206ENST00000508170 GSRP00390 522 aa6.92□□□□□ -1.3
PDGFRA-206ENST00000508170 PET100P0DJ07 73 aa6.92□□□□□ -1.3
PDGFRA-206ENST00000508170 PCK1P35558 622 aa6.92□□□□□ -1.3
PDGFRA-206ENST00000508170 COMPP49747 757 aaPredicted RBP6.92□□□□□ -1.3
PDGFRA-206ENST00000508170 PKNOX1P55347 436 aa6.92□□□□□ -1.3
PDGFRA-206ENST00000508170 TAS2R60P59551 318 aa6.92□□□□□ -1.3
PDGFRA-206ENST00000508170 FKBP1BP68106 108 aa6.92□□□□□ -1.3
PDGFRA-206ENST00000508170 DHODHQ02127 395 aa6.92□□□□□ -1.3
PDGFRA-206ENST00000508170 DLX2Q07687 328 aaPredicted RBP6.92□□□□□ -1.3
PDGFRA-206ENST00000508170 AQP6Q13520 282 aa6.92□□□□□ -1.3
PDGFRA-206ENST00000508170 ARL6IP1Q15041 203 aa6.92□□□□□ -1.3
PDGFRA-206ENST00000508170 CYTH1Q15438 398 aa6.92□□□□□ -1.3
PDGFRA-206ENST00000508170 KCTD19Q17RG1 926 aaPredicted RBP6.92□□□□□ -1.3
PDGFRA-206ENST00000508170 LY6KQ17RY6 165 aa6.92□□□□□ -1.3
PDGFRA-206ENST00000508170 RNF111Q6ZNA4 994 aa6.92□□□□□ -1.3
PDGFRA-206ENST00000508170 CHSY1Q86X52 802 aa6.92□□□□□ -1.3
PDGFRA-206ENST00000508170 PTOV1Q86YD1 416 aa6.92□□□□□ -1.3
PDGFRA-206ENST00000508170 BBS7Q8IWZ6 715 aa6.92□□□□□ -1.3
PDGFRA-206ENST00000508170 SLC35F3Q8IY50 421 aa6.92□□□□□ -1.3
PDGFRA-206ENST00000508170 STK40Q8N2I9 435 aa6.92□□□□□ -1.3
PDGFRA-206ENST00000508170 ZNF808Q8N4W9 903 aaPredicted RBP6.92□□□□□ -1.3
PDGFRA-206ENST00000508170 FBXL6Q8N531 539 aa6.92□□□□□ -1.3
PDGFRA-206ENST00000508170 B3GNT7Q8NFL0 401 aa6.92□□□□□ -1.3
PDGFRA-206ENST00000508170 BORCS5Q969J3 196 aa6.92□□□□□ -1.3
PDGFRA-206ENST00000508170 ZFP42Q96MM3 310 aa6.92□□□□□ -1.3
PDGFRA-206ENST00000508170 ZNF570Q96NI8 536 aa6.92□□□□□ -1.3
PDGFRA-206ENST00000508170 TMEM79Q9BSE2 394 aa6.92□□□□□ -1.3
PDGFRA-206ENST00000508170 C10orf88Q9H8K7 445 aa6.92□□□□□ -1.3
PDGFRA-206ENST00000508170 ATP10DQ9P241 1426 aa6.92□□□□□ -1.3
PDGFRA-206ENST00000508170 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.92□□□□□ -1.3
PDGFRA-206ENST00000508170 SAE1Q9UBE0 346 aaPredicted RBP6.92□□□□□ -1.3
PDGFRA-206ENST00000508170 ABT1Q9ULW3 272 aaKnown RBP6.92□□□□□ -1.3
PDGFRA-206ENST00000508170 PYCARDQ9ULZ3 195 aa6.92□□□□□ -1.3
PDGFRA-206ENST00000508170 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.92□□□□□ -1.3
PDGFRA-206ENST00000508170 POLR3HQ9Y535 204 aaPredicted RBP6.92□□□□□ -1.3
PDGFRA-206ENST00000508170 SLC22A7Q9Y694 548 aa6.92□□□□□ -1.3
PDGFRA-206ENST00000508170 PTPRCP08575 1304 aa6.91□□□□□ -1.3
PDGFRA-206ENST00000508170 USP6P35125 1406 aa6.91□□□□□ -1.3
PDGFRA-206ENST00000508170 A0A1W2PPE3 182 aa6.91□□□□□ -1.3
PDGFRA-206ENST00000508170 A0A1W2PPK0 400 aa6.91□□□□□ -1.3
PDGFRA-206ENST00000508170 CXorf49A8MYA2 514 aaPredicted RBP6.91□□□□□ -1.3
PDGFRA-206ENST00000508170 CLDN5O00501 218 aa6.91□□□□□ -1.3
PDGFRA-206ENST00000508170 VNN1O95497 513 aa6.91□□□□□ -1.3
PDGFRA-206ENST00000508170 SFTPBP07988 381 aa6.91□□□□□ -1.3
PDGFRA-206ENST00000508170 MELTFP08582 738 aa6.91□□□□□ -1.3
PDGFRA-206ENST00000508170 CBSLP0DN79 551 aa6.91□□□□□ -1.3
PDGFRA-206ENST00000508170 HSPD1P10809 573 aaKnown RBP6.91□□□□□ -1.3
PDGFRA-206ENST00000508170 HLA-GP17693 338 aa6.91□□□□□ -1.3
PDGFRA-206ENST00000508170 ZP3P21754 424 aa6.91□□□□□ -1.3
PDGFRA-206ENST00000508170 RPL10P27635 214 aaKnown RBP6.91□□□□□ -1.3
PDGFRA-206ENST00000508170 GABRR2P28476 465 aa6.91□□□□□ -1.3
PDGFRA-206ENST00000508170 CALCRP30988 508 aa6.91□□□□□ -1.3
PDGFRA-206ENST00000508170 CBSP35520 551 aa6.91□□□□□ -1.3
PDGFRA-206ENST00000508170 CDK9P50750 372 aaKnown RBP6.91□□□□□ -1.3
PDGFRA-206ENST00000508170 MAPK12P53778 367 aa6.91□□□□□ -1.3
PDGFRA-206ENST00000508170 HMGCS2P54868 508 aa6.91□□□□□ -1.3
PDGFRA-206ENST00000508170 CDK3Q00526 305 aa6.91□□□□□ -1.3
PDGFRA-206ENST00000508170 E2F1Q01094 437 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms