RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 HCFC1P51610 2035 aa2.59□□□□□ -2
LSM6-205ENST00000507449 SAGE2PA6NJ88 616 aa2.58□□□□□ -2
LSM6-205ENST00000507449 FAM74A7A6NL05 159 aa2.58□□□□□ -2
LSM6-205ENST00000507449 A8MX80 341 aa2.58□□□□□ -2
LSM6-205ENST00000507449 PHOX2AO14813 284 aa2.58□□□□□ -2
LSM6-205ENST00000507449 CTAGE5O15320 804 aa2.58□□□□□ -2
LSM6-205ENST00000507449 JAK2O60674 1132 aa2.58□□□□□ -2
LSM6-205ENST00000507449 PEX11AO75192 247 aa2.58□□□□□ -2
LSM6-205ENST00000507449 B3GAT3O94766 335 aa2.58□□□□□ -2
LSM6-205ENST00000507449 OPN1LWP04000 364 aa2.58□□□□□ -2
LSM6-205ENST00000507449 TNNI3P19429 210 aa2.58□□□□□ -2
LSM6-205ENST00000507449 DRD5P21918 477 aa2.58□□□□□ -2
LSM6-205ENST00000507449 IGHV1-2P23083 117 aa2.58□□□□□ -2
LSM6-205ENST00000507449 MAGEA9P43362 315 aa2.58□□□□□ -2
LSM6-205ENST00000507449 NOVA1P51513 510 aaKnown RBP2.58□□□□□ -2
LSM6-205ENST00000507449 NAPAP54920 295 aa2.58□□□□□ -2
LSM6-205ENST00000507449 RPL8P62917 257 aaKnown RBP2.58□□□□□ -2
LSM6-205ENST00000507449 CNTN2Q02246 1040 aa2.58□□□□□ -2
LSM6-205ENST00000507449 PUDPQ08623 228 aa2.58□□□□□ -2
LSM6-205ENST00000507449 PEX6Q13608 980 aa2.58□□□□□ -2
LSM6-205ENST00000507449 CAMK4Q16566 473 aa2.58□□□□□ -2
LSM6-205ENST00000507449 USH1GQ495M9 461 aa2.58□□□□□ -2
LSM6-205ENST00000507449 FAM74A3Q4VXF1 159 aa2.58□□□□□ -2
LSM6-205ENST00000507449 PAN3Q58A45 887 aaKnown RBP2.58□□□□□ -2
LSM6-205ENST00000507449 HSP90AA5PQ58FG0 334 aa2.58□□□□□ -2
LSM6-205ENST00000507449 SLC25A30Q5SVS4 291 aa2.58□□□□□ -2
LSM6-205ENST00000507449 CELF3Q5SZQ8 465 aaKnown RBP2.58□□□□□ -2
LSM6-205ENST00000507449 LCE3CQ5T5A8 94 aa2.58□□□□□ -2
LSM6-205ENST00000507449 NCR3LG1Q68D85 454 aa2.58□□□□□ -2
LSM6-205ENST00000507449 PVRIGQ6DKI7 326 aa2.58□□□□□ -2
LSM6-205ENST00000507449 GALNT17Q6IS24 598 aa2.58□□□□□ -2
LSM6-205ENST00000507449 SLC25A24Q6NUK1 477 aa2.58□□□□□ -2
LSM6-205ENST00000507449 Q6ZR54 194 aa2.58□□□□□ -2
LSM6-205ENST00000507449 ANKRD37Q7Z713 158 aa2.58□□□□□ -2
LSM6-205ENST00000507449 CENPLQ8N0S6 344 aaPredicted RBP2.58□□□□□ -2
LSM6-205ENST00000507449 LINC00612Q8N6U2 182 aa2.58□□□□□ -2
LSM6-205ENST00000507449 Q8N9G6 341 aaPredicted RBP2.58□□□□□ -2
LSM6-205ENST00000507449 OR2T34Q8NGX1 318 aa2.58□□□□□ -2
LSM6-205ENST00000507449 RHOXF1Q8NHV9 184 aa2.58□□□□□ -2
LSM6-205ENST00000507449 PNNQ9H307 717 aaKnown RBP2.58□□□□□ -2
LSM6-205ENST00000507449 DHX33Q9H6R0 707 aaKnown RBP2.58□□□□□ -2
LSM6-205ENST00000507449 MIEF1Q9NQG6 463 aa2.58□□□□□ -2
LSM6-205ENST00000507449 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP2.58□□□□□ -2
LSM6-205ENST00000507449 SLC7A10Q9NS82 523 aa2.58□□□□□ -2
LSM6-205ENST00000507449 EHFQ9NZC4 300 aa2.58□□□□□ -2
LSM6-205ENST00000507449 CGNQ9P2M7 1197 aaKnown RBP2.58□□□□□ -2
LSM6-205ENST00000507449 RSPH14Q9UHP6 348 aa2.58□□□□□ -2
LSM6-205ENST00000507449 LAMP5Q9UJQ1 280 aa2.58□□□□□ -2
LSM6-205ENST00000507449 ANAPC7Q9UJX3 599 aa2.58□□□□□ -2
LSM6-205ENST00000507449 CHMP2BQ9UQN3 213 aa2.58□□□□□ -2
LSM6-205ENST00000507449 SF3B1O75533 1304 aaKnown RBP eCLIP2.58□□□□□ -2
LSM6-205ENST00000507449 STX11O75558 287 aa2.57□□□□□ -2
LSM6-205ENST00000507449 TM7SF2O76062 418 aa2.57□□□□□ -2
LSM6-205ENST00000507449 NOL4O94818 638 aa2.57□□□□□ -2
LSM6-205ENST00000507449 UFL1O94874 794 aa2.57□□□□□ -2
LSM6-205ENST00000507449 DUSP14O95147 198 aaKnown RBP2.57□□□□□ -2
LSM6-205ENST00000507449 IGF1P05019 195 aa2.57□□□□□ -2
LSM6-205ENST00000507449 KRT8P05787 483 aa2.57□□□□□ -2
LSM6-205ENST00000507449 ASNSP08243 561 aa2.57□□□□□ -2
LSM6-205ENST00000507449 HSPA5P11021 654 aaKnown RBP2.57□□□□□ -2
LSM6-205ENST00000507449 KRT13P13646 458 aa2.57□□□□□ -2
LSM6-205ENST00000507449 PGAM2P15259 253 aa2.57□□□□□ -2
LSM6-205ENST00000507449 HTR2AP28223 471 aa2.57□□□□□ -2
LSM6-205ENST00000507449 CDH5P33151 784 aaPredicted RBP2.57□□□□□ -2
LSM6-205ENST00000507449 CA8P35219 290 aa2.57□□□□□ -2
LSM6-205ENST00000507449 MDH2P40926 338 aaKnown RBP2.57□□□□□ -2
LSM6-205ENST00000507449 BDKRB1P46663 353 aa2.57□□□□□ -2
LSM6-205ENST00000507449 RPL34P49207 117 aaKnown RBP2.57□□□□□ -2
LSM6-205ENST00000507449 EMDP50402 254 aa2.57□□□□□ -2
LSM6-205ENST00000507449 ZNF154Q13106 437 aa2.57□□□□□ -2
LSM6-205ENST00000507449 CYP51A1Q16850 503 aa2.57□□□□□ -2
LSM6-205ENST00000507449 CENPUQ71F23 418 aa2.57□□□□□ -2
LSM6-205ENST00000507449 P2RY8Q86VZ1 359 aa2.57□□□□□ -2
LSM6-205ENST00000507449 ERICH1Q86X53 443 aa2.57□□□□□ -2
LSM6-205ENST00000507449 C9orf40Q8IXQ3 194 aa2.57□□□□□ -2
LSM6-205ENST00000507449 OR2T33Q8NG76 320 aa2.57□□□□□ -2
LSM6-205ENST00000507449 OR9A4Q8NGU2 314 aa2.57□□□□□ -2
LSM6-205ENST00000507449 OR10T2Q8NGX3 314 aa2.57□□□□□ -2
LSM6-205ENST00000507449 MRAPQ8TCY5 172 aa2.57□□□□□ -2
LSM6-205ENST00000507449 RAB7BQ96AH8 199 aa2.57□□□□□ -2
LSM6-205ENST00000507449 VSIG2Q96IQ7 327 aa2.57□□□□□ -2
LSM6-205ENST00000507449 GSDMCQ9BYG8 508 aa2.57□□□□□ -2
LSM6-205ENST00000507449 NFKBIZQ9BYH8 718 aa2.57□□□□□ -2
LSM6-205ENST00000507449 PALMDQ9NP74 551 aa2.57□□□□□ -2
LSM6-205ENST00000507449 TMOD2Q9NZR1 351 aa2.57□□□□□ -2
LSM6-205ENST00000507449 SENP1Q9P0U3 644 aa2.57□□□□□ -2
LSM6-205ENST00000507449 CYTH4Q9UIA0 394 aa2.57□□□□□ -2
LSM6-205ENST00000507449 SMC3Q9UQE7 1217 aa2.57□□□□□ -2
LSM6-205ENST00000507449 L3MBTL1Q9Y468 752 aa2.57□□□□□ -2
LSM6-205ENST00000507449 GMPPBQ9Y5P6 360 aa2.57□□□□□ -2
LSM6-205ENST00000507449 USP6P35125 1406 aa2.57□□□□□ -2
LSM6-205ENST00000507449 ERI2A8K979 691 aaKnown RBP2.56□□□□□ -2
LSM6-205ENST00000507449 MAPK13O15264 365 aa2.56□□□□□ -2
LSM6-205ENST00000507449 STX7O15400 261 aaKnown RBP2.56□□□□□ -2
LSM6-205ENST00000507449 OR1F1O43749 312 aa2.56□□□□□ -2
LSM6-205ENST00000507449 NUDT21O43809 227 aaKnown RBP2.56□□□□□ -2
LSM6-205ENST00000507449 PCCBP05166 539 aa2.56□□□□□ -2
LSM6-205ENST00000507449 TSPY4P0CV99 314 aa2.56□□□□□ -2
LSM6-205ENST00000507449 TSPY10P0CW01 314 aa2.56□□□□□ -2
LSM6-205ENST00000507449 EPB41P11171 864 aaKnown RBP2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms